Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 RPL23AP42-201ENST00000471152 471 ntBASIC2.49□□□□□ -2.01
BCAS3Q9H6U6 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.49□□□□□ -2.01
BCAS3Q9H6U6 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
BCAS3Q9H6U6 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.49□□□□□ -2.01
BCAS3Q9H6U6 MIR6873-201ENST00000622788 63 ntBASIC2.49□□□□□ -2.01
BCAS3Q9H6U6 AC022513.1-201ENST00000624512 117 ntBASIC2.49□□□□□ -2.01
BCAS3Q9H6U6 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
BCAS3Q9H6U6 AC080100.1-201ENST00000624239 5356 ntBASIC2.49□□□□□ -2.01
BCAS3Q9H6U6 VTRNA1-1-201ENST00000363120 99 ntBASIC2.48□□□□□ -2.01
BCAS3Q9H6U6 RNU6-268P-201ENST00000364174 107 ntBASIC2.48□□□□□ -2.01
BCAS3Q9H6U6 MIR548O-201ENST00000408583 114 ntBASIC2.48□□□□□ -2.01
BCAS3Q9H6U6 RNU6-412P-201ENST00000516434 106 ntBASIC2.48□□□□□ -2.01
BCAS3Q9H6U6 RNA5SP170-201ENST00000517150 101 ntBASIC2.48□□□□□ -2.01
BCAS3Q9H6U6 FO624990.1-201ENST00000636373 85 ntBASIC2.48□□□□□ -2.01
BCAS3Q9H6U6 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
BCAS3Q9H6U6 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
BCAS3Q9H6U6 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
BCAS3Q9H6U6 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
BCAS3Q9H6U6 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
BCAS3Q9H6U6 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.47□□□□□ -2.01
BCAS3Q9H6U6 SNORD14E-201ENST00000364009 85 ntBASIC2.47□□□□□ -2.01
BCAS3Q9H6U6 snoU2-30.1-201ENST00000365012 70 ntBASIC2.47□□□□□ -2.01
BCAS3Q9H6U6 Y_RNA.528-201ENST00000384575 108 ntBASIC2.47□□□□□ -2.01
BCAS3Q9H6U6 MIR29C-201ENST00000385231 88 ntBASIC2.47□□□□□ -2.01
BCAS3Q9H6U6 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.47□□□□□ -2.01
BCAS3Q9H6U6 AC005786.1-201ENST00000588553 154 ntBASIC2.47□□□□□ -2.01
BCAS3Q9H6U6 AL137067.1-201ENST00000615933 120 ntBASIC2.47□□□□□ -2.01
BCAS3Q9H6U6 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
BCAS3Q9H6U6 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
BCAS3Q9H6U6 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
BCAS3Q9H6U6 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
BCAS3Q9H6U6 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
BCAS3Q9H6U6 RNU6-1189P-201ENST00000383958 107 ntBASIC2.46□□□□□ -2.02
BCAS3Q9H6U6 MIR548A1-201ENST00000385041 97 ntBASIC2.46□□□□□ -2.02
BCAS3Q9H6U6 HMGN2P32-201ENST00000444648 269 ntBASIC2.46□□□□□ -2.02
BCAS3Q9H6U6 Y_RNA.694-201ENST00000516677 117 ntBASIC2.46□□□□□ -2.02
BCAS3Q9H6U6 RNU6-826P-201ENST00000516827 104 ntBASIC2.46□□□□□ -2.02
BCAS3Q9H6U6 AC026271.5-201ENST00000577873 130 ntBASIC2.46□□□□□ -2.02
BCAS3Q9H6U6 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.46□□□□□ -2.02
BCAS3Q9H6U6 ZNF720P1-201ENST00000562403 1939 ntBASIC2.46□□□□□ -2.02
BCAS3Q9H6U6 Y_RNA.37-201ENST00000362606 108 ntBASIC2.45□□□□□ -2.02
BCAS3Q9H6U6 SNORD115-28-201ENST00000363931 81 ntBASIC2.45□□□□□ -2.02
BCAS3Q9H6U6 Y_RNA.547-201ENST00000384654 119 ntBASIC2.45□□□□□ -2.02
BCAS3Q9H6U6 MIR1263-201ENST00000408324 86 ntBASIC2.45□□□□□ -2.02
BCAS3Q9H6U6 SNORA11.4-201ENST00000408823 129 ntBASIC2.45□□□□□ -2.02
BCAS3Q9H6U6 UBBP3-201ENST00000445497 241 ntBASIC2.45□□□□□ -2.02
BCAS3Q9H6U6 AC087499.4-201ENST00000448505 178 ntBASIC2.45□□□□□ -2.02
BCAS3Q9H6U6 RNU6-168P-201ENST00000516189 101 ntBASIC2.45□□□□□ -2.02
BCAS3Q9H6U6 RNU7-25P-201ENST00000516544 62 ntBASIC2.45□□□□□ -2.02
BCAS3Q9H6U6 SNORD45.4-201ENST00000516629 73 ntBASIC2.45□□□□□ -2.02
BCAS3Q9H6U6 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.45□□□□□ -2.02
BCAS3Q9H6U6 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
BCAS3Q9H6U6 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
BCAS3Q9H6U6 RNU6-349P-201ENST00000362402 107 ntBASIC2.44□□□□□ -2.02
BCAS3Q9H6U6 SNORD68-201ENST00000363214 84 ntBASIC2.44□□□□□ -2.02
BCAS3Q9H6U6 RNU6-23P-201ENST00000363283 107 ntBASIC2.44□□□□□ -2.02
BCAS3Q9H6U6 Y_RNA.366-201ENST00000365540 102 ntBASIC2.44□□□□□ -2.02
BCAS3Q9H6U6 RNA5SP89-201ENST00000410300 108 ntBASIC2.44□□□□□ -2.02
BCAS3Q9H6U6 RNU6-938P-201ENST00000411285 103 ntBASIC2.44□□□□□ -2.02
BCAS3Q9H6U6 AC245047.3-201ENST00000429428 127 ntBASIC2.44□□□□□ -2.02
BCAS3Q9H6U6 AL606517.2-201ENST00000442855 241 ntBASIC2.44□□□□□ -2.02
BCAS3Q9H6U6 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.44□□□□□ -2.02
BCAS3Q9H6U6 AC007012.1-201ENST00000567192 175 ntBASIC2.44□□□□□ -2.02
BCAS3Q9H6U6 MIR5002-201ENST00000584713 97 ntBASIC2.44□□□□□ -2.02
BCAS3Q9H6U6 AC009831.4-201ENST00000620744 325 ntBASIC2.44□□□□□ -2.02
BCAS3Q9H6U6 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
BCAS3Q9H6U6 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
BCAS3Q9H6U6 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.44□□□□□ -2.02
BCAS3Q9H6U6 AC008555.8-201ENST00000623602 2168 ntBASIC2.44□□□□□ -2.02
BCAS3Q9H6U6 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
BCAS3Q9H6U6 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
BCAS3Q9H6U6 AC092881.1-201ENST00000638218 2733 ntBASIC2.43□□□□□ -2.02
BCAS3Q9H6U6 RNU1-58P-201ENST00000362413 163 ntBASIC2.43□□□□□ -2.02
BCAS3Q9H6U6 Y_RNA.85-201ENST00000363014 111 ntBASIC2.43□□□□□ -2.02
BCAS3Q9H6U6 Y_RNA.198-201ENST00000364013 98 ntBASIC2.43□□□□□ -2.02
BCAS3Q9H6U6 Y_RNA.338-201ENST00000365320 114 ntBASIC2.43□□□□□ -2.02
BCAS3Q9H6U6 Y_RNA.440-201ENST00000384120 114 ntBASIC2.43□□□□□ -2.02
BCAS3Q9H6U6 RNU6-106P-201ENST00000384405 107 ntBASIC2.43□□□□□ -2.02
BCAS3Q9H6U6 SNORA80E-201ENST00000384744 137 ntBASIC2.43□□□□□ -2.02
BCAS3Q9H6U6 MIR802-201ENST00000390235 94 ntBASIC2.43□□□□□ -2.02
BCAS3Q9H6U6 RNU6-830P-201ENST00000516353 107 ntBASIC2.43□□□□□ -2.02
BCAS3Q9H6U6 MIR4446-201ENST00000578505 67 ntBASIC2.43□□□□□ -2.02
BCAS3Q9H6U6 RNU6-94P-201ENST00000607728 107 ntBASIC2.43□□□□□ -2.02
BCAS3Q9H6U6 AC027279.3-201ENST00000625055 122 ntBASIC2.43□□□□□ -2.02
BCAS3Q9H6U6 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.43□□□□□ -2.02
BCAS3Q9H6U6 MIRLET7C-201ENST00000362160 84 ntBASIC2.42□□□□□ -2.02
BCAS3Q9H6U6 Y_RNA.116-201ENST00000363292 103 ntBASIC2.42□□□□□ -2.02
BCAS3Q9H6U6 RNU6-1255P-201ENST00000363434 112 ntBASIC2.42□□□□□ -2.02
BCAS3Q9H6U6 RNU6-1019P-201ENST00000364424 107 ntBASIC2.42□□□□□ -2.02
BCAS3Q9H6U6 SNORA2.2-201ENST00000365473 135 ntBASIC2.42□□□□□ -2.02
BCAS3Q9H6U6 AL445646.1-201ENST00000431784 216 ntBASIC2.42□□□□□ -2.02
BCAS3Q9H6U6 AL031737.1-201ENST00000450125 223 ntBASIC2.42□□□□□ -2.02
BCAS3Q9H6U6 SCARNA16.3-201ENST00000516595 184 ntBASIC2.42□□□□□ -2.02
BCAS3Q9H6U6 RNA5SP137-201ENST00000516833 135 ntBASIC2.42□□□□□ -2.02
BCAS3Q9H6U6 RNA5SP402-201ENST00000517148 110 ntBASIC2.42□□□□□ -2.02
BCAS3Q9H6U6 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.42□□□□□ -2.02
BCAS3Q9H6U6 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
BCAS3Q9H6U6 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
BCAS3Q9H6U6 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
BCAS3Q9H6U6 RNU6-1084P-201ENST00000362498 107 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms