Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 Y_RNA.182-201ENST00000363880 111 ntBASIC1.7□□□□□ -2.14
PAAF1Q9BRP4 RNU6-60P-201ENST00000364792 103 ntBASIC1.7□□□□□ -2.14
PAAF1Q9BRP4 Y_RNA.336-201ENST00000365307 109 ntBASIC1.7□□□□□ -2.14
PAAF1Q9BRP4 RNU6-728P-201ENST00000365375 104 ntBASIC1.7□□□□□ -2.14
PAAF1Q9BRP4 RNY3P5-201ENST00000384127 102 ntBASIC1.7□□□□□ -2.14
PAAF1Q9BRP4 Y_RNA.571-201ENST00000384753 98 ntBASIC1.7□□□□□ -2.14
PAAF1Q9BRP4 MIR194-1-201ENST00000384892 85 ntBASIC1.7□□□□□ -2.14
PAAF1Q9BRP4 SCARNA8-201ENST00000515924 131 ntBASIC1.7□□□□□ -2.14
PAAF1Q9BRP4 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.7□□□□□ -2.14
PAAF1Q9BRP4 SNORA77B-201ENST00000578179 125 ntBASIC1.7□□□□□ -2.14
PAAF1Q9BRP4 MIR4662B-201ENST00000579498 81 ntBASIC1.7□□□□□ -2.14
PAAF1Q9BRP4 MIR4308-201ENST00000580634 81 ntBASIC1.7□□□□□ -2.14
PAAF1Q9BRP4 MIR4744-201ENST00000581563 82 ntBASIC1.7□□□□□ -2.14
PAAF1Q9BRP4 WWP1P1-201ENST00000466609 2769 ntBASIC1.69□□□□□ -2.14
PAAF1Q9BRP4 MIR452-201ENST00000385020 85 ntBASIC1.69□□□□□ -2.14
PAAF1Q9BRP4 SNORD72-201ENST00000390994 80 ntBASIC1.69□□□□□ -2.14
PAAF1Q9BRP4 SNORA79-201ENST00000408376 140 ntBASIC1.69□□□□□ -2.14
PAAF1Q9BRP4 AC108059.2-201ENST00000434626 151 ntBASIC1.69□□□□□ -2.14
PAAF1Q9BRP4 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.69□□□□□ -2.14
PAAF1Q9BRP4 AL121914.1-201ENST00000450188 156 ntBASIC1.69□□□□□ -2.14
PAAF1Q9BRP4 RNU6-1053P-201ENST00000515930 101 ntBASIC1.69□□□□□ -2.14
PAAF1Q9BRP4 RNU6-1299P-201ENST00000516316 100 ntBASIC1.69□□□□□ -2.14
PAAF1Q9BRP4 RNU6-126P-201ENST00000516685 103 ntBASIC1.69□□□□□ -2.14
PAAF1Q9BRP4 RNU6-794P-201ENST00000517261 64 ntBASIC1.69□□□□□ -2.14
PAAF1Q9BRP4 AP002392.1-201ENST00000537692 208 ntBASIC1.69□□□□□ -2.14
PAAF1Q9BRP4 DNAJC19P9-201ENST00000555084 351 ntBASIC1.69□□□□□ -2.14
PAAF1Q9BRP4 Y_RNA.29-201ENST00000362570 113 ntBASIC1.68□□□□□ -2.14
PAAF1Q9BRP4 RNU6-47P-201ENST00000383866 107 ntBASIC1.68□□□□□ -2.14
PAAF1Q9BRP4 SNORA26-201ENST00000391286 122 ntBASIC1.68□□□□□ -2.14
PAAF1Q9BRP4 RNU2-70P-201ENST00000410718 179 ntBASIC1.68□□□□□ -2.14
PAAF1Q9BRP4 AL161935.2-201ENST00000414627 60 ntBASIC1.68□□□□□ -2.14
PAAF1Q9BRP4 AC008834.1-201ENST00000511612 175 ntBASIC1.68□□□□□ -2.14
PAAF1Q9BRP4 SNORD77.4-201ENST00000516158 81 ntBASIC1.68□□□□□ -2.14
PAAF1Q9BRP4 AC024614.2-201ENST00000577584 372 ntBASIC1.68□□□□□ -2.14
PAAF1Q9BRP4 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.68□□□□□ -2.14
PAAF1Q9BRP4 AP000648.3-201ENST00000623539 4507 ntBASIC1.67□□□□□ -2.14
PAAF1Q9BRP4 Y_RNA.121-201ENST00000363309 113 ntBASIC1.67□□□□□ -2.14
PAAF1Q9BRP4 Y_RNA.432-201ENST00000384087 111 ntBASIC1.67□□□□□ -2.14
PAAF1Q9BRP4 SNORD38C-201ENST00000384381 69 ntBASIC1.67□□□□□ -2.14
PAAF1Q9BRP4 RNU6-918P-201ENST00000391219 106 ntBASIC1.67□□□□□ -2.14
PAAF1Q9BRP4 Y_RNA.676-201ENST00000516393 96 ntBASIC1.67□□□□□ -2.14
PAAF1Q9BRP4 Y_RNA.700-201ENST00000516806 100 ntBASIC1.67□□□□□ -2.14
PAAF1Q9BRP4 SNORA81.3-201ENST00000517283 198 ntBASIC1.67□□□□□ -2.14
PAAF1Q9BRP4 SNORD53B-201ENST00000577887 78 ntBASIC1.67□□□□□ -2.14
PAAF1Q9BRP4 MIR3668-201ENST00000582138 75 ntBASIC1.67□□□□□ -2.14
PAAF1Q9BRP4 BX248123.2-201ENST00000606318 124 ntBASIC1.67□□□□□ -2.14
PAAF1Q9BRP4 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.67□□□□□ -2.14
PAAF1Q9BRP4 uc_338.20-201ENST00000621563 178 ntBASIC1.67□□□□□ -2.14
PAAF1Q9BRP4 RNU6-1138P-201ENST00000365359 106 ntBASIC1.66□□□□□ -2.14
PAAF1Q9BRP4 MIR516B2-201ENST00000385190 85 ntBASIC1.66□□□□□ -2.14
PAAF1Q9BRP4 RNU6-578P-201ENST00000390980 103 ntBASIC1.66□□□□□ -2.14
PAAF1Q9BRP4 RNU2-55P-201ENST00000411146 174 ntBASIC1.66□□□□□ -2.14
PAAF1Q9BRP4 AC015922.2-201ENST00000435593 184 ntBASIC1.66□□□□□ -2.14
PAAF1Q9BRP4 AC079140.2-201ENST00000506193 142 ntBASIC1.66□□□□□ -2.14
PAAF1Q9BRP4 RNU6-322P-201ENST00000516010 103 ntBASIC1.66□□□□□ -2.14
PAAF1Q9BRP4 RNU6-365P-201ENST00000517113 106 ntBASIC1.66□□□□□ -2.14
PAAF1Q9BRP4 AC019176.1-201ENST00000518519 225 ntBASIC1.66□□□□□ -2.14
PAAF1Q9BRP4 MIR3937-201ENST00000580135 106 ntBASIC1.66□□□□□ -2.14
PAAF1Q9BRP4 FAM106DP-201ENST00000586416 501 ntBASIC1.66□□□□□ -2.14
PAAF1Q9BRP4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.66□□□□□ -2.14
PAAF1Q9BRP4 SNORD33-201ENST00000362761 85 ntBASIC1.65□□□□□ -2.15
PAAF1Q9BRP4 MIR136-201ENST00000385207 82 ntBASIC1.65□□□□□ -2.15
PAAF1Q9BRP4 RNU6-321P-201ENST00000410912 106 ntBASIC1.65□□□□□ -2.15
PAAF1Q9BRP4 RNU6-182P-201ENST00000516970 105 ntBASIC1.65□□□□□ -2.15
PAAF1Q9BRP4 AC022559.1-201ENST00000520905 205 ntBASIC1.65□□□□□ -2.15
PAAF1Q9BRP4 AC109810.1-201ENST00000534066 224 ntBASIC1.65□□□□□ -2.15
PAAF1Q9BRP4 AC015688.6-201ENST00000577737 104 ntBASIC1.65□□□□□ -2.15
PAAF1Q9BRP4 AC072026.1-201ENST00000605023 201 ntBASIC1.65□□□□□ -2.15
PAAF1Q9BRP4 AL512598.1-201ENST00000610158 273 ntBASIC1.65□□□□□ -2.15
PAAF1Q9BRP4 AC108706.1-201ENST00000611053 297 ntBASIC1.65□□□□□ -2.15
PAAF1Q9BRP4 SNORD45.3-201ENST00000363836 72 ntBASIC1.64□□□□□ -2.15
PAAF1Q9BRP4 Y_RNA.233-201ENST00000364407 101 ntBASIC1.64□□□□□ -2.15
PAAF1Q9BRP4 SNORD1A-201ENST00000364968 72 ntBASIC1.64□□□□□ -2.15
PAAF1Q9BRP4 MIR15B-201ENST00000385045 98 ntBASIC1.64□□□□□ -2.15
PAAF1Q9BRP4 SNORA67.6-201ENST00000391093 99 ntBASIC1.64□□□□□ -2.15
PAAF1Q9BRP4 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.64□□□□□ -2.15
PAAF1Q9BRP4 SNRPGP8-201ENST00000454064 226 ntBASIC1.64□□□□□ -2.15
PAAF1Q9BRP4 AC005840.1-201ENST00000498412 377 ntBASIC1.64□□□□□ -2.15
PAAF1Q9BRP4 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.64□□□□□ -2.15
PAAF1Q9BRP4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
PAAF1Q9BRP4 RNU6-268P-201ENST00000364174 107 ntBASIC1.63□□□□□ -2.15
PAAF1Q9BRP4 SNORA2.2-201ENST00000365473 135 ntBASIC1.63□□□□□ -2.15
PAAF1Q9BRP4 Y_RNA.486-201ENST00000384398 107 ntBASIC1.63□□□□□ -2.15
PAAF1Q9BRP4 RNU6-1065P-201ENST00000384513 106 ntBASIC1.63□□□□□ -2.15
PAAF1Q9BRP4 AL451046.2-201ENST00000403074 277 ntBASIC1.63□□□□□ -2.15
PAAF1Q9BRP4 SNX2P2-201ENST00000424553 323 ntBASIC1.63□□□□□ -2.15
PAAF1Q9BRP4 RNU6-561P-201ENST00000516222 102 ntBASIC1.63□□□□□ -2.15
PAAF1Q9BRP4 MIR4781-201ENST00000585250 76 ntBASIC1.63□□□□□ -2.15
PAAF1Q9BRP4 AL359821.1-201ENST00000605519 182 ntBASIC1.63□□□□□ -2.15
PAAF1Q9BRP4 AL365434.2-201ENST00000607979 234 ntBASIC1.63□□□□□ -2.15
PAAF1Q9BRP4 AC015726.2-201ENST00000620112 122 ntBASIC1.63□□□□□ -2.15
PAAF1Q9BRP4 U6.106-201ENST00000636360 105 ntBASIC1.63□□□□□ -2.15
PAAF1Q9BRP4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
PAAF1Q9BRP4 RNU6-275P-201ENST00000364910 107 ntBASIC1.62□□□□□ -2.15
PAAF1Q9BRP4 Y_RNA.785-201ENST00000384290 109 ntBASIC1.62□□□□□ -2.15
PAAF1Q9BRP4 AC092991.1-201ENST00000477176 376 ntBASIC1.62□□□□□ -2.15
PAAF1Q9BRP4 Y_RNA.666-201ENST00000516187 112 ntBASIC1.62□□□□□ -2.15
PAAF1Q9BRP4 AC090142.3-201ENST00000519012 385 ntBASIC1.62□□□□□ -2.15
PAAF1Q9BRP4 MIR4422-201ENST00000581938 83 ntBASIC1.62□□□□□ -2.15
PAAF1Q9BRP4 AC004792.1-201ENST00000614523 137 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 247.7 ms