| BEGAIN | Q9BUH8 | RPL39P25-201 | ENST00000449384 | 154 nt | BASIC | 3.49 | □□□□□ -1.85 | | |
| BEGAIN | Q9BUH8 | RNU6-109P-201 | ENST00000516364 | 107 nt | BASIC | 3.49 | □□□□□ -1.85 | | |
| BEGAIN | Q9BUH8 | RNU6-184P-201 | ENST00000516514 | 107 nt | BASIC | 3.49 | □□□□□ -1.85 | | |
| BEGAIN | Q9BUH8 | AC022149.2-201 | ENST00000621061 | 203 nt | BASIC | 3.49 | □□□□□ -1.85 | | |
| BEGAIN | Q9BUH8 | SIRT1-203 | ENST00000406900 | 3295 nt | TSL 2 BASIC | 3.49 | □□□□□ -1.85 | | |
| BEGAIN | Q9BUH8 | MUM1L1-203 | ENST00000372552 | 3957 nt | APPRIS P1 TSL 5 BASIC | 3.49 | □□□□□ -1.85 | | |
| BEGAIN | Q9BUH8 | BCLAF1P1-201 | ENST00000505813 | 2752 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| BEGAIN | Q9BUH8 | ANKRD18EP-201 | ENST00000405487 | 2632 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| BEGAIN | Q9BUH8 | AL022718.1-201 | ENST00000412004 | 84 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| BEGAIN | Q9BUH8 | CST9LP2-201 | ENST00000437612 | 320 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| BEGAIN | Q9BUH8 | AC107297.1-201 | ENST00000459991 | 176 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| BEGAIN | Q9BUH8 | LINC02514-201 | ENST00000509058 | 498 nt | TSL 3 BASIC | 3.48 | □□□□□ -1.85 | | |
| BEGAIN | Q9BUH8 | RNU6-904P-201 | ENST00000516206 | 101 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| BEGAIN | Q9BUH8 | IGHVII-40-1-201 | ENST00000517316 | 58 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| BEGAIN | Q9BUH8 | AC090821.2-201 | ENST00000523552 | 176 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| BEGAIN | Q9BUH8 | MAPK10-266 | ENST00000641066 | 6555 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| BEGAIN | Q9BUH8 | PGGT1B-203 | ENST00000419445 | 9545 nt | APPRIS P1 TSL 1 (best) BASIC | 3.48 | □□□□□ -1.85 | | |
| BEGAIN | Q9BUH8 | PRKACB-204 | ENST00000370685 | 4481 nt | APPRIS P4 TSL 1 (best) BASIC | 3.47 | □□□□□ -1.85 | | |
| BEGAIN | Q9BUH8 | FRS2-201 | ENST00000397997 | 6550 nt | APPRIS P1 TSL 5 BASIC | 3.47 | □□□□□ -1.85 | | |
| BEGAIN | Q9BUH8 | RNU6-49P-201 | ENST00000384256 | 107 nt | BASIC | 3.47 | □□□□□ -1.85 | | |
| BEGAIN | Q9BUH8 | RNA5SP229-201 | ENST00000410809 | 99 nt | BASIC | 3.47 | □□□□□ -1.85 | | |
| BEGAIN | Q9BUH8 | RNA5SP144-201 | ENST00000410846 | 116 nt | BASIC | 3.47 | □□□□□ -1.85 | | |
| BEGAIN | Q9BUH8 | ATP6V0E1P1-201 | ENST00000412537 | 226 nt | BASIC | 3.47 | □□□□□ -1.85 | | |
| BEGAIN | Q9BUH8 | GABRG2-215 | ENST00000639213 | 9960 nt | TSL 1 (best) BASIC | 3.47 | □□□□□ -1.85 | | |
| BEGAIN | Q9BUH8 | SCN1A-219 | ENST00000641575 | 12874 nt | APPRIS ALT1 BASIC | 3.46 | □□□□□ -1.85 | | |
| BEGAIN | Q9BUH8 | ZFYVE16-202 | ENST00000505560 | 6599 nt | APPRIS P1 TSL 1 (best) BASIC | 3.46 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | ZMYM2-203 | ENST00000382874 | 10139 nt | APPRIS P1 TSL 1 (best) BASIC | 3.46 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | ZNF658B-202 | ENST00000615961 | 3375 nt | BASIC | 3.46 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | RNU6-859P-201 | ENST00000362728 | 107 nt | BASIC | 3.46 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | RNU1-148P-201 | ENST00000384472 | 162 nt | BASIC | 3.46 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | RNU6-816P-201 | ENST00000390914 | 107 nt | BASIC | 3.46 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | RNU11-3P-201 | ENST00000391111 | 133 nt | BASIC | 3.46 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | RNU6-1268P-201 | ENST00000391214 | 107 nt | BASIC | 3.46 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | U8.16-201 | ENST00000391279 | 133 nt | BASIC | 3.46 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | RNU6-1239P-201 | ENST00000391310 | 107 nt | BASIC | 3.46 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | SNORA19.1-201 | ENST00000410656 | 129 nt | BASIC | 3.46 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | AL591806.2-201 | ENST00000433122 | 173 nt | BASIC | 3.46 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | HSPE1P9-201 | ENST00000440046 | 311 nt | BASIC | 3.46 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | RNA5SP137-201 | ENST00000516833 | 135 nt | BASIC | 3.46 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | AC021785.1-201 | ENST00000520780 | 453 nt | TSL 3 BASIC | 3.46 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | ZNF861P-201 | ENST00000588126 | 639 nt | BASIC | 3.46 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | MALAT1-207 | ENST00000613376 | 132 nt | TSL 3 BASIC | 3.46 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | AC021613.1-201 | ENST00000623880 | 111 nt | BASIC | 3.46 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | VSTM2A-OT1-201 | ENST00000456049 | 3031 nt | TSL 1 (best) BASIC | 3.46 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | AASDH-207 | ENST00000513376 | 3241 nt | TSL 1 (best) BASIC | 3.46 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | PRKACB-218 | ENST00000610703 | 4240 nt | TSL 2 BASIC | 3.46 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | NEB-218 | ENST00000603639 | 25578 nt | APPRIS ALT2 TSL 5 BASIC | 3.45 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | NEB-219 | ENST00000604864 | 25578 nt | APPRIS ALT2 TSL 5 BASIC | 3.45 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | FAM184A-202 | ENST00000352896 | 3700 nt | APPRIS ALT1 TSL 1 (best) BASIC | 3.45 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | Y_RNA.220-201 | ENST00000364244 | 109 nt | BASIC | 3.45 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | SNORA1.2-201 | ENST00000365189 | 134 nt | BASIC | 3.45 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | MTATP8P2-201 | ENST00000435212 | 202 nt | BASIC | 3.45 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | RNA5SP168-201 | ENST00000516642 | 112 nt | BASIC | 3.45 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | HOTAIRM1_4.1-201 | ENST00000617934 | 102 nt | BASIC | 3.45 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | PRKG1-205 | ENST00000401604 | 5922 nt | TSL 5 BASIC | 3.45 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | CACNB4-238 | ENST00000636901 | 7706 nt | TSL 5 BASIC | 3.45 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | SNORA63D-201 | ENST00000364359 | 132 nt | BASIC | 3.44 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | AC092783.1-201 | ENST00000435832 | 231 nt | TSL 3 BASIC | 3.44 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | RNU7-12P-201 | ENST00000516030 | 62 nt | BASIC | 3.44 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | RNU6-844P-201 | ENST00000517175 | 102 nt | BASIC | 3.44 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | RNU7-181P-201 | ENST00000517234 | 74 nt | BASIC | 3.44 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | AC007336.1-201 | ENST00000576365 | 3828 nt | BASIC | 3.44 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | POSTN-209 | ENST00000541179 | 3214 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.43 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | Y_RNA.93-201 | ENST00000363066 | 109 nt | BASIC | 3.43 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | RNU4-36P-201 | ENST00000364294 | 144 nt | BASIC | 3.43 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | Y_RNA.494-201 | ENST00000384432 | 111 nt | BASIC | 3.43 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | TRAV39-201 | ENST00000390466 | 331 nt | APPRIS P1 BASIC | 3.43 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | RNU6-893P-201 | ENST00000458841 | 100 nt | BASIC | 3.43 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | RNU7-26P-201 | ENST00000458980 | 63 nt | BASIC | 3.43 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | RNU2-11P-201 | ENST00000459191 | 187 nt | BASIC | 3.43 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | RPS23P4-201 | ENST00000487908 | 423 nt | BASIC | 3.43 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | AC004812.1-201 | ENST00000540773 | 146 nt | BASIC | 3.43 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | IGKV1OR2-6-201 | ENST00000603485 | 277 nt | BASIC | 3.43 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | MIR6817-201 | ENST00000615588 | 66 nt | BASIC | 3.43 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | CACNB4-222 | ENST00000636350 | 7654 nt | TSL 5 BASIC | 3.43 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | GPR22-201 | ENST00000304402 | 2942 nt | APPRIS P1 TSL 1 (best) BASIC | 3.43 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | ZNF567-201 | ENST00000360729 | 2691 nt | TSL 1 (best) BASIC | 3.42 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | RNU6-661P-201 | ENST00000362409 | 107 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | RNA5SP68-201 | ENST00000363885 | 119 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | SNORA38-201 | ENST00000363946 | 132 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | Y_RNA.299-201 | ENST00000364973 | 94 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | MIR488-201 | ENST00000365739 | 83 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | Y_RNA.507-201 | ENST00000384500 | 99 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | Y_RNA.531-201 | ENST00000384589 | 121 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | MIR597-201 | ENST00000384968 | 97 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | MIR452-201 | ENST00000385020 | 85 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | SNORA26.2-201 | ENST00000390922 | 122 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | SNORA3.2-201 | ENST00000408221 | 125 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | RNU6ATAC12P-201 | ENST00000516542 | 115 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | DEFB131E-201 | ENST00000532329 | 154 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | AC011124.2-201 | ENST00000518739 | 3222 nt | TSL 1 (best) BASIC | 3.42 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | SENP7-201 | ENST00000314261 | 4736 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.41 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | MGAT4C-210 | ENST00000620241 | 3194 nt | APPRIS P1 TSL 2 BASIC | 3.41 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | JMJD1C-210 | ENST00000542921 | 8149 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.41 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | AC108206.1-201 | ENST00000570186 | 4159 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | SNORA70.7-201 | ENST00000384159 | 133 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | RNU6-1031P-201 | ENST00000384773 | 107 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | RPS3AP1-201 | ENST00000413190 | 320 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | AL512326.2-201 | ENST00000426359 | 151 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| BEGAIN | Q9BUH8 | RN7SL442P-201 | ENST00000473804 | 320 nt | BASIC | 3.41 | □□□□□ -1.86 | | |