Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 Y_RNA.631-201ENST00000459607 101 ntBASIC0.55□□□□□ -2.32
CCL28Q9NRJ3 RNU6-988P-201ENST00000519081 107 ntBASIC0.55□□□□□ -2.32
CCL28Q9NRJ3 AL021707.8-201ENST00000609428 183 ntBASIC0.55□□□□□ -2.32
CCL28Q9NRJ3 AC013791.1-201ENST00000616619 62 ntBASIC0.55□□□□□ -2.32
CCL28Q9NRJ3 7SK.10-201ENST00000621414 298 ntBASIC0.55□□□□□ -2.32
CCL28Q9NRJ3 MIR6835-201ENST00000621552 64 ntBASIC0.55□□□□□ -2.32
CCL28Q9NRJ3 AC022140.2-201ENST00000623500 188 ntBASIC0.55□□□□□ -2.32
CCL28Q9NRJ3 RNU6-1272P-201ENST00000362776 107 ntBASIC0.54□□□□□ -2.32
CCL28Q9NRJ3 Y_RNA.105-201ENST00000363182 111 ntBASIC0.54□□□□□ -2.32
CCL28Q9NRJ3 Y_RNA.168-201ENST00000363740 102 ntBASIC0.54□□□□□ -2.32
CCL28Q9NRJ3 Y_RNA.338-201ENST00000365320 114 ntBASIC0.54□□□□□ -2.32
CCL28Q9NRJ3 RNU6-396P-201ENST00000365369 105 ntBASIC0.54□□□□□ -2.32
CCL28Q9NRJ3 Y_RNA.460-201ENST00000384255 102 ntBASIC0.54□□□□□ -2.32
CCL28Q9NRJ3 RNA5SP95-201ENST00000410319 137 ntBASIC0.54□□□□□ -2.32
CCL28Q9NRJ3 RNU6-121P-201ENST00000410525 99 ntBASIC0.54□□□□□ -2.32
CCL28Q9NRJ3 RNU6-847P-201ENST00000411115 108 ntBASIC0.54□□□□□ -2.32
CCL28Q9NRJ3 RNU2-13P-201ENST00000515909 113 ntBASIC0.54□□□□□ -2.32
CCL28Q9NRJ3 SNORA40.15-201ENST00000516884 107 ntBASIC0.54□□□□□ -2.32
CCL28Q9NRJ3 MIR548AO-201ENST00000579992 96 ntBASIC0.54□□□□□ -2.32
CCL28Q9NRJ3 MIR4791-201ENST00000607666 84 ntBASIC0.54□□□□□ -2.32
CCL28Q9NRJ3 AC108706.1-201ENST00000611053 297 ntBASIC0.54□□□□□ -2.32
CCL28Q9NRJ3 MTND1P7-201ENST00000632801 297 ntBASIC0.54□□□□□ -2.32
CCL28Q9NRJ3 MIR6767-201ENST00000637302 66 ntBASIC0.54□□□□□ -2.32
CCL28Q9NRJ3 MIR377-201ENST00000362145 69 ntBASIC0.53□□□□□ -2.32
CCL28Q9NRJ3 RNU6-514P-201ENST00000384208 107 ntBASIC0.53□□□□□ -2.32
CCL28Q9NRJ3 RNU6-474P-201ENST00000384243 107 ntBASIC0.53□□□□□ -2.32
CCL28Q9NRJ3 RNU6-110P-201ENST00000384508 104 ntBASIC0.53□□□□□ -2.32
CCL28Q9NRJ3 RNA5SP496-201ENST00000391240 109 ntBASIC0.53□□□□□ -2.32
CCL28Q9NRJ3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.53□□□□□ -2.32
CCL28Q9NRJ3 MIR1827-201ENST00000408549 66 ntBASIC0.53□□□□□ -2.32
CCL28Q9NRJ3 MIR548O-201ENST00000408583 114 ntBASIC0.53□□□□□ -2.32
CCL28Q9NRJ3 SNORD99-201ENST00000408612 74 ntBASIC0.53□□□□□ -2.32
CCL28Q9NRJ3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.53□□□□□ -2.32
CCL28Q9NRJ3 Y_RNA.637-201ENST00000459424 114 ntBASIC0.53□□□□□ -2.32
CCL28Q9NRJ3 RNU6-237P-201ENST00000515985 71 ntBASIC0.53□□□□□ -2.32
CCL28Q9NRJ3 RNU7-25P-201ENST00000516544 62 ntBASIC0.53□□□□□ -2.32
CCL28Q9NRJ3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.53□□□□□ -2.32
CCL28Q9NRJ3 DEFB108E-201ENST00000524692 240 ntBASIC0.53□□□□□ -2.32
CCL28Q9NRJ3 MIR4498-201ENST00000577599 66 ntBASIC0.53□□□□□ -2.32
CCL28Q9NRJ3 AC012433.1-201ENST00000588916 398 ntBASIC0.53□□□□□ -2.32
CCL28Q9NRJ3 AL512605.2-201ENST00000592972 256 ntBASIC0.53□□□□□ -2.32
CCL28Q9NRJ3 uc_338.4-201ENST00000616635 176 ntBASIC0.53□□□□□ -2.32
CCL28Q9NRJ3 AC023934.1-201ENST00000574529 2389 ntBASIC0.52□□□□□ -2.33
CCL28Q9NRJ3 HSBP1P2-201ENST00000299671 229 ntBASIC0.52□□□□□ -2.33
CCL28Q9NRJ3 MIR367-201ENST00000362299 68 ntBASIC0.52□□□□□ -2.33
CCL28Q9NRJ3 SNORA25.1-201ENST00000362326 128 ntBASIC0.52□□□□□ -2.33
CCL28Q9NRJ3 Y_RNA.14-201ENST00000362415 103 ntBASIC0.52□□□□□ -2.33
CCL28Q9NRJ3 Y_RNA.128-201ENST00000363391 112 ntBASIC0.52□□□□□ -2.33
CCL28Q9NRJ3 Y_RNA.276-201ENST00000364732 109 ntBASIC0.52□□□□□ -2.33
CCL28Q9NRJ3 MT-TN-201ENST00000387400 73 ntBASIC0.52□□□□□ -2.33
CCL28Q9NRJ3 SNORA53-201ENST00000391141 249 ntBASIC0.52□□□□□ -2.33
CCL28Q9NRJ3 RNU6-383P-201ENST00000410864 94 ntBASIC0.52□□□□□ -2.33
CCL28Q9NRJ3 AL606490.4-201ENST00000423117 127 ntBASIC0.52□□□□□ -2.33
CCL28Q9NRJ3 AC098869.1-201ENST00000481627 292 ntBASIC0.52□□□□□ -2.33
CCL28Q9NRJ3 COX6CP6-201ENST00000490840 228 ntBASIC0.52□□□□□ -2.33
CCL28Q9NRJ3 RNU7-149P-201ENST00000516739 59 ntBASIC0.52□□□□□ -2.33
CCL28Q9NRJ3 RNU2-31P-201ENST00000516954 155 ntBASIC0.52□□□□□ -2.33
CCL28Q9NRJ3 AL590095.2-201ENST00000604136 117 ntBASIC0.52□□□□□ -2.33
CCL28Q9NRJ3 AC037487.3-201ENST00000606668 112 ntBASIC0.52□□□□□ -2.33
CCL28Q9NRJ3 AC243994.1-201ENST00000618627 109 ntBASIC0.52□□□□□ -2.33
CCL28Q9NRJ3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.52□□□□□ -2.33
CCL28Q9NRJ3 MTND4P29-201ENST00000503122 1372 ntBASIC0.52□□□□□ -2.33
CCL28Q9NRJ3 RNU6-1138P-201ENST00000365359 106 ntBASIC0.51□□□□□ -2.33
CCL28Q9NRJ3 RNU6-326P-201ENST00000365480 107 ntBASIC0.51□□□□□ -2.33
CCL28Q9NRJ3 Y_RNA.376-201ENST00000365638 108 ntBASIC0.51□□□□□ -2.33
CCL28Q9NRJ3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
CCL28Q9NRJ3 Y_RNA.547-201ENST00000384654 119 ntBASIC0.51□□□□□ -2.33
CCL28Q9NRJ3 AC091959.1-201ENST00000495857 238 ntBASIC0.51□□□□□ -2.33
CCL28Q9NRJ3 RNU6-1053P-201ENST00000515930 101 ntBASIC0.51□□□□□ -2.33
CCL28Q9NRJ3 AC004817.2-201ENST00000561794 651 ntBASIC0.51□□□□□ -2.33
CCL28Q9NRJ3 MIR5692C2-201ENST00000577959 77 ntBASIC0.51□□□□□ -2.33
CCL28Q9NRJ3 MIR4724-201ENST00000579485 89 ntBASIC0.51□□□□□ -2.33
CCL28Q9NRJ3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.51□□□□□ -2.33
CCL28Q9NRJ3 AC134503.1-201ENST00000633048 54 ntBASIC0.51□□□□□ -2.33
CCL28Q9NRJ3 snoU2_19.2-201ENST00000363024 80 ntBASIC0.5□□□□□ -2.33
CCL28Q9NRJ3 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
CCL28Q9NRJ3 Y_RNA.394-201ENST00000383942 103 ntBASIC0.5□□□□□ -2.33
CCL28Q9NRJ3 Y_RNA.455-201ENST00000384230 98 ntBASIC0.5□□□□□ -2.33
CCL28Q9NRJ3 Y_RNA.541-201ENST00000384640 113 ntBASIC0.5□□□□□ -2.33
CCL28Q9NRJ3 MIR508-201ENST00000384857 115 ntBASIC0.5□□□□□ -2.33
CCL28Q9NRJ3 ELOCP20-201ENST00000422460 345 ntBASIC0.5□□□□□ -2.33
CCL28Q9NRJ3 BTF3P11-201ENST00000426582 477 ntBASIC0.5□□□□□ -2.33
CCL28Q9NRJ3 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.5□□□□□ -2.33
CCL28Q9NRJ3 Y_RNA.711-201ENST00000516993 102 ntBASIC0.5□□□□□ -2.33
CCL28Q9NRJ3 AC131281.1-201ENST00000522984 164 ntBASIC0.5□□□□□ -2.33
CCL28Q9NRJ3 AP003484.1-201ENST00000530974 250 ntBASIC0.5□□□□□ -2.33
CCL28Q9NRJ3 AL049861.1-201ENST00000603130 150 ntBASIC0.5□□□□□ -2.33
CCL28Q9NRJ3 AL355297.3-201ENST00000604082 446 ntBASIC0.5□□□□□ -2.33
CCL28Q9NRJ3 AP000753.3-201ENST00000604083 169 ntBASIC0.5□□□□□ -2.33
CCL28Q9NRJ3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.5□□□□□ -2.33
CCL28Q9NRJ3 AC068700.1-201ENST00000565862 3754 ntBASIC0.49□□□□□ -2.33
CCL28Q9NRJ3 MIR1-1-201ENST00000362147 71 ntBASIC0.49□□□□□ -2.33
CCL28Q9NRJ3 MIR337-201ENST00000362281 93 ntBASIC0.49□□□□□ -2.33
CCL28Q9NRJ3 MIR96-201ENST00000362288 78 ntBASIC0.49□□□□□ -2.33
CCL28Q9NRJ3 SNORD115-34-201ENST00000362441 82 ntBASIC0.49□□□□□ -2.33
CCL28Q9NRJ3 Y_RNA.19-201ENST00000362462 99 ntBASIC0.49□□□□□ -2.33
CCL28Q9NRJ3 SNORD115-12-201ENST00000362583 82 ntBASIC0.49□□□□□ -2.33
CCL28Q9NRJ3 SNORD115-29-201ENST00000362834 82 ntBASIC0.49□□□□□ -2.33
CCL28Q9NRJ3 SNORD115-9-201ENST00000362912 82 ntBASIC0.49□□□□□ -2.33
CCL28Q9NRJ3 SNORD115-21-201ENST00000362963 81 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 178.9 ms