Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 MIR3149-201ENST00000584629 83 ntBASIC1.35□□□□□ -2.19
SLC6A13Q9NSD5 AC006441.5-201ENST00000612680 209 ntBASIC1.35□□□□□ -2.19
SLC6A13Q9NSD5 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.34□□□□□ -2.19
SLC6A13Q9NSD5 Y_RNA.20-201ENST00000362479 113 ntBASIC1.34□□□□□ -2.19
SLC6A13Q9NSD5 Y_RNA.24-201ENST00000362508 103 ntBASIC1.34□□□□□ -2.19
SLC6A13Q9NSD5 Y_RNA.229-201ENST00000364347 113 ntBASIC1.34□□□□□ -2.19
SLC6A13Q9NSD5 Y_RNA.478-201ENST00000384358 107 ntBASIC1.34□□□□□ -2.19
SLC6A13Q9NSD5 RNA5SP247-201ENST00000411181 105 ntBASIC1.34□□□□□ -2.19
SLC6A13Q9NSD5 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.34□□□□□ -2.19
SLC6A13Q9NSD5 RPL39P39-201ENST00000455840 151 ntBASIC1.34□□□□□ -2.19
SLC6A13Q9NSD5 SNORD77.4-201ENST00000516158 81 ntBASIC1.34□□□□□ -2.19
SLC6A13Q9NSD5 SNORA74.3-201ENST00000517108 154 ntBASIC1.34□□□□□ -2.19
SLC6A13Q9NSD5 MIR4662B-201ENST00000579498 81 ntBASIC1.34□□□□□ -2.19
SLC6A13Q9NSD5 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.34□□□□□ -2.19
SLC6A13Q9NSD5 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
SLC6A13Q9NSD5 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.34□□□□□ -2.19
SLC6A13Q9NSD5 AL365265.1-201ENST00000621045 234 ntBASIC1.34□□□□□ -2.19
SLC6A13Q9NSD5 Y_RNA.76-201ENST00000362931 109 ntBASIC1.33□□□□□ -2.2
SLC6A13Q9NSD5 RNU6-60P-201ENST00000364792 103 ntBASIC1.33□□□□□ -2.2
SLC6A13Q9NSD5 SNORD26-201ENST00000384147 75 ntBASIC1.33□□□□□ -2.2
SLC6A13Q9NSD5 Y_RNA.572-201ENST00000384757 98 ntBASIC1.33□□□□□ -2.2
SLC6A13Q9NSD5 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.33□□□□□ -2.2
SLC6A13Q9NSD5 AP1B1P2-201ENST00000416196 106 ntBASIC1.33□□□□□ -2.2
SLC6A13Q9NSD5 RNU6-830P-201ENST00000516353 107 ntBASIC1.33□□□□□ -2.2
SLC6A13Q9NSD5 MIR4781-201ENST00000585250 76 ntBASIC1.33□□□□□ -2.2
SLC6A13Q9NSD5 MIR7974-201ENST00000615835 79 ntBASIC1.33□□□□□ -2.2
SLC6A13Q9NSD5 MIR8065-201ENST00000620577 100 ntBASIC1.33□□□□□ -2.2
SLC6A13Q9NSD5 RNU6-653P-201ENST00000363074 106 ntBASIC1.32□□□□□ -2.2
SLC6A13Q9NSD5 SNORD27-201ENST00000363981 72 ntBASIC1.32□□□□□ -2.2
SLC6A13Q9NSD5 Y_RNA.262-201ENST00000364641 102 ntBASIC1.32□□□□□ -2.2
SLC6A13Q9NSD5 Y_RNA.292-201ENST00000364904 97 ntBASIC1.32□□□□□ -2.2
SLC6A13Q9NSD5 RNU6-574P-201ENST00000384265 107 ntBASIC1.32□□□□□ -2.2
SLC6A13Q9NSD5 MTND1P19-201ENST00000511780 315 ntBASIC1.32□□□□□ -2.2
SLC6A13Q9NSD5 SNORD116-28-201ENST00000516123 91 ntBASIC1.32□□□□□ -2.2
SLC6A13Q9NSD5 RNU6-126P-201ENST00000516685 103 ntBASIC1.32□□□□□ -2.2
SLC6A13Q9NSD5 SNORA18.7-201ENST00000516910 131 ntBASIC1.32□□□□□ -2.2
SLC6A13Q9NSD5 AC004817.2-201ENST00000561794 651 ntBASIC1.32□□□□□ -2.2
SLC6A13Q9NSD5 AC068338.1-201ENST00000565567 176 ntBASIC1.32□□□□□ -2.2
SLC6A13Q9NSD5 SNORD53B-201ENST00000577887 78 ntBASIC1.32□□□□□ -2.2
SLC6A13Q9NSD5 AC011921.3-201ENST00000605540 361 ntBASIC1.32□□□□□ -2.2
SLC6A13Q9NSD5 Pinc.1-201ENST00000616452 154 ntBASIC1.32□□□□□ -2.2
SLC6A13Q9NSD5 AP000648.3-201ENST00000623539 4507 ntBASIC1.31□□□□□ -2.2
SLC6A13Q9NSD5 U8.1-201ENST00000362843 134 ntBASIC1.31□□□□□ -2.2
SLC6A13Q9NSD5 RNU4-17P-201ENST00000365598 141 ntBASIC1.31□□□□□ -2.2
SLC6A13Q9NSD5 Y_RNA.477-201ENST00000384352 108 ntBASIC1.31□□□□□ -2.2
SLC6A13Q9NSD5 snosnR66.1-201ENST00000391095 99 ntBASIC1.31□□□□□ -2.2
SLC6A13Q9NSD5 Y_RNA.587-201ENST00000391210 103 ntBASIC1.31□□□□□ -2.2
SLC6A13Q9NSD5 SNORD58.1-201ENST00000391313 66 ntBASIC1.31□□□□□ -2.2
SLC6A13Q9NSD5 SNORD123-201ENST00000459473 70 ntBASIC1.31□□□□□ -2.2
SLC6A13Q9NSD5 RNU6-1023P-201ENST00000516137 106 ntBASIC1.31□□□□□ -2.2
SLC6A13Q9NSD5 RN7SKP164-201ENST00000516138 266 ntBASIC1.31□□□□□ -2.2
SLC6A13Q9NSD5 RNU6-947P-201ENST00000516264 106 ntBASIC1.31□□□□□ -2.2
SLC6A13Q9NSD5 Y_RNA.673-201ENST00000516306 88 ntBASIC1.31□□□□□ -2.2
SLC6A13Q9NSD5 RNU7-43P-201ENST00000516554 64 ntBASIC1.31□□□□□ -2.2
SLC6A13Q9NSD5 SNORA31.24-201ENST00000517232 57 ntBASIC1.31□□□□□ -2.2
SLC6A13Q9NSD5 DNAJC19P9-201ENST00000555084 351 ntBASIC1.31□□□□□ -2.2
SLC6A13Q9NSD5 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.31□□□□□ -2.2
SLC6A13Q9NSD5 RNY3P5-201ENST00000384127 102 ntBASIC1.3□□□□□ -2.2
SLC6A13Q9NSD5 Y_RNA.539-201ENST00000384635 107 ntBASIC1.3□□□□□ -2.2
SLC6A13Q9NSD5 MIR150-201ENST00000385048 84 ntBASIC1.3□□□□□ -2.2
SLC6A13Q9NSD5 SNORA67.6-201ENST00000391093 99 ntBASIC1.3□□□□□ -2.2
SLC6A13Q9NSD5 RNU6-321P-201ENST00000410912 106 ntBASIC1.3□□□□□ -2.2
SLC6A13Q9NSD5 RNU6-1054P-201ENST00000411293 104 ntBASIC1.3□□□□□ -2.2
SLC6A13Q9NSD5 COX6CP14-201ENST00000469580 174 ntBASIC1.3□□□□□ -2.2
SLC6A13Q9NSD5 MIR3128-201ENST00000581957 66 ntBASIC1.3□□□□□ -2.2
SLC6A13Q9NSD5 AL512598.1-201ENST00000610158 273 ntBASIC1.3□□□□□ -2.2
SLC6A13Q9NSD5 AL391903.3-201ENST00000612158 163 ntBASIC1.3□□□□□ -2.2
SLC6A13Q9NSD5 AC015726.2-201ENST00000620112 122 ntBASIC1.3□□□□□ -2.2
SLC6A13Q9NSD5 MIR26B-201ENST00000362251 77 ntBASIC1.29□□□□□ -2.2
SLC6A13Q9NSD5 snoU2_19.4-201ENST00000364329 80 ntBASIC1.29□□□□□ -2.2
SLC6A13Q9NSD5 Y_RNA.307-201ENST00000365022 117 ntBASIC1.29□□□□□ -2.2
SLC6A13Q9NSD5 MIR616-201ENST00000385293 97 ntBASIC1.29□□□□□ -2.2
SLC6A13Q9NSD5 RNU6-381P-201ENST00000391259 108 ntBASIC1.29□□□□□ -2.2
SLC6A13Q9NSD5 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.29□□□□□ -2.2
SLC6A13Q9NSD5 SNRPGP13-201ENST00000442212 177 ntBASIC1.29□□□□□ -2.2
SLC6A13Q9NSD5 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.29□□□□□ -2.2
SLC6A13Q9NSD5 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.29□□□□□ -2.2
SLC6A13Q9NSD5 RNU7-95P-201ENST00000459222 64 ntBASIC1.29□□□□□ -2.2
SLC6A13Q9NSD5 Y_RNA.680-201ENST00000516441 93 ntBASIC1.29□□□□□ -2.2
SLC6A13Q9NSD5 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.29□□□□□ -2.2
SLC6A13Q9NSD5 AL359821.1-201ENST00000605519 182 ntBASIC1.29□□□□□ -2.2
SLC6A13Q9NSD5 AL096861.1-201ENST00000610899 123 ntBASIC1.29□□□□□ -2.2
SLC6A13Q9NSD5 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.29□□□□□ -2.2
SLC6A13Q9NSD5 MIR337-201ENST00000362281 93 ntBASIC1.28□□□□□ -2.2
SLC6A13Q9NSD5 Y_RNA.60-201ENST00000362831 98 ntBASIC1.28□□□□□ -2.2
SLC6A13Q9NSD5 Y_RNA.269-201ENST00000364685 89 ntBASIC1.28□□□□□ -2.2
SLC6A13Q9NSD5 Y_RNA.447-201ENST00000384184 113 ntBASIC1.28□□□□□ -2.2
SLC6A13Q9NSD5 MIR520C-201ENST00000385005 87 ntBASIC1.28□□□□□ -2.2
SLC6A13Q9NSD5 RNU2-55P-201ENST00000411146 174 ntBASIC1.28□□□□□ -2.2
SLC6A13Q9NSD5 AC005840.1-201ENST00000498412 377 ntBASIC1.28□□□□□ -2.2
SLC6A13Q9NSD5 TRMT112P2-201ENST00000512910 132 ntBASIC1.28□□□□□ -2.2
SLC6A13Q9NSD5 SNORA31.2-201ENST00000516019 134 ntBASIC1.28□□□□□ -2.2
SLC6A13Q9NSD5 MIR4764-201ENST00000580680 88 ntBASIC1.28□□□□□ -2.2
SLC6A13Q9NSD5 Y_RNA.65-201ENST00000362846 100 ntBASIC1.27□□□□□ -2.21
SLC6A13Q9NSD5 SNORA20.1-201ENST00000364790 130 ntBASIC1.27□□□□□ -2.21
SLC6A13Q9NSD5 RNY4P28-201ENST00000365281 93 ntBASIC1.27□□□□□ -2.21
SLC6A13Q9NSD5 Y_RNA.486-201ENST00000384398 107 ntBASIC1.27□□□□□ -2.21
SLC6A13Q9NSD5 MIR758-201ENST00000390227 88 ntBASIC1.27□□□□□ -2.21
SLC6A13Q9NSD5 RNU6-1228P-201ENST00000391014 107 ntBASIC1.27□□□□□ -2.21
SLC6A13Q9NSD5 MIR548O-201ENST00000408583 114 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms