Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RNU6-342P-201ENST00000384521 104 ntBASIC3.24□□□□□ -1.89
USB1Q9BQ65 MIR34C-201ENST00000384831 77 ntBASIC3.24□□□□□ -1.89
USB1Q9BQ65 BX510359.4-201ENST00000423750 193 ntBASIC3.24□□□□□ -1.89
USB1Q9BQ65 CYCSP4-201ENST00000429682 331 ntBASIC3.24□□□□□ -1.89
USB1Q9BQ65 HMGN1P33-201ENST00000432945 451 ntBASIC3.24□□□□□ -1.89
USB1Q9BQ65 AC245047.7-201ENST00000440265 293 ntBASIC3.24□□□□□ -1.89
USB1Q9BQ65 SNORD123-201ENST00000459473 70 ntBASIC3.24□□□□□ -1.89
USB1Q9BQ65 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
USB1Q9BQ65 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
USB1Q9BQ65 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
USB1Q9BQ65 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
USB1Q9BQ65 Y_RNA.94-201ENST00000363068 106 ntBASIC3.23□□□□□ -1.89
USB1Q9BQ65 RNU6-1244P-201ENST00000363614 108 ntBASIC3.23□□□□□ -1.89
USB1Q9BQ65 RN7SL442P-201ENST00000473804 320 ntBASIC3.23□□□□□ -1.89
USB1Q9BQ65 RNU7-35P-201ENST00000517174 62 ntBASIC3.23□□□□□ -1.89
USB1Q9BQ65 U3.45-201ENST00000607547 219 ntBASIC3.23□□□□□ -1.89
USB1Q9BQ65 AC022202.1-201ENST00000613515 211 ntBASIC3.23□□□□□ -1.89
USB1Q9BQ65 AP003355.3-201ENST00000623465 114 ntBASIC3.23□□□□□ -1.89
USB1Q9BQ65 AC009093.8-201ENST00000641769 292 ntBASIC3.23□□□□□ -1.89
USB1Q9BQ65 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
USB1Q9BQ65 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.22□□□□□ -1.89
USB1Q9BQ65 AC005336.3-201ENST00000623833 2679 ntBASIC3.22□□□□□ -1.89
USB1Q9BQ65 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
USB1Q9BQ65 Y_RNA.567-201ENST00000384736 106 ntBASIC3.22□□□□□ -1.89
USB1Q9BQ65 MIR218-2-201ENST00000385006 110 ntBASIC3.22□□□□□ -1.89
USB1Q9BQ65 MIR670-201ENST00000390142 98 ntBASIC3.22□□□□□ -1.89
USB1Q9BQ65 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.22□□□□□ -1.89
USB1Q9BQ65 RNA5SP293-201ENST00000410527 113 ntBASIC3.22□□□□□ -1.89
USB1Q9BQ65 RNU6-579P-201ENST00000516879 102 ntBASIC3.22□□□□□ -1.89
USB1Q9BQ65 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.22□□□□□ -1.89
USB1Q9BQ65 MIR5195-201ENST00000583555 115 ntBASIC3.22□□□□□ -1.89
USB1Q9BQ65 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
USB1Q9BQ65 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
USB1Q9BQ65 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.22□□□□□ -1.89
USB1Q9BQ65 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
USB1Q9BQ65 RNU6-865P-201ENST00000364772 107 ntBASIC3.21□□□□□ -1.9
USB1Q9BQ65 RNU6-283P-201ENST00000364788 107 ntBASIC3.21□□□□□ -1.9
USB1Q9BQ65 Y_RNA.537-201ENST00000384626 109 ntBASIC3.21□□□□□ -1.9
USB1Q9BQ65 RNU6-1067P-201ENST00000384752 107 ntBASIC3.21□□□□□ -1.9
USB1Q9BQ65 MIR889-201ENST00000401280 79 ntBASIC3.21□□□□□ -1.9
USB1Q9BQ65 MIR548G-201ENST00000408442 89 ntBASIC3.21□□□□□ -1.9
USB1Q9BQ65 RPS29P4-201ENST00000414733 161 ntBASIC3.21□□□□□ -1.9
USB1Q9BQ65 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC3.21□□□□□ -1.9
USB1Q9BQ65 RNA5SP208-201ENST00000516156 78 ntBASIC3.21□□□□□ -1.9
USB1Q9BQ65 RNU6-90P-201ENST00000606352 106 ntBASIC3.21□□□□□ -1.9
USB1Q9BQ65 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
USB1Q9BQ65 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.21□□□□□ -1.9
USB1Q9BQ65 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
USB1Q9BQ65 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
USB1Q9BQ65 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
USB1Q9BQ65 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
USB1Q9BQ65 RNA5SP124-201ENST00000362739 110 ntBASIC3.2□□□□□ -1.9
USB1Q9BQ65 SNORD115-27-201ENST00000364430 82 ntBASIC3.2□□□□□ -1.9
USB1Q9BQ65 RNA5SP72-201ENST00000364442 117 ntBASIC3.2□□□□□ -1.9
USB1Q9BQ65 RNA5SP51-201ENST00000364750 119 ntBASIC3.2□□□□□ -1.9
USB1Q9BQ65 RNU1-109P-201ENST00000383960 147 ntBASIC3.2□□□□□ -1.9
USB1Q9BQ65 Y_RNA.448-201ENST00000384185 108 ntBASIC3.2□□□□□ -1.9
USB1Q9BQ65 AL161932.1-201ENST00000437408 146 ntBASIC3.2□□□□□ -1.9
USB1Q9BQ65 TRBV12-2-201ENST00000489763 344 ntBASIC3.2□□□□□ -1.9
USB1Q9BQ65 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
USB1Q9BQ65 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
USB1Q9BQ65 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
USB1Q9BQ65 RNU6-457P-201ENST00000363999 107 ntBASIC3.19□□□□□ -1.9
USB1Q9BQ65 SNORA73.2-201ENST00000364946 201 ntBASIC3.19□□□□□ -1.9
USB1Q9BQ65 RNU6-805P-201ENST00000365643 106 ntBASIC3.19□□□□□ -1.9
USB1Q9BQ65 RN7SKP111-201ENST00000410349 271 ntBASIC3.19□□□□□ -1.9
USB1Q9BQ65 RNU1-98P-201ENST00000458992 160 ntBASIC3.19□□□□□ -1.9
USB1Q9BQ65 snoU13.16-201ENST00000459350 104 ntBASIC3.19□□□□□ -1.9
USB1Q9BQ65 RNA5SP385-201ENST00000515947 110 ntBASIC3.19□□□□□ -1.9
USB1Q9BQ65 RN7SKP83-201ENST00000516512 178 ntBASIC3.19□□□□□ -1.9
USB1Q9BQ65 SCARNA16.3-201ENST00000516595 184 ntBASIC3.19□□□□□ -1.9
USB1Q9BQ65 MIR4738-201ENST00000579134 87 ntBASIC3.19□□□□□ -1.9
USB1Q9BQ65 MIR8055-201ENST00000610739 97 ntBASIC3.19□□□□□ -1.9
USB1Q9BQ65 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
USB1Q9BQ65 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
USB1Q9BQ65 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
USB1Q9BQ65 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
USB1Q9BQ65 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
USB1Q9BQ65 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
USB1Q9BQ65 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
USB1Q9BQ65 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.18□□□□□ -1.9
USB1Q9BQ65 RNU6-524P-201ENST00000384270 107 ntBASIC3.18□□□□□ -1.9
USB1Q9BQ65 MIR526A1-201ENST00000384897 85 ntBASIC3.18□□□□□ -1.9
USB1Q9BQ65 MIR597-201ENST00000384968 97 ntBASIC3.18□□□□□ -1.9
USB1Q9BQ65 RNA5SP171-201ENST00000391071 115 ntBASIC3.18□□□□□ -1.9
USB1Q9BQ65 RNU11-3P-201ENST00000391111 133 ntBASIC3.18□□□□□ -1.9
USB1Q9BQ65 RNU6-1086P-201ENST00000410930 100 ntBASIC3.18□□□□□ -1.9
USB1Q9BQ65 AC006989.1-201ENST00000427212 131 ntBASIC3.18□□□□□ -1.9
USB1Q9BQ65 SPINT5P-201ENST00000448174 155 ntBASIC3.18□□□□□ -1.9
USB1Q9BQ65 SNORD67.1-201ENST00000516618 108 ntBASIC3.18□□□□□ -1.9
USB1Q9BQ65 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.18□□□□□ -1.9
USB1Q9BQ65 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC3.18□□□□□ -1.9
USB1Q9BQ65 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
USB1Q9BQ65 Y_RNA.354-201ENST00000365448 111 ntBASIC3.17□□□□□ -1.9
USB1Q9BQ65 MIR34B-201ENST00000385076 84 ntBASIC3.17□□□□□ -1.9
USB1Q9BQ65 RNU6-788P-201ENST00000390967 104 ntBASIC3.17□□□□□ -1.9
USB1Q9BQ65 RPL31P63-201ENST00000422565 375 ntBASIC3.17□□□□□ -1.9
USB1Q9BQ65 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC3.17□□□□□ -1.9
USB1Q9BQ65 MIR4712-201ENST00000583750 82 ntBASIC3.17□□□□□ -1.9
USB1Q9BQ65 RPL12P50-201ENST00000603116 116 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms