Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 Y_RNA.638-201ENST00000459374 113 ntBASIC1.6□□□□□ -2.15
HERPUD2Q9BSE4 Y_RNA.637-201ENST00000459424 114 ntBASIC1.6□□□□□ -2.15
HERPUD2Q9BSE4 HMGN1P7-201ENST00000491722 313 ntBASIC1.6□□□□□ -2.15
HERPUD2Q9BSE4 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.6□□□□□ -2.15
HERPUD2Q9BSE4 AC114811.1-201ENST00000507207 168 ntBASIC1.6□□□□□ -2.15
HERPUD2Q9BSE4 MIR3144-201ENST00000579460 79 ntBASIC1.6□□□□□ -2.15
HERPUD2Q9BSE4 U6.106-201ENST00000636360 105 ntBASIC1.6□□□□□ -2.15
HERPUD2Q9BSE4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
HERPUD2Q9BSE4 MIR26B-201ENST00000362251 77 ntBASIC1.59□□□□□ -2.15
HERPUD2Q9BSE4 Y_RNA.233-201ENST00000364407 101 ntBASIC1.59□□□□□ -2.15
HERPUD2Q9BSE4 RNU6-81P-201ENST00000365608 104 ntBASIC1.59□□□□□ -2.15
HERPUD2Q9BSE4 RNY1P5-201ENST00000383890 115 ntBASIC1.59□□□□□ -2.15
HERPUD2Q9BSE4 Y_RNA.398-201ENST00000383952 99 ntBASIC1.59□□□□□ -2.15
HERPUD2Q9BSE4 Y_RNA.441-201ENST00000384123 112 ntBASIC1.59□□□□□ -2.15
HERPUD2Q9BSE4 AL603825.1-201ENST00000438481 80 ntBASIC1.59□□□□□ -2.15
HERPUD2Q9BSE4 RNU6-917P-201ENST00000516294 104 ntBASIC1.59□□□□□ -2.15
HERPUD2Q9BSE4 RNU6-191P-201ENST00000516295 94 ntBASIC1.59□□□□□ -2.15
HERPUD2Q9BSE4 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.59□□□□□ -2.15
HERPUD2Q9BSE4 AL357312.1-201ENST00000603879 298 ntBASIC1.59□□□□□ -2.15
HERPUD2Q9BSE4 AL008718.3-201ENST00000610217 321 ntBASIC1.59□□□□□ -2.15
HERPUD2Q9BSE4 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.59□□□□□ -2.15
HERPUD2Q9BSE4 snoU18.1-201ENST00000629629 71 ntBASIC1.59□□□□□ -2.15
HERPUD2Q9BSE4 Y_RNA.140-201ENST00000363474 103 ntBASIC1.58□□□□□ -2.16
HERPUD2Q9BSE4 RNU6-704P-201ENST00000364162 103 ntBASIC1.58□□□□□ -2.16
HERPUD2Q9BSE4 U8.5-201ENST00000364528 136 ntBASIC1.58□□□□□ -2.16
HERPUD2Q9BSE4 Y_RNA.291-201ENST00000364886 113 ntBASIC1.58□□□□□ -2.16
HERPUD2Q9BSE4 RNU6-1130P-201ENST00000365434 107 ntBASIC1.58□□□□□ -2.16
HERPUD2Q9BSE4 Y_RNA.435-201ENST00000384095 112 ntBASIC1.58□□□□□ -2.16
HERPUD2Q9BSE4 RNU6-131P-201ENST00000391144 107 ntBASIC1.58□□□□□ -2.16
HERPUD2Q9BSE4 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.58□□□□□ -2.16
HERPUD2Q9BSE4 AC117454.1-201ENST00000491120 168 ntBASIC1.58□□□□□ -2.16
HERPUD2Q9BSE4 RPL23AP54-201ENST00000495129 419 ntBASIC1.58□□□□□ -2.16
HERPUD2Q9BSE4 RNU6-947P-201ENST00000516264 106 ntBASIC1.58□□□□□ -2.16
HERPUD2Q9BSE4 RNA5SP61-201ENST00000516453 100 ntBASIC1.58□□□□□ -2.16
HERPUD2Q9BSE4 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.58□□□□□ -2.16
HERPUD2Q9BSE4 SNORD53B-201ENST00000577887 78 ntBASIC1.58□□□□□ -2.16
HERPUD2Q9BSE4 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.58□□□□□ -2.16
HERPUD2Q9BSE4 MIR4762-201ENST00000585261 75 ntBASIC1.58□□□□□ -2.16
HERPUD2Q9BSE4 Z83818.1-201ENST00000603584 150 ntBASIC1.58□□□□□ -2.16
HERPUD2Q9BSE4 AC072026.1-201ENST00000605023 201 ntBASIC1.58□□□□□ -2.16
HERPUD2Q9BSE4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.57□□□□□ -2.16
HERPUD2Q9BSE4 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
HERPUD2Q9BSE4 RNU4-80P-201ENST00000363200 141 ntBASIC1.57□□□□□ -2.16
HERPUD2Q9BSE4 RNU6-801P-201ENST00000364087 105 ntBASIC1.57□□□□□ -2.16
HERPUD2Q9BSE4 MIR452-201ENST00000385020 85 ntBASIC1.57□□□□□ -2.16
HERPUD2Q9BSE4 MIR522-201ENST00000385071 87 ntBASIC1.57□□□□□ -2.16
HERPUD2Q9BSE4 AC108667.1-201ENST00000428618 249 ntBASIC1.57□□□□□ -2.16
HERPUD2Q9BSE4 SNRPGP10-201ENST00000432323 225 ntBASIC1.57□□□□□ -2.16
HERPUD2Q9BSE4 RNU7-115P-201ENST00000516433 55 ntBASIC1.57□□□□□ -2.16
HERPUD2Q9BSE4 FAM106DP-201ENST00000586416 501 ntBASIC1.57□□□□□ -2.16
HERPUD2Q9BSE4 AP003357.1-201ENST00000604497 148 ntBASIC1.57□□□□□ -2.16
HERPUD2Q9BSE4 AC104465.1-201ENST00000611365 139 ntBASIC1.57□□□□□ -2.16
HERPUD2Q9BSE4 AC132825.6-201ENST00000638861 357 ntBASIC1.57□□□□□ -2.16
HERPUD2Q9BSE4 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.56□□□□□ -2.16
HERPUD2Q9BSE4 Y_RNA.304-201ENST00000365011 112 ntBASIC1.56□□□□□ -2.16
HERPUD2Q9BSE4 Y_RNA.308-201ENST00000365043 101 ntBASIC1.56□□□□□ -2.16
HERPUD2Q9BSE4 SNORD50.2-201ENST00000365465 70 ntBASIC1.56□□□□□ -2.16
HERPUD2Q9BSE4 RNU6-211P-201ENST00000384047 107 ntBASIC1.56□□□□□ -2.16
HERPUD2Q9BSE4 SNORA17.3-201ENST00000391159 129 ntBASIC1.56□□□□□ -2.16
HERPUD2Q9BSE4 RPL39P39-201ENST00000455840 151 ntBASIC1.56□□□□□ -2.16
HERPUD2Q9BSE4 AC136628.3-201ENST00000521868 290 ntBASIC1.56□□□□□ -2.16
HERPUD2Q9BSE4 AC019288.1-201ENST00000557918 224 ntBASIC1.56□□□□□ -2.16
HERPUD2Q9BSE4 BX248123.2-201ENST00000606318 124 ntBASIC1.56□□□□□ -2.16
HERPUD2Q9BSE4 JPX_2.1-201ENST00000614161 69 ntBASIC1.56□□□□□ -2.16
HERPUD2Q9BSE4 MIR548AY-201ENST00000617669 107 ntBASIC1.56□□□□□ -2.16
HERPUD2Q9BSE4 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.56□□□□□ -2.16
HERPUD2Q9BSE4 RNU6-1020P-201ENST00000363684 107 ntBASIC1.55□□□□□ -2.16
HERPUD2Q9BSE4 RNY1P11-201ENST00000363759 113 ntBASIC1.55□□□□□ -2.16
HERPUD2Q9BSE4 SNORA25.8-201ENST00000364831 128 ntBASIC1.55□□□□□ -2.16
HERPUD2Q9BSE4 U8.7-201ENST00000364940 136 ntBASIC1.55□□□□□ -2.16
HERPUD2Q9BSE4 snoU2-30.1-201ENST00000365012 70 ntBASIC1.55□□□□□ -2.16
HERPUD2Q9BSE4 Y_RNA.572-201ENST00000384757 98 ntBASIC1.55□□□□□ -2.16
HERPUD2Q9BSE4 MIR1304-201ENST00000408243 91 ntBASIC1.55□□□□□ -2.16
HERPUD2Q9BSE4 RPS29P29-201ENST00000456396 171 ntBASIC1.55□□□□□ -2.16
HERPUD2Q9BSE4 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.55□□□□□ -2.16
HERPUD2Q9BSE4 SNORD45.4-201ENST00000516629 73 ntBASIC1.55□□□□□ -2.16
HERPUD2Q9BSE4 AL645939.4-201ENST00000604495 135 ntBASIC1.55□□□□□ -2.16
HERPUD2Q9BSE4 Y_RNA.8-201ENST00000362353 102 ntBASIC1.54□□□□□ -2.16
HERPUD2Q9BSE4 RNA5SP327-201ENST00000362494 101 ntBASIC1.54□□□□□ -2.16
HERPUD2Q9BSE4 Y_RNA.203-201ENST00000364106 102 ntBASIC1.54□□□□□ -2.16
HERPUD2Q9BSE4 snoU2_19.4-201ENST00000364329 80 ntBASIC1.54□□□□□ -2.16
HERPUD2Q9BSE4 Y_RNA.412-201ENST00000384001 104 ntBASIC1.54□□□□□ -2.16
HERPUD2Q9BSE4 MIR517C-201ENST00000385103 95 ntBASIC1.54□□□□□ -2.16
HERPUD2Q9BSE4 SNORD41-201ENST00000386967 70 ntBASIC1.54□□□□□ -2.16
HERPUD2Q9BSE4 Y_RNA.580-201ENST00000391004 95 ntBASIC1.54□□□□□ -2.16
HERPUD2Q9BSE4 SNORA53-201ENST00000391141 249 ntBASIC1.54□□□□□ -2.16
HERPUD2Q9BSE4 SNORA26.5-201ENST00000391215 123 ntBASIC1.54□□□□□ -2.16
HERPUD2Q9BSE4 Y_RNA.590-201ENST00000410140 107 ntBASIC1.54□□□□□ -2.16
HERPUD2Q9BSE4 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.54□□□□□ -2.16
HERPUD2Q9BSE4 SCARNA8-201ENST00000515924 131 ntBASIC1.54□□□□□ -2.16
HERPUD2Q9BSE4 RNA5SP272-201ENST00000516095 111 ntBASIC1.54□□□□□ -2.16
HERPUD2Q9BSE4 RNU6-165P-201ENST00000517170 99 ntBASIC1.54□□□□□ -2.16
HERPUD2Q9BSE4 AC127455.1-201ENST00000565496 145 ntBASIC1.54□□□□□ -2.16
HERPUD2Q9BSE4 MIR5692C2-201ENST00000577959 77 ntBASIC1.54□□□□□ -2.16
HERPUD2Q9BSE4 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.54□□□□□ -2.16
HERPUD2Q9BSE4 AC108706.1-201ENST00000611053 297 ntBASIC1.54□□□□□ -2.16
HERPUD2Q9BSE4 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.54□□□□□ -2.16
HERPUD2Q9BSE4 RNU6-1272P-201ENST00000362776 107 ntBASIC1.53□□□□□ -2.16
HERPUD2Q9BSE4 RNU6-1048P-201ENST00000364054 107 ntBASIC1.53□□□□□ -2.16
HERPUD2Q9BSE4 MIR613-201ENST00000385248 95 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 292.7 ms