Protein–RNA interactions for Protein: Q9BQT9

CLSTN3, Calsyntenin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3Q9BQT9 Y_RNA.191-201ENST00000363972 113 ntBASIC1.55□□□□□ -2.16
CLSTN3Q9BQT9 Y_RNA.262-201ENST00000364641 102 ntBASIC1.55□□□□□ -2.16
CLSTN3Q9BQT9 Y_RNA.304-201ENST00000365011 112 ntBASIC1.55□□□□□ -2.16
CLSTN3Q9BQT9 RNU6-442P-201ENST00000383968 104 ntBASIC1.55□□□□□ -2.16
CLSTN3Q9BQT9 Y_RNA.489-201ENST00000384410 101 ntBASIC1.55□□□□□ -2.16
CLSTN3Q9BQT9 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.55□□□□□ -2.16
CLSTN3Q9BQT9 PIGPP3-201ENST00000425307 415 ntBASIC1.55□□□□□ -2.16
CLSTN3Q9BQT9 RPL30P7-201ENST00000479312 323 ntBASIC1.55□□□□□ -2.16
CLSTN3Q9BQT9 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.55□□□□□ -2.16
CLSTN3Q9BQT9 SNORD116-28-201ENST00000516123 91 ntBASIC1.55□□□□□ -2.16
CLSTN3Q9BQT9 RNU6-902P-201ENST00000517212 91 ntBASIC1.55□□□□□ -2.16
CLSTN3Q9BQT9 AC090049.2-201ENST00000550377 109 ntBASIC1.55□□□□□ -2.16
CLSTN3Q9BQT9 AC011921.3-201ENST00000605540 361 ntBASIC1.55□□□□□ -2.16
CLSTN3Q9BQT9 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CLSTN3Q9BQT9 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.54□□□□□ -2.16
CLSTN3Q9BQT9 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CLSTN3Q9BQT9 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CLSTN3Q9BQT9 RNU4-10P-201ENST00000364383 140 ntBASIC1.54□□□□□ -2.16
CLSTN3Q9BQT9 Y_RNA.292-201ENST00000364904 97 ntBASIC1.54□□□□□ -2.16
CLSTN3Q9BQT9 RNU6-997P-201ENST00000384725 107 ntBASIC1.54□□□□□ -2.16
CLSTN3Q9BQT9 MIR626-201ENST00000385032 94 ntBASIC1.54□□□□□ -2.16
CLSTN3Q9BQT9 MIR653-201ENST00000385279 96 ntBASIC1.54□□□□□ -2.16
CLSTN3Q9BQT9 MIR1278-201ENST00000408753 81 ntBASIC1.54□□□□□ -2.16
CLSTN3Q9BQT9 MIR4662B-201ENST00000579498 81 ntBASIC1.54□□□□□ -2.16
CLSTN3Q9BQT9 AL442067.1-201ENST00000613261 223 ntBASIC1.54□□□□□ -2.16
CLSTN3Q9BQT9 AL121890.5-201ENST00000620848 304 ntBASIC1.54□□□□□ -2.16
CLSTN3Q9BQT9 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CLSTN3Q9BQT9 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CLSTN3Q9BQT9 RNU6-379P-201ENST00000363813 104 ntBASIC1.53□□□□□ -2.16
CLSTN3Q9BQT9 SNORD50B-201ENST00000364995 70 ntBASIC1.53□□□□□ -2.16
CLSTN3Q9BQT9 SNORD38C-201ENST00000384381 69 ntBASIC1.53□□□□□ -2.16
CLSTN3Q9BQT9 AL451046.2-201ENST00000403074 277 ntBASIC1.53□□□□□ -2.16
CLSTN3Q9BQT9 RNU6-383P-201ENST00000410864 94 ntBASIC1.53□□□□□ -2.16
CLSTN3Q9BQT9 SNORD11-201ENST00000459124 84 ntBASIC1.53□□□□□ -2.16
CLSTN3Q9BQT9 RNU4-71P-201ENST00000516258 113 ntBASIC1.53□□□□□ -2.16
CLSTN3Q9BQT9 RNA5SP220-201ENST00000516298 104 ntBASIC1.53□□□□□ -2.16
CLSTN3Q9BQT9 RNU6-1116P-201ENST00000517269 99 ntBASIC1.53□□□□□ -2.16
CLSTN3Q9BQT9 MIR4452-201ENST00000583004 71 ntBASIC1.53□□□□□ -2.16
CLSTN3Q9BQT9 uc_338.4-201ENST00000616635 176 ntBASIC1.53□□□□□ -2.16
CLSTN3Q9BQT9 AL365265.1-201ENST00000621045 234 ntBASIC1.53□□□□□ -2.16
CLSTN3Q9BQT9 RNY3P5-201ENST00000384127 102 ntBASIC1.52□□□□□ -2.17
CLSTN3Q9BQT9 Y_RNA.476-201ENST00000384347 108 ntBASIC1.52□□□□□ -2.17
CLSTN3Q9BQT9 MIR136-201ENST00000385207 82 ntBASIC1.52□□□□□ -2.17
CLSTN3Q9BQT9 AC093850.1-201ENST00000454121 251 ntBASIC1.52□□□□□ -2.17
CLSTN3Q9BQT9 COX6CP14-201ENST00000469580 174 ntBASIC1.52□□□□□ -2.17
CLSTN3Q9BQT9 AC100767.1-201ENST00000528178 123 ntBASIC1.52□□□□□ -2.17
CLSTN3Q9BQT9 AC008507.4-201ENST00000585464 127 ntBASIC1.52□□□□□ -2.17
CLSTN3Q9BQT9 AL078603.1-201ENST00000603824 313 ntBASIC1.52□□□□□ -2.17
CLSTN3Q9BQT9 AL357312.1-201ENST00000603879 298 ntBASIC1.52□□□□□ -2.17
CLSTN3Q9BQT9 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.52□□□□□ -2.17
CLSTN3Q9BQT9 AC106754.2-201ENST00000623006 233 ntBASIC1.52□□□□□ -2.17
CLSTN3Q9BQT9 Y_RNA.24-201ENST00000362508 103 ntBASIC1.51□□□□□ -2.17
CLSTN3Q9BQT9 U8.1-201ENST00000362843 134 ntBASIC1.51□□□□□ -2.17
CLSTN3Q9BQT9 RNY4P28-201ENST00000365281 93 ntBASIC1.51□□□□□ -2.17
CLSTN3Q9BQT9 Y_RNA.572-201ENST00000384757 98 ntBASIC1.51□□□□□ -2.17
CLSTN3Q9BQT9 RNU1-123P-201ENST00000458950 160 ntBASIC1.51□□□□□ -2.17
CLSTN3Q9BQT9 NDUFA4P2-201ENST00000489989 244 ntBASIC1.51□□□□□ -2.17
CLSTN3Q9BQT9 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.51□□□□□ -2.17
CLSTN3Q9BQT9 AL365434.2-201ENST00000607979 234 ntBASIC1.51□□□□□ -2.17
CLSTN3Q9BQT9 AL021707.8-201ENST00000609428 183 ntBASIC1.51□□□□□ -2.17
CLSTN3Q9BQT9 AL157834.3-201ENST00000615543 103 ntBASIC1.51□□□□□ -2.17
CLSTN3Q9BQT9 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.51□□□□□ -2.17
CLSTN3Q9BQT9 RNU6-653P-201ENST00000363074 106 ntBASIC1.5□□□□□ -2.17
CLSTN3Q9BQT9 RNY1-201ENST00000364228 113 ntBASIC1.5□□□□□ -2.17
CLSTN3Q9BQT9 MIR1298-201ENST00000408783 112 ntBASIC1.5□□□□□ -2.17
CLSTN3Q9BQT9 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.5□□□□□ -2.17
CLSTN3Q9BQT9 AC092991.1-201ENST00000477176 376 ntBASIC1.5□□□□□ -2.17
CLSTN3Q9BQT9 RNU6-388P-201ENST00000517012 105 ntBASIC1.5□□□□□ -2.17
CLSTN3Q9BQT9 RNU6-389P-201ENST00000517048 105 ntBASIC1.5□□□□□ -2.17
CLSTN3Q9BQT9 AC019176.1-201ENST00000518519 225 ntBASIC1.5□□□□□ -2.17
CLSTN3Q9BQT9 GHRLOS.1-201ENST00000610995 70 ntBASIC1.5□□□□□ -2.17
CLSTN3Q9BQT9 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.5□□□□□ -2.17
CLSTN3Q9BQT9 AL353770.2-201ENST00000620024 78 ntBASIC1.5□□□□□ -2.17
CLSTN3Q9BQT9 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
CLSTN3Q9BQT9 RNU6-1138P-201ENST00000365359 106 ntBASIC1.49□□□□□ -2.17
CLSTN3Q9BQT9 SNORA26-201ENST00000391286 122 ntBASIC1.49□□□□□ -2.17
CLSTN3Q9BQT9 RNU2-55P-201ENST00000411146 174 ntBASIC1.49□□□□□ -2.17
CLSTN3Q9BQT9 AC015922.2-201ENST00000435593 184 ntBASIC1.49□□□□□ -2.17
CLSTN3Q9BQT9 SNRPGP13-201ENST00000442212 177 ntBASIC1.49□□□□□ -2.17
CLSTN3Q9BQT9 RN7SKP164-201ENST00000516138 266 ntBASIC1.49□□□□□ -2.17
CLSTN3Q9BQT9 RNU6-970P-201ENST00000516312 107 ntBASIC1.49□□□□□ -2.17
CLSTN3Q9BQT9 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.49□□□□□ -2.17
CLSTN3Q9BQT9 FAM106DP-201ENST00000586416 501 ntBASIC1.49□□□□□ -2.17
CLSTN3Q9BQT9 AC078938.1-201ENST00000620993 318 ntBASIC1.49□□□□□ -2.17
CLSTN3Q9BQT9 RNU4-17P-201ENST00000365598 141 ntBASIC1.48□□□□□ -2.17
CLSTN3Q9BQT9 MIR616-201ENST00000385293 97 ntBASIC1.48□□□□□ -2.17
CLSTN3Q9BQT9 RNU6-1228P-201ENST00000391014 107 ntBASIC1.48□□□□□ -2.17
CLSTN3Q9BQT9 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.48□□□□□ -2.17
CLSTN3Q9BQT9 Y_RNA.626-201ENST00000411288 95 ntBASIC1.48□□□□□ -2.17
CLSTN3Q9BQT9 AC023790.1-201ENST00000482174 347 ntBASIC1.48□□□□□ -2.17
CLSTN3Q9BQT9 RNY3P16-201ENST00000516338 101 ntBASIC1.48□□□□□ -2.17
CLSTN3Q9BQT9 AL049861.1-201ENST00000603130 150 ntBASIC1.48□□□□□ -2.17
CLSTN3Q9BQT9 AL391903.3-201ENST00000612158 163 ntBASIC1.48□□□□□ -2.17
CLSTN3Q9BQT9 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CLSTN3Q9BQT9 RNU6-103P-201ENST00000363686 107 ntBASIC1.47□□□□□ -2.17
CLSTN3Q9BQT9 Y_RNA.229-201ENST00000364347 113 ntBASIC1.47□□□□□ -2.17
CLSTN3Q9BQT9 MIR613-201ENST00000385248 95 ntBASIC1.47□□□□□ -2.17
CLSTN3Q9BQT9 MIR320A-201ENST00000385302 82 ntBASIC1.47□□□□□ -2.17
CLSTN3Q9BQT9 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.47□□□□□ -2.17
CLSTN3Q9BQT9 Y_RNA.587-201ENST00000391210 103 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 227.1 ms