Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 MTND5P34-201ENST00000568888 325 ntBASIC2.27□□□□□ -2.05
LRFN3Q9BTN0 MIR3121-201ENST00000579680 77 ntBASIC2.27□□□□□ -2.05
LRFN3Q9BTN0 AC131055.1-201ENST00000584626 316 ntBASIC2.27□□□□□ -2.05
LRFN3Q9BTN0 AC097639.2-201ENST00000603159 172 ntBASIC2.27□□□□□ -2.05
LRFN3Q9BTN0 AC073413.2-201ENST00000604332 360 ntBASIC2.27□□□□□ -2.05
LRFN3Q9BTN0 MIR6734-201ENST00000621166 68 ntBASIC2.27□□□□□ -2.05
LRFN3Q9BTN0 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.27□□□□□ -2.05
LRFN3Q9BTN0 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.27□□□□□ -2.05
LRFN3Q9BTN0 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
LRFN3Q9BTN0 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
LRFN3Q9BTN0 AC018630.2-201ENST00000534866 2403 ntBASIC2.26□□□□□ -2.05
LRFN3Q9BTN0 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LRFN3Q9BTN0 Y_RNA.114-201ENST00000363265 113 ntBASIC2.26□□□□□ -2.05
LRFN3Q9BTN0 MIR520A-201ENST00000384862 85 ntBASIC2.26□□□□□ -2.05
LRFN3Q9BTN0 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
LRFN3Q9BTN0 RNA5SP212-201ENST00000391223 107 ntBASIC2.26□□□□□ -2.05
LRFN3Q9BTN0 AC019129.1-201ENST00000403786 261 ntBASIC2.26□□□□□ -2.05
LRFN3Q9BTN0 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.26□□□□□ -2.05
LRFN3Q9BTN0 CYCTP-201ENST00000504253 315 ntBASIC2.26□□□□□ -2.05
LRFN3Q9BTN0 RNU6-589P-201ENST00000516485 107 ntBASIC2.26□□□□□ -2.05
LRFN3Q9BTN0 RNU2-60P-201ENST00000517290 128 ntBASIC2.26□□□□□ -2.05
LRFN3Q9BTN0 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.26□□□□□ -2.05
LRFN3Q9BTN0 AC011604.1-201ENST00000545978 196 ntBASIC2.26□□□□□ -2.05
LRFN3Q9BTN0 AC084364.2-201ENST00000546924 395 ntBASIC2.26□□□□□ -2.05
LRFN3Q9BTN0 SUB1P4-201ENST00000566062 339 ntBASIC2.26□□□□□ -2.05
LRFN3Q9BTN0 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.26□□□□□ -2.05
LRFN3Q9BTN0 U6.95-201ENST00000636931 70 ntBASIC2.26□□□□□ -2.05
LRFN3Q9BTN0 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.26□□□□□ -2.05
LRFN3Q9BTN0 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LRFN3Q9BTN0 RNA5SP210-201ENST00000391034 120 ntBASIC2.25□□□□□ -2.05
LRFN3Q9BTN0 Y_RNA.630-201ENST00000411370 108 ntBASIC2.25□□□□□ -2.05
LRFN3Q9BTN0 AC023449.1-201ENST00000454464 154 ntBASIC2.25□□□□□ -2.05
LRFN3Q9BTN0 AL163195.1-201ENST00000496941 348 ntBASIC2.25□□□□□ -2.05
LRFN3Q9BTN0 RNA5SP220-201ENST00000516298 104 ntBASIC2.25□□□□□ -2.05
LRFN3Q9BTN0 RNVU1-2-201ENST00000516326 135 ntBASIC2.25□□□□□ -2.05
LRFN3Q9BTN0 RNU6-1061P-201ENST00000516530 99 ntBASIC2.25□□□□□ -2.05
LRFN3Q9BTN0 RNU7-149P-201ENST00000516739 59 ntBASIC2.25□□□□□ -2.05
LRFN3Q9BTN0 RNU7-128P-201ENST00000517247 62 ntBASIC2.25□□□□□ -2.05
LRFN3Q9BTN0 AL078603.1-201ENST00000603824 313 ntBASIC2.25□□□□□ -2.05
LRFN3Q9BTN0 AC108081.1-201ENST00000604358 221 ntBASIC2.25□□□□□ -2.05
LRFN3Q9BTN0 Pinc.1-201ENST00000616452 154 ntBASIC2.25□□□□□ -2.05
LRFN3Q9BTN0 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
LRFN3Q9BTN0 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.25□□□□□ -2.05
LRFN3Q9BTN0 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LRFN3Q9BTN0 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
LRFN3Q9BTN0 RNU6-508P-201ENST00000363231 103 ntBASIC2.24□□□□□ -2.05
LRFN3Q9BTN0 AL603914.1-201ENST00000401964 204 ntBASIC2.24□□□□□ -2.05
LRFN3Q9BTN0 RNU2-7P-201ENST00000410794 178 ntBASIC2.24□□□□□ -2.05
LRFN3Q9BTN0 RNA5SP182-201ENST00000516064 82 ntBASIC2.24□□□□□ -2.05
LRFN3Q9BTN0 SNORD33.1-201ENST00000516213 88 ntBASIC2.24□□□□□ -2.05
LRFN3Q9BTN0 Y_RNA.690-201ENST00000516603 95 ntBASIC2.24□□□□□ -2.05
LRFN3Q9BTN0 RNA5SP481-201ENST00000516814 122 ntBASIC2.24□□□□□ -2.05
LRFN3Q9BTN0 AL358944.1-201ENST00000528537 144 ntBASIC2.24□□□□□ -2.05
LRFN3Q9BTN0 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.24□□□□□ -2.05
LRFN3Q9BTN0 AC133485.4-201ENST00000561835 220 ntBASIC2.24□□□□□ -2.05
LRFN3Q9BTN0 AC138907.4-201ENST00000570107 226 ntBASIC2.24□□□□□ -2.05
LRFN3Q9BTN0 MIR6079-201ENST00000635807 62 ntBASIC2.24□□□□□ -2.05
LRFN3Q9BTN0 U6.108-201ENST00000637764 58 ntBASIC2.24□□□□□ -2.05
LRFN3Q9BTN0 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
LRFN3Q9BTN0 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LRFN3Q9BTN0 MTND5P32-201ENST00000560711 1802 ntBASIC2.24□□□□□ -2.05
LRFN3Q9BTN0 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LRFN3Q9BTN0 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LRFN3Q9BTN0 Y_RNA.178-201ENST00000363832 102 ntBASIC2.23□□□□□ -2.05
LRFN3Q9BTN0 RNU6-755P-201ENST00000364400 103 ntBASIC2.23□□□□□ -2.05
LRFN3Q9BTN0 RNU6-309P-201ENST00000364573 106 ntBASIC2.23□□□□□ -2.05
LRFN3Q9BTN0 RNU6-1138P-201ENST00000365359 106 ntBASIC2.23□□□□□ -2.05
LRFN3Q9BTN0 SNORD18B-201ENST00000365659 72 ntBASIC2.23□□□□□ -2.05
LRFN3Q9BTN0 SNORA22-201ENST00000383907 134 ntBASIC2.23□□□□□ -2.05
LRFN3Q9BTN0 Y_RNA.486-201ENST00000384398 107 ntBASIC2.23□□□□□ -2.05
LRFN3Q9BTN0 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.23□□□□□ -2.05
LRFN3Q9BTN0 SNORD13-201ENST00000459299 104 ntBASIC2.23□□□□□ -2.05
LRFN3Q9BTN0 OR9P1P-201ENST00000496431 281 ntBASIC2.23□□□□□ -2.05
LRFN3Q9BTN0 RNU5E-3P-201ENST00000515913 68 ntBASIC2.23□□□□□ -2.05
LRFN3Q9BTN0 RNU6-341P-201ENST00000516973 96 ntBASIC2.23□□□□□ -2.05
LRFN3Q9BTN0 MIR4287-201ENST00000579398 78 ntBASIC2.23□□□□□ -2.05
LRFN3Q9BTN0 RNU6-1298P-201ENST00000362456 101 ntBASIC2.22□□□□□ -2.05
LRFN3Q9BTN0 Y_RNA.191-201ENST00000363972 113 ntBASIC2.22□□□□□ -2.05
LRFN3Q9BTN0 RNA5SP190-201ENST00000365222 118 ntBASIC2.22□□□□□ -2.05
LRFN3Q9BTN0 MIR144-201ENST00000384886 86 ntBASIC2.22□□□□□ -2.05
LRFN3Q9BTN0 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
LRFN3Q9BTN0 SNORA26-201ENST00000391286 122 ntBASIC2.22□□□□□ -2.05
LRFN3Q9BTN0 Y_RNA.617-201ENST00000410920 90 ntBASIC2.22□□□□□ -2.05
LRFN3Q9BTN0 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.22□□□□□ -2.05
LRFN3Q9BTN0 RNU6-1096P-201ENST00000517089 102 ntBASIC2.22□□□□□ -2.05
LRFN3Q9BTN0 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.22□□□□□ -2.05
LRFN3Q9BTN0 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
LRFN3Q9BTN0 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
LRFN3Q9BTN0 Y_RNA.52-201ENST00000362760 96 ntBASIC2.21□□□□□ -2.06
LRFN3Q9BTN0 Y_RNA.66-201ENST00000362862 102 ntBASIC2.21□□□□□ -2.06
LRFN3Q9BTN0 SNORA33-201ENST00000363664 130 ntBASIC2.21□□□□□ -2.06
LRFN3Q9BTN0 SNORA25.6-201ENST00000364121 118 ntBASIC2.21□□□□□ -2.06
LRFN3Q9BTN0 SNORA63D-201ENST00000364359 132 ntBASIC2.21□□□□□ -2.06
LRFN3Q9BTN0 SNORD58C-201ENST00000365223 64 ntBASIC2.21□□□□□ -2.06
LRFN3Q9BTN0 DEFA7P-201ENST00000382676 285 ntBASIC2.21□□□□□ -2.06
LRFN3Q9BTN0 RNA5SP57-201ENST00000459463 123 ntBASIC2.21□□□□□ -2.06
LRFN3Q9BTN0 RPL23AP63-201ENST00000498752 471 ntBASIC2.21□□□□□ -2.06
LRFN3Q9BTN0 SNORA18.4-201ENST00000516440 124 ntBASIC2.21□□□□□ -2.06
LRFN3Q9BTN0 RNU6-126P-201ENST00000516685 103 ntBASIC2.21□□□□□ -2.06
LRFN3Q9BTN0 RNA5SP82-201ENST00000516707 92 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms