Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.14□□□□□ -2.07
NDC1Q9BTX1 SNORD45.4-201ENST00000516629 73 ntBASIC2.14□□□□□ -2.07
NDC1Q9BTX1 SUB1P4-201ENST00000566062 339 ntBASIC2.14□□□□□ -2.07
NDC1Q9BTX1 SNORA28-201ENST00000606769 126 ntBASIC2.14□□□□□ -2.07
NDC1Q9BTX1 AC245884.12-201ENST00000615364 59 ntBASIC2.14□□□□□ -2.07
NDC1Q9BTX1 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.14□□□□□ -2.07
NDC1Q9BTX1 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
NDC1Q9BTX1 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.14□□□□□ -2.07
NDC1Q9BTX1 AC005336.3-201ENST00000623833 2679 ntBASIC2.14□□□□□ -2.07
NDC1Q9BTX1 RNU6-268P-201ENST00000364174 107 ntBASIC2.13□□□□□ -2.07
NDC1Q9BTX1 SNORA63D-201ENST00000364359 132 ntBASIC2.13□□□□□ -2.07
NDC1Q9BTX1 MIR221-201ENST00000385135 110 ntBASIC2.13□□□□□ -2.07
NDC1Q9BTX1 MIR524-201ENST00000385242 87 ntBASIC2.13□□□□□ -2.07
NDC1Q9BTX1 RN7SKP200-201ENST00000410564 320 ntBASIC2.13□□□□□ -2.07
NDC1Q9BTX1 RNA5SP450-201ENST00000411206 102 ntBASIC2.13□□□□□ -2.07
NDC1Q9BTX1 SUMO1P4-201ENST00000429430 302 ntBASIC2.13□□□□□ -2.07
NDC1Q9BTX1 SNRPGP14-201ENST00000435400 219 ntBASIC2.13□□□□□ -2.07
NDC1Q9BTX1 AF228730.3-201ENST00000436691 102 ntBASIC2.13□□□□□ -2.07
NDC1Q9BTX1 STAG3L5P-204ENST00000443759 179 ntBASIC2.13□□□□□ -2.07
NDC1Q9BTX1 RNU6-237P-201ENST00000515985 71 ntBASIC2.13□□□□□ -2.07
NDC1Q9BTX1 SNORA31.10-201ENST00000516482 106 ntBASIC2.13□□□□□ -2.07
NDC1Q9BTX1 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.13□□□□□ -2.07
NDC1Q9BTX1 MIR5194-201ENST00000582634 120 ntBASIC2.13□□□□□ -2.07
NDC1Q9BTX1 AC006441.5-201ENST00000612680 209 ntBASIC2.13□□□□□ -2.07
NDC1Q9BTX1 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
NDC1Q9BTX1 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
NDC1Q9BTX1 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
NDC1Q9BTX1 AC007336.1-201ENST00000576365 3828 ntBASIC2.12□□□□□ -2.07
NDC1Q9BTX1 RNA5SP393-201ENST00000363423 117 ntBASIC2.12□□□□□ -2.07
NDC1Q9BTX1 RNU1-138P-201ENST00000384093 164 ntBASIC2.12□□□□□ -2.07
NDC1Q9BTX1 MIR548O-201ENST00000408583 114 ntBASIC2.12□□□□□ -2.07
NDC1Q9BTX1 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.12□□□□□ -2.07
NDC1Q9BTX1 MIR4769-201ENST00000584126 77 ntBASIC2.12□□□□□ -2.07
NDC1Q9BTX1 AC078899.2-201ENST00000595282 212 ntBASIC2.12□□□□□ -2.07
NDC1Q9BTX1 AL049779.4-201ENST00000604500 156 ntBASIC2.12□□□□□ -2.07
NDC1Q9BTX1 AL022345.2-201ENST00000606307 135 ntBASIC2.12□□□□□ -2.07
NDC1Q9BTX1 MIR376A2-201ENST00000636782 80 ntBASIC2.12□□□□□ -2.07
NDC1Q9BTX1 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
NDC1Q9BTX1 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
NDC1Q9BTX1 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
NDC1Q9BTX1 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
NDC1Q9BTX1 RNU6-834P-201ENST00000362367 110 ntBASIC2.11□□□□□ -2.07
NDC1Q9BTX1 RNU6-112P-201ENST00000363599 104 ntBASIC2.11□□□□□ -2.07
NDC1Q9BTX1 RNU6-1325P-201ENST00000364905 105 ntBASIC2.11□□□□□ -2.07
NDC1Q9BTX1 HSPE1P9-201ENST00000440046 311 ntBASIC2.11□□□□□ -2.07
NDC1Q9BTX1 Y_RNA.651-201ENST00000459380 103 ntBASIC2.11□□□□□ -2.07
NDC1Q9BTX1 RNA5SP236-201ENST00000516169 116 ntBASIC2.11□□□□□ -2.07
NDC1Q9BTX1 RNU6-1061P-201ENST00000516530 99 ntBASIC2.11□□□□□ -2.07
NDC1Q9BTX1 RNU7-25P-201ENST00000516544 62 ntBASIC2.11□□□□□ -2.07
NDC1Q9BTX1 RNU6-1116P-201ENST00000517269 99 ntBASIC2.11□□□□□ -2.07
NDC1Q9BTX1 AC133485.4-201ENST00000561835 220 ntBASIC2.11□□□□□ -2.07
NDC1Q9BTX1 AC138907.4-201ENST00000570107 226 ntBASIC2.11□□□□□ -2.07
NDC1Q9BTX1 MIR3914-2-201ENST00000637339 95 ntBASIC2.11□□□□□ -2.07
NDC1Q9BTX1 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
NDC1Q9BTX1 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
NDC1Q9BTX1 AL391516.1-201ENST00000554380 2449 ntBASIC2.1□□□□□ -2.07
NDC1Q9BTX1 RNU6-647P-201ENST00000364243 107 ntBASIC2.1□□□□□ -2.07
NDC1Q9BTX1 Y_RNA.336-201ENST00000365307 109 ntBASIC2.1□□□□□ -2.07
NDC1Q9BTX1 RNU6-1056P-201ENST00000383996 107 ntBASIC2.1□□□□□ -2.07
NDC1Q9BTX1 SNORA40.5-201ENST00000391061 128 ntBASIC2.1□□□□□ -2.07
NDC1Q9BTX1 MIR1289-2-201ENST00000408360 111 ntBASIC2.1□□□□□ -2.07
NDC1Q9BTX1 Y_RNA.630-201ENST00000411370 108 ntBASIC2.1□□□□□ -2.07
NDC1Q9BTX1 MTATP6P21-201ENST00000440681 189 ntBASIC2.1□□□□□ -2.07
NDC1Q9BTX1 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.1□□□□□ -2.07
NDC1Q9BTX1 RNA5SP200-201ENST00000516360 103 ntBASIC2.1□□□□□ -2.07
NDC1Q9BTX1 RNU6-1149P-201ENST00000516810 97 ntBASIC2.1□□□□□ -2.07
NDC1Q9BTX1 RNU2-19P-201ENST00000517288 84 ntBASIC2.1□□□□□ -2.07
NDC1Q9BTX1 AC134878.1-201ENST00000619901 243 ntBASIC2.1□□□□□ -2.07
NDC1Q9BTX1 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.1□□□□□ -2.07
NDC1Q9BTX1 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
NDC1Q9BTX1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
NDC1Q9BTX1 MIRLET7C-201ENST00000362160 84 ntBASIC2.09□□□□□ -2.07
NDC1Q9BTX1 SNORA67.1-201ENST00000364749 141 ntBASIC2.09□□□□□ -2.07
NDC1Q9BTX1 SNORA4.2-201ENST00000365313 147 ntBASIC2.09□□□□□ -2.07
NDC1Q9BTX1 RNU6-44P-201ENST00000384045 107 ntBASIC2.09□□□□□ -2.07
NDC1Q9BTX1 Y_RNA.547-201ENST00000384654 119 ntBASIC2.09□□□□□ -2.07
NDC1Q9BTX1 AL034345.1-201ENST00000407768 123 ntBASIC2.09□□□□□ -2.07
NDC1Q9BTX1 SNORD23.1-201ENST00000408212 104 ntBASIC2.09□□□□□ -2.07
NDC1Q9BTX1 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.09□□□□□ -2.07
NDC1Q9BTX1 RPL23AP63-201ENST00000498752 471 ntBASIC2.09□□□□□ -2.07
NDC1Q9BTX1 AC114811.1-201ENST00000507207 168 ntBASIC2.09□□□□□ -2.07
NDC1Q9BTX1 RNU6-919P-201ENST00000516731 104 ntBASIC2.09□□□□□ -2.07
NDC1Q9BTX1 RNA5SP481-201ENST00000516814 122 ntBASIC2.09□□□□□ -2.07
NDC1Q9BTX1 SCARNA15-202ENST00000516881 127 ntBASIC2.09□□□□□ -2.07
NDC1Q9BTX1 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.09□□□□□ -2.07
NDC1Q9BTX1 AC009831.4-201ENST00000620744 325 ntBASIC2.09□□□□□ -2.07
NDC1Q9BTX1 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.09□□□□□ -2.07
NDC1Q9BTX1 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
NDC1Q9BTX1 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.08
NDC1Q9BTX1 RNU6-163P-201ENST00000384396 106 ntBASIC2.08□□□□□ -2.08
NDC1Q9BTX1 RNU6-296P-201ENST00000384608 107 ntBASIC2.08□□□□□ -2.08
NDC1Q9BTX1 RNU6-1064P-201ENST00000410626 104 ntBASIC2.08□□□□□ -2.08
NDC1Q9BTX1 Y_RNA.617-201ENST00000410920 90 ntBASIC2.08□□□□□ -2.08
NDC1Q9BTX1 AL035461.1-201ENST00000421490 332 ntBASIC2.08□□□□□ -2.08
NDC1Q9BTX1 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.08□□□□□ -2.08
NDC1Q9BTX1 RNU6-781P-201ENST00000516377 101 ntBASIC2.08□□□□□ -2.08
NDC1Q9BTX1 MIR5197-201ENST00000583721 112 ntBASIC2.08□□□□□ -2.08
NDC1Q9BTX1 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.08□□□□□ -2.08
NDC1Q9BTX1 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.08□□□□□ -2.08
NDC1Q9BTX1 ZNF720P1-201ENST00000562403 1939 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 550.9 ms