Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 MIR548O-201ENST00000408583 114 ntBASIC1.52□□□□□ -2.17
LIN7CQ9NUP9 snoU13.15-201ENST00000459407 104 ntBASIC1.52□□□□□ -2.17
LIN7CQ9NUP9 RNU6-138P-201ENST00000515952 107 ntBASIC1.52□□□□□ -2.17
LIN7CQ9NUP9 RNU7-25P-201ENST00000516544 62 ntBASIC1.52□□□□□ -2.17
LIN7CQ9NUP9 RNU6-126P-201ENST00000516685 103 ntBASIC1.52□□□□□ -2.17
LIN7CQ9NUP9 AC109810.1-201ENST00000534066 224 ntBASIC1.52□□□□□ -2.17
LIN7CQ9NUP9 AC090425.1-201ENST00000610007 140 ntBASIC1.52□□□□□ -2.17
LIN7CQ9NUP9 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.52□□□□□ -2.17
LIN7CQ9NUP9 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
LIN7CQ9NUP9 Y_RNA.634-201ENST00000364811 113 ntBASIC1.51□□□□□ -2.17
LIN7CQ9NUP9 MIR15B-201ENST00000385045 98 ntBASIC1.51□□□□□ -2.17
LIN7CQ9NUP9 AL445685.2-201ENST00000422551 342 ntBASIC1.51□□□□□ -2.17
LIN7CQ9NUP9 AL121914.1-201ENST00000450188 156 ntBASIC1.51□□□□□ -2.17
LIN7CQ9NUP9 Y_RNA.644-201ENST00000459006 113 ntBASIC1.51□□□□□ -2.17
LIN7CQ9NUP9 snoU13.26-201ENST00000459452 105 ntBASIC1.51□□□□□ -2.17
LIN7CQ9NUP9 SNORD123-201ENST00000459473 70 ntBASIC1.51□□□□□ -2.17
LIN7CQ9NUP9 RPL30P7-201ENST00000479312 323 ntBASIC1.51□□□□□ -2.17
LIN7CQ9NUP9 AC107393.1-201ENST00000512403 346 ntBASIC1.51□□□□□ -2.17
LIN7CQ9NUP9 RNU6-947P-201ENST00000516264 106 ntBASIC1.51□□□□□ -2.17
LIN7CQ9NUP9 Y_RNA.674-201ENST00000516362 113 ntBASIC1.51□□□□□ -2.17
LIN7CQ9NUP9 SNORA74.3-201ENST00000517108 154 ntBASIC1.51□□□□□ -2.17
LIN7CQ9NUP9 SNRPGP19-201ENST00000603826 189 ntBASIC1.51□□□□□ -2.17
LIN7CQ9NUP9 SNORD61-201ENST00000384252 73 ntBASIC1.5□□□□□ -2.17
LIN7CQ9NUP9 Y_RNA.547-201ENST00000384654 119 ntBASIC1.5□□□□□ -2.17
LIN7CQ9NUP9 MIR583-201ENST00000384846 75 ntBASIC1.5□□□□□ -2.17
LIN7CQ9NUP9 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
LIN7CQ9NUP9 SNORA26-201ENST00000391286 122 ntBASIC1.5□□□□□ -2.17
LIN7CQ9NUP9 MIR1261-201ENST00000408659 82 ntBASIC1.5□□□□□ -2.17
LIN7CQ9NUP9 RNU6-847P-201ENST00000411115 108 ntBASIC1.5□□□□□ -2.17
LIN7CQ9NUP9 SNRPGP13-201ENST00000442212 177 ntBASIC1.5□□□□□ -2.17
LIN7CQ9NUP9 RNU6-693P-201ENST00000516134 107 ntBASIC1.5□□□□□ -2.17
LIN7CQ9NUP9 RNU6-830P-201ENST00000516353 107 ntBASIC1.5□□□□□ -2.17
LIN7CQ9NUP9 RNA5SP153-201ENST00000516498 76 ntBASIC1.5□□□□□ -2.17
LIN7CQ9NUP9 AC022559.1-201ENST00000520905 205 ntBASIC1.5□□□□□ -2.17
LIN7CQ9NUP9 MIR4419B-201ENST00000577260 68 ntBASIC1.5□□□□□ -2.17
LIN7CQ9NUP9 AL357312.1-201ENST00000603879 298 ntBASIC1.5□□□□□ -2.17
LIN7CQ9NUP9 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.49□□□□□ -2.17
LIN7CQ9NUP9 SNORA79-201ENST00000408376 140 ntBASIC1.49□□□□□ -2.17
LIN7CQ9NUP9 Y_RNA.793-201ENST00000411222 111 ntBASIC1.49□□□□□ -2.17
LIN7CQ9NUP9 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.49□□□□□ -2.17
LIN7CQ9NUP9 AL138752.1-201ENST00000452964 351 ntBASIC1.49□□□□□ -2.17
LIN7CQ9NUP9 RNU6-504P-201ENST00000516568 104 ntBASIC1.49□□□□□ -2.17
LIN7CQ9NUP9 RN7SKP88-201ENST00000516847 250 ntBASIC1.49□□□□□ -2.17
LIN7CQ9NUP9 RNU6-1270P-201ENST00000517128 108 ntBASIC1.49□□□□□ -2.17
LIN7CQ9NUP9 RNU6-165P-201ENST00000517170 99 ntBASIC1.49□□□□□ -2.17
LIN7CQ9NUP9 CYP3A52P-201ENST00000563326 91 ntBASIC1.49□□□□□ -2.17
LIN7CQ9NUP9 7SK.8-201ENST00000612110 250 ntBASIC1.49□□□□□ -2.17
LIN7CQ9NUP9 7SK.11-201ENST00000615477 250 ntBASIC1.49□□□□□ -2.17
LIN7CQ9NUP9 7SK.13-201ENST00000622040 250 ntBASIC1.49□□□□□ -2.17
LIN7CQ9NUP9 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
LIN7CQ9NUP9 RNU6-1318P-201ENST00000365389 103 ntBASIC1.48□□□□□ -2.17
LIN7CQ9NUP9 SNORD24-201ENST00000383884 75 ntBASIC1.48□□□□□ -2.17
LIN7CQ9NUP9 Y_RNA.412-201ENST00000384001 104 ntBASIC1.48□□□□□ -2.17
LIN7CQ9NUP9 U8.17-201ENST00000391292 132 ntBASIC1.48□□□□□ -2.17
LIN7CQ9NUP9 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.48□□□□□ -2.17
LIN7CQ9NUP9 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.48□□□□□ -2.17
LIN7CQ9NUP9 RNU4-57P-201ENST00000515980 135 ntBASIC1.48□□□□□ -2.17
LIN7CQ9NUP9 RNU6-197P-201ENST00000516680 100 ntBASIC1.48□□□□□ -2.17
LIN7CQ9NUP9 RNU7-181P-201ENST00000517234 74 ntBASIC1.48□□□□□ -2.17
LIN7CQ9NUP9 AC007751.1-201ENST00000529260 376 ntBASIC1.48□□□□□ -2.17
LIN7CQ9NUP9 MIR4298-201ENST00000584380 73 ntBASIC1.48□□□□□ -2.17
LIN7CQ9NUP9 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.48□□□□□ -2.17
LIN7CQ9NUP9 U6.106-201ENST00000636360 105 ntBASIC1.48□□□□□ -2.17
LIN7CQ9NUP9 Y_RNA.66-201ENST00000362862 102 ntBASIC1.47□□□□□ -2.17
LIN7CQ9NUP9 Y_RNA.233-201ENST00000364407 101 ntBASIC1.47□□□□□ -2.17
LIN7CQ9NUP9 RNU6-275P-201ENST00000364910 107 ntBASIC1.47□□□□□ -2.17
LIN7CQ9NUP9 Y_RNA.435-201ENST00000384095 112 ntBASIC1.47□□□□□ -2.17
LIN7CQ9NUP9 MIR548A2-201ENST00000384956 97 ntBASIC1.47□□□□□ -2.17
LIN7CQ9NUP9 MIR520C-201ENST00000385005 87 ntBASIC1.47□□□□□ -2.17
LIN7CQ9NUP9 RNU4-43P-201ENST00000410628 137 ntBASIC1.47□□□□□ -2.17
LIN7CQ9NUP9 SNORD111.1-201ENST00000516421 86 ntBASIC1.47□□□□□ -2.17
LIN7CQ9NUP9 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.47□□□□□ -2.17
LIN7CQ9NUP9 AP002392.1-201ENST00000537692 208 ntBASIC1.47□□□□□ -2.17
LIN7CQ9NUP9 AL160236.1-201ENST00000556317 195 ntBASIC1.47□□□□□ -2.17
LIN7CQ9NUP9 MIR3671-201ENST00000580455 88 ntBASIC1.47□□□□□ -2.17
LIN7CQ9NUP9 MIR4764-201ENST00000580680 88 ntBASIC1.47□□□□□ -2.17
LIN7CQ9NUP9 MIR548AR-201ENST00000582191 57 ntBASIC1.47□□□□□ -2.17
LIN7CQ9NUP9 AC097639.2-201ENST00000603159 172 ntBASIC1.47□□□□□ -2.17
LIN7CQ9NUP9 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.47□□□□□ -2.17
LIN7CQ9NUP9 Y_RNA.75-201ENST00000362927 97 ntBASIC1.46□□□□□ -2.18
LIN7CQ9NUP9 RNU6-888P-201ENST00000363010 101 ntBASIC1.46□□□□□ -2.18
LIN7CQ9NUP9 SNORD115-28-201ENST00000363931 81 ntBASIC1.46□□□□□ -2.18
LIN7CQ9NUP9 MIR518F-201ENST00000384973 87 ntBASIC1.46□□□□□ -2.18
LIN7CQ9NUP9 U8.13-201ENST00000390842 128 ntBASIC1.46□□□□□ -2.18
LIN7CQ9NUP9 SNORD28B-201ENST00000390993 75 ntBASIC1.46□□□□□ -2.18
LIN7CQ9NUP9 MTND5P15-201ENST00000434246 349 ntBASIC1.46□□□□□ -2.18
LIN7CQ9NUP9 AL096861.1-201ENST00000610899 123 ntBASIC1.46□□□□□ -2.18
LIN7CQ9NUP9 RPL39P39-201ENST00000455840 151 ntBASIC1.45□□□□□ -2.18
LIN7CQ9NUP9 RNU6-1219P-201ENST00000516143 112 ntBASIC1.45□□□□□ -2.18
LIN7CQ9NUP9 RNU7-43P-201ENST00000516554 64 ntBASIC1.45□□□□□ -2.18
LIN7CQ9NUP9 RNU6-295P-201ENST00000516901 104 ntBASIC1.45□□□□□ -2.18
LIN7CQ9NUP9 SNORA81.3-201ENST00000517283 198 ntBASIC1.45□□□□□ -2.18
LIN7CQ9NUP9 MRPS18CP4-201ENST00000535821 231 ntBASIC1.45□□□□□ -2.18
LIN7CQ9NUP9 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
LIN7CQ9NUP9 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.44□□□□□ -2.18
LIN7CQ9NUP9 Y_RNA.23-201ENST00000362496 106 ntBASIC1.44□□□□□ -2.18
LIN7CQ9NUP9 Y_RNA.29-201ENST00000362570 113 ntBASIC1.44□□□□□ -2.18
LIN7CQ9NUP9 RNU6-970P-201ENST00000516312 107 ntBASIC1.44□□□□□ -2.18
LIN7CQ9NUP9 MIR3192-201ENST00000584920 77 ntBASIC1.44□□□□□ -2.18
LIN7CQ9NUP9 AC072026.1-201ENST00000605023 201 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms