Protein–RNA interactions for Protein: Q9NR81

ARHGEF3, Rho guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3Q9NR81 AP001485.1-201ENST00000604799 199 ntBASIC2.03□□□□□ -2.08
ARHGEF3Q9NR81 MIR6844-201ENST00000637122 62 ntBASIC2.03□□□□□ -2.08
ARHGEF3Q9NR81 AL359851.1-201ENST00000569460 4997 ntBASIC2.03□□□□□ -2.08
ARHGEF3Q9NR81 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
ARHGEF3Q9NR81 RNU6-1082P-201ENST00000364574 107 ntBASIC2.02□□□□□ -2.09
ARHGEF3Q9NR81 RNA5SP190-201ENST00000365222 118 ntBASIC2.02□□□□□ -2.09
ARHGEF3Q9NR81 SNORA48.1-201ENST00000390879 135 ntBASIC2.02□□□□□ -2.09
ARHGEF3Q9NR81 RNU6-588P-201ENST00000410281 105 ntBASIC2.02□□□□□ -2.09
ARHGEF3Q9NR81 RNU2-70P-201ENST00000410718 179 ntBASIC2.02□□□□□ -2.09
ARHGEF3Q9NR81 RNU6-321P-201ENST00000410912 106 ntBASIC2.02□□□□□ -2.09
ARHGEF3Q9NR81 AC244636.1-201ENST00000421152 228 ntBASIC2.02□□□□□ -2.09
ARHGEF3Q9NR81 RNU7-197P-201ENST00000458836 62 ntBASIC2.02□□□□□ -2.09
ARHGEF3Q9NR81 AC112693.2-201ENST00000556538 232 ntBASIC2.02□□□□□ -2.09
ARHGEF3Q9NR81 AC097639.2-201ENST00000603159 172 ntBASIC2.02□□□□□ -2.09
ARHGEF3Q9NR81 AL627230.6-201ENST00000611129 280 ntBASIC2.02□□□□□ -2.09
ARHGEF3Q9NR81 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.02□□□□□ -2.09
ARHGEF3Q9NR81 MIR8054-201ENST00000620877 86 ntBASIC2.02□□□□□ -2.09
ARHGEF3Q9NR81 RNU6-199P-201ENST00000362954 107 ntBASIC2.01□□□□□ -2.09
ARHGEF3Q9NR81 SNORD68-201ENST00000363214 84 ntBASIC2.01□□□□□ -2.09
ARHGEF3Q9NR81 RNU6-457P-201ENST00000363999 107 ntBASIC2.01□□□□□ -2.09
ARHGEF3Q9NR81 RNU6-597P-201ENST00000365620 102 ntBASIC2.01□□□□□ -2.09
ARHGEF3Q9NR81 RNU6-1336P-201ENST00000383886 109 ntBASIC2.01□□□□□ -2.09
ARHGEF3Q9NR81 MIR676-201ENST00000390702 67 ntBASIC2.01□□□□□ -2.09
ARHGEF3Q9NR81 RNU6-440P-201ENST00000390882 105 ntBASIC2.01□□□□□ -2.09
ARHGEF3Q9NR81 SNORD37.2-201ENST00000391075 66 ntBASIC2.01□□□□□ -2.09
ARHGEF3Q9NR81 HMGN2P19-201ENST00000425149 265 ntBASIC2.01□□□□□ -2.09
ARHGEF3Q9NR81 FTH1P12-201ENST00000432137 551 ntBASIC2.01□□□□□ -2.09
ARHGEF3Q9NR81 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.01□□□□□ -2.09
ARHGEF3Q9NR81 RNA5SP233-201ENST00000459153 113 ntBASIC2.01□□□□□ -2.09
ARHGEF3Q9NR81 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.01□□□□□ -2.09
ARHGEF3Q9NR81 SNORA31.10-201ENST00000516482 106 ntBASIC2.01□□□□□ -2.09
ARHGEF3Q9NR81 MIR3646-201ENST00000578301 84 ntBASIC2.01□□□□□ -2.09
ARHGEF3Q9NR81 AC008507.4-201ENST00000585464 127 ntBASIC2.01□□□□□ -2.09
ARHGEF3Q9NR81 U1.36-201ENST00000620684 176 ntBASIC2.01□□□□□ -2.09
ARHGEF3Q9NR81 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2□□□□□ -2.09
ARHGEF3Q9NR81 Y_RNA.118-201ENST00000363300 101 ntBASIC2□□□□□ -2.09
ARHGEF3Q9NR81 SNORA63D-201ENST00000364359 132 ntBASIC2□□□□□ -2.09
ARHGEF3Q9NR81 SNORA20-201ENST00000384662 132 ntBASIC2□□□□□ -2.09
ARHGEF3Q9NR81 MIR513C-201ENST00000401352 84 ntBASIC2□□□□□ -2.09
ARHGEF3Q9NR81 AL606753.1-201ENST00000427435 87 ntBASIC2□□□□□ -2.09
ARHGEF3Q9NR81 RPL23AP6-201ENST00000446637 472 ntBASIC2□□□□□ -2.09
ARHGEF3Q9NR81 SNORD13-201ENST00000459299 104 ntBASIC2□□□□□ -2.09
ARHGEF3Q9NR81 RNA5SP57-201ENST00000459463 123 ntBASIC2□□□□□ -2.09
ARHGEF3Q9NR81 AC092991.1-201ENST00000477176 376 ntBASIC2□□□□□ -2.09
ARHGEF3Q9NR81 SNORA25.15-201ENST00000516487 89 ntBASIC2□□□□□ -2.09
ARHGEF3Q9NR81 SUB1P4-201ENST00000566062 339 ntBASIC2□□□□□ -2.09
ARHGEF3Q9NR81 MIR4662B-201ENST00000579498 81 ntBASIC2□□□□□ -2.09
ARHGEF3Q9NR81 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2□□□□□ -2.09
ARHGEF3Q9NR81 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
ARHGEF3Q9NR81 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
ARHGEF3Q9NR81 Y_RNA.66-201ENST00000362862 102 ntBASIC1.99□□□□□ -2.09
ARHGEF3Q9NR81 Y_RNA.265-201ENST00000364677 108 ntBASIC1.99□□□□□ -2.09
ARHGEF3Q9NR81 SNORD50B-201ENST00000364995 70 ntBASIC1.99□□□□□ -2.09
ARHGEF3Q9NR81 SNORA4.2-201ENST00000365313 147 ntBASIC1.99□□□□□ -2.09
ARHGEF3Q9NR81 SNORD113-1-201ENST00000365321 69 ntBASIC1.99□□□□□ -2.09
ARHGEF3Q9NR81 RNU6-81P-201ENST00000365608 104 ntBASIC1.99□□□□□ -2.09
ARHGEF3Q9NR81 Y_RNA.586-201ENST00000391146 98 ntBASIC1.99□□□□□ -2.09
ARHGEF3Q9NR81 RNU6-257P-201ENST00000410238 98 ntBASIC1.99□□□□□ -2.09
ARHGEF3Q9NR81 BTF3P4-201ENST00000418852 495 ntBASIC1.99□□□□□ -2.09
ARHGEF3Q9NR81 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.99□□□□□ -2.09
ARHGEF3Q9NR81 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.99□□□□□ -2.09
ARHGEF3Q9NR81 HSPE1P9-201ENST00000440046 311 ntBASIC1.99□□□□□ -2.09
ARHGEF3Q9NR81 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.99□□□□□ -2.09
ARHGEF3Q9NR81 MIR3683-201ENST00000580847 82 ntBASIC1.99□□□□□ -2.09
ARHGEF3Q9NR81 MIR4762-201ENST00000585261 75 ntBASIC1.99□□□□□ -2.09
ARHGEF3Q9NR81 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.99□□□□□ -2.09
ARHGEF3Q9NR81 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
ARHGEF3Q9NR81 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
ARHGEF3Q9NR81 AC010332.2-201ENST00000613083 1904 ntBASIC1.98□□□□□ -2.09
ARHGEF3Q9NR81 RNY1P10-201ENST00000363268 113 ntBASIC1.98□□□□□ -2.09
ARHGEF3Q9NR81 U8.5-201ENST00000364528 136 ntBASIC1.98□□□□□ -2.09
ARHGEF3Q9NR81 Y_RNA.508-201ENST00000384502 114 ntBASIC1.98□□□□□ -2.09
ARHGEF3Q9NR81 RNA5SP482-201ENST00000391269 118 ntBASIC1.98□□□□□ -2.09
ARHGEF3Q9NR81 SNORA75.5-201ENST00000391291 81 ntBASIC1.98□□□□□ -2.09
ARHGEF3Q9NR81 RPL30P13-201ENST00000418873 348 ntBASIC1.98□□□□□ -2.09
ARHGEF3Q9NR81 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.98□□□□□ -2.09
ARHGEF3Q9NR81 RNU6-365P-201ENST00000517113 106 ntBASIC1.98□□□□□ -2.09
ARHGEF3Q9NR81 AC022254.1-201ENST00000567857 235 ntBASIC1.98□□□□□ -2.09
ARHGEF3Q9NR81 AC087685.1-201ENST00000587507 141 ntBASIC1.98□□□□□ -2.09
ARHGEF3Q9NR81 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.98□□□□□ -2.09
ARHGEF3Q9NR81 AL096840.1-201ENST00000603287 93 ntBASIC1.98□□□□□ -2.09
ARHGEF3Q9NR81 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.98□□□□□ -2.09
ARHGEF3Q9NR81 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
ARHGEF3Q9NR81 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
ARHGEF3Q9NR81 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
ARHGEF3Q9NR81 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
ARHGEF3Q9NR81 RNU6-661P-201ENST00000362409 107 ntBASIC1.97□□□□□ -2.09
ARHGEF3Q9NR81 Y_RNA.251-201ENST00000364551 99 ntBASIC1.97□□□□□ -2.09
ARHGEF3Q9NR81 RNA5SP212-201ENST00000391223 107 ntBASIC1.97□□□□□ -2.09
ARHGEF3Q9NR81 SNORA26-201ENST00000391286 122 ntBASIC1.97□□□□□ -2.09
ARHGEF3Q9NR81 RNA5SP100-201ENST00000410903 110 ntBASIC1.97□□□□□ -2.09
ARHGEF3Q9NR81 RNA5SP59-201ENST00000410922 110 ntBASIC1.97□□□□□ -2.09
ARHGEF3Q9NR81 AC003989.2-201ENST00000440224 169 ntBASIC1.97□□□□□ -2.09
ARHGEF3Q9NR81 AC069257.2-201ENST00000441819 155 ntBASIC1.97□□□□□ -2.09
ARHGEF3Q9NR81 STAG3L5P-204ENST00000443759 179 ntBASIC1.97□□□□□ -2.09
ARHGEF3Q9NR81 Y_RNA.666-201ENST00000516187 112 ntBASIC1.97□□□□□ -2.09
ARHGEF3Q9NR81 RNU7-28P-201ENST00000516759 62 ntBASIC1.97□□□□□ -2.09
ARHGEF3Q9NR81 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.97□□□□□ -2.09
ARHGEF3Q9NR81 Y_RNA.714-201ENST00000517065 90 ntBASIC1.97□□□□□ -2.09
ARHGEF3Q9NR81 RNA5SP437-201ENST00000517249 129 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 253.6 ms