Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 RNU1-36P-201ENST00000365130 165 ntBASIC0.87□□□□□ -2.27
RAB40CQ96S21 SNORA27.4-201ENST00000516650 95 ntBASIC0.87□□□□□ -2.27
RAB40CQ96S21 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.87□□□□□ -2.27
RAB40CQ96S21 MIR4781-201ENST00000585250 76 ntBASIC0.87□□□□□ -2.27
RAB40CQ96S21 AL020996.3-201ENST00000606617 222 ntBASIC0.87□□□□□ -2.27
RAB40CQ96S21 AC006441.5-201ENST00000612680 209 ntBASIC0.87□□□□□ -2.27
RAB40CQ96S21 MIR4251-201ENST00000635819 61 ntBASIC0.87□□□□□ -2.27
RAB40CQ96S21 AC068700.1-201ENST00000565862 3754 ntBASIC0.86□□□□□ -2.27
RAB40CQ96S21 Y_RNA.217-201ENST00000364214 105 ntBASIC0.86□□□□□ -2.27
RAB40CQ96S21 RNA5SP496-201ENST00000391240 109 ntBASIC0.86□□□□□ -2.27
RAB40CQ96S21 U8.17-201ENST00000391292 132 ntBASIC0.86□□□□□ -2.27
RAB40CQ96S21 MIR1185-1-201ENST00000408598 86 ntBASIC0.86□□□□□ -2.27
RAB40CQ96S21 AC113618.1-201ENST00000416747 285 ntBASIC0.86□□□□□ -2.27
RAB40CQ96S21 Y_RNA.641-201ENST00000459414 105 ntBASIC0.86□□□□□ -2.27
RAB40CQ96S21 AC005840.1-201ENST00000498412 377 ntBASIC0.86□□□□□ -2.27
RAB40CQ96S21 SERF1AP1-201ENST00000514575 187 ntBASIC0.86□□□□□ -2.27
RAB40CQ96S21 RNU6-1338P-201ENST00000516328 91 ntBASIC0.86□□□□□ -2.27
RAB40CQ96S21 SCARNA24.2-201ENST00000516968 130 ntBASIC0.86□□□□□ -2.27
RAB40CQ96S21 MIR4724-201ENST00000579485 89 ntBASIC0.86□□□□□ -2.27
RAB40CQ96S21 uc_338.4-201ENST00000616635 176 ntBASIC0.86□□□□□ -2.27
RAB40CQ96S21 SEPT14P17-201ENST00000617978 177 ntBASIC0.86□□□□□ -2.27
RAB40CQ96S21 AC022140.2-201ENST00000623500 188 ntBASIC0.86□□□□□ -2.27
RAB40CQ96S21 AC091895.1-201ENST00000624494 256 ntBASIC0.86□□□□□ -2.27
RAB40CQ96S21 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
RAB40CQ96S21 Y_RNA.4-201ENST00000362333 112 ntBASIC0.85□□□□□ -2.27
RAB40CQ96S21 MIR942-201ENST00000401111 86 ntBASIC0.85□□□□□ -2.27
RAB40CQ96S21 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.85□□□□□ -2.27
RAB40CQ96S21 PDCD5P2-201ENST00000507570 312 ntBASIC0.85□□□□□ -2.27
RAB40CQ96S21 RNU7-149P-201ENST00000516739 59 ntBASIC0.85□□□□□ -2.27
RAB40CQ96S21 RNU6-570P-201ENST00000517051 105 ntBASIC0.85□□□□□ -2.27
RAB40CQ96S21 RNU7-181P-201ENST00000517234 74 ntBASIC0.85□□□□□ -2.27
RAB40CQ96S21 AL049861.1-201ENST00000603130 150 ntBASIC0.85□□□□□ -2.27
RAB40CQ96S21 AL021707.8-201ENST00000609428 183 ntBASIC0.85□□□□□ -2.27
RAB40CQ96S21 AL008718.3-201ENST00000610217 321 ntBASIC0.85□□□□□ -2.27
RAB40CQ96S21 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
RAB40CQ96S21 UBE2WP1-201ENST00000362030 340 ntBASIC0.84□□□□□ -2.27
RAB40CQ96S21 RNU6-392P-201ENST00000364926 101 ntBASIC0.84□□□□□ -2.27
RAB40CQ96S21 RNU6-1067P-201ENST00000384752 107 ntBASIC0.84□□□□□ -2.27
RAB40CQ96S21 MIR570-201ENST00000384917 97 ntBASIC0.84□□□□□ -2.27
RAB40CQ96S21 RNU6-1203P-201ENST00000410703 110 ntBASIC0.84□□□□□ -2.27
RAB40CQ96S21 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.84□□□□□ -2.27
RAB40CQ96S21 snoU18.1-201ENST00000629629 71 ntBASIC0.84□□□□□ -2.27
RAB40CQ96S21 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.83□□□□□ -2.28
RAB40CQ96S21 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
RAB40CQ96S21 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
RAB40CQ96S21 RNU6-1187P-201ENST00000364771 110 ntBASIC0.83□□□□□ -2.28
RAB40CQ96S21 SNORA1.2-201ENST00000365189 134 ntBASIC0.83□□□□□ -2.28
RAB40CQ96S21 RNU6-713P-201ENST00000384761 107 ntBASIC0.83□□□□□ -2.28
RAB40CQ96S21 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.83□□□□□ -2.28
RAB40CQ96S21 RNU4-57P-201ENST00000515980 135 ntBASIC0.83□□□□□ -2.28
RAB40CQ96S21 DEFB108E-201ENST00000524692 240 ntBASIC0.83□□□□□ -2.28
RAB40CQ96S21 AC023827.1-201ENST00000569247 97 ntBASIC0.83□□□□□ -2.28
RAB40CQ96S21 AC211469.2-201ENST00000605461 205 ntBASIC0.83□□□□□ -2.28
RAB40CQ96S21 Y_RNA.802-201ENST00000614892 130 ntBASIC0.83□□□□□ -2.28
RAB40CQ96S21 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
RAB40CQ96S21 Y_RNA.370-201ENST00000365589 108 ntBASIC0.82□□□□□ -2.28
RAB40CQ96S21 SNORA51.10-201ENST00000384418 136 ntBASIC0.82□□□□□ -2.28
RAB40CQ96S21 MIR526A2-201ENST00000390198 65 ntBASIC0.82□□□□□ -2.28
RAB40CQ96S21 RNU2-64P-201ENST00000411315 191 ntBASIC0.82□□□□□ -2.28
RAB40CQ96S21 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.82□□□□□ -2.28
RAB40CQ96S21 RPL39P28-201ENST00000465655 155 ntBASIC0.82□□□□□ -2.28
RAB40CQ96S21 RNU7-25P-201ENST00000516544 62 ntBASIC0.82□□□□□ -2.28
RAB40CQ96S21 RNU11-2P-201ENST00000516898 142 ntBASIC0.82□□□□□ -2.28
RAB40CQ96S21 AP003072.1-201ENST00000531740 145 ntBASIC0.82□□□□□ -2.28
RAB40CQ96S21 AC006006.1-201ENST00000603082 144 ntBASIC0.82□□□□□ -2.28
RAB40CQ96S21 SNORD114-21-201ENST00000606412 72 ntBASIC0.82□□□□□ -2.28
RAB40CQ96S21 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.82□□□□□ -2.28
RAB40CQ96S21 RNU4-10P-201ENST00000364383 140 ntBASIC0.81□□□□□ -2.28
RAB40CQ96S21 Y_RNA.275-201ENST00000364726 110 ntBASIC0.81□□□□□ -2.28
RAB40CQ96S21 SNORA25.9-201ENST00000365087 128 ntBASIC0.81□□□□□ -2.28
RAB40CQ96S21 RNU6-1138P-201ENST00000365359 106 ntBASIC0.81□□□□□ -2.28
RAB40CQ96S21 Y_RNA.422-201ENST00000384054 114 ntBASIC0.81□□□□□ -2.28
RAB40CQ96S21 RNU6-1289P-201ENST00000384431 106 ntBASIC0.81□□□□□ -2.28
RAB40CQ96S21 Y_RNA.537-201ENST00000384626 109 ntBASIC0.81□□□□□ -2.28
RAB40CQ96S21 RNU6-1109P-201ENST00000391187 107 ntBASIC0.81□□□□□ -2.28
RAB40CQ96S21 MIR548O-201ENST00000408583 114 ntBASIC0.81□□□□□ -2.28
RAB40CQ96S21 AL392103.1-201ENST00000447000 198 ntBASIC0.81□□□□□ -2.28
RAB40CQ96S21 TRBVB-201ENST00000477100 408 ntBASIC0.81□□□□□ -2.28
RAB40CQ96S21 AC087343.1-201ENST00000477341 475 ntBASIC0.81□□□□□ -2.28
RAB40CQ96S21 SCARNA8-201ENST00000515924 131 ntBASIC0.81□□□□□ -2.28
RAB40CQ96S21 AC109810.1-201ENST00000534066 224 ntBASIC0.81□□□□□ -2.28
RAB40CQ96S21 AC131055.1-201ENST00000584626 316 ntBASIC0.81□□□□□ -2.28
RAB40CQ96S21 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.81□□□□□ -2.28
RAB40CQ96S21 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.81□□□□□ -2.28
RAB40CQ96S21 RNU6-211P-201ENST00000384047 107 ntBASIC0.8□□□□□ -2.28
RAB40CQ96S21 MIR1302-7-201ENST00000408841 72 ntBASIC0.8□□□□□ -2.28
RAB40CQ96S21 FABP5P4-201ENST00000437203 171 ntBASIC0.8□□□□□ -2.28
RAB40CQ96S21 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.8□□□□□ -2.28
RAB40CQ96S21 SNORD77.4-201ENST00000516158 81 ntBASIC0.8□□□□□ -2.28
RAB40CQ96S21 RNU6-635P-201ENST00000516651 102 ntBASIC0.8□□□□□ -2.28
RAB40CQ96S21 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.8□□□□□ -2.28
RAB40CQ96S21 MIR4662B-201ENST00000579498 81 ntBASIC0.8□□□□□ -2.28
RAB40CQ96S21 MIR4791-201ENST00000607666 84 ntBASIC0.8□□□□□ -2.28
RAB40CQ96S21 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
RAB40CQ96S21 Y_RNA.44-201ENST00000362676 108 ntBASIC0.79□□□□□ -2.28
RAB40CQ96S21 RNU4-38P-201ENST00000364472 129 ntBASIC0.79□□□□□ -2.28
RAB40CQ96S21 Y_RNA.547-201ENST00000384654 119 ntBASIC0.79□□□□□ -2.28
RAB40CQ96S21 SNORA8.3-201ENST00000384679 139 ntBASIC0.79□□□□□ -2.28
RAB40CQ96S21 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.79□□□□□ -2.28
RAB40CQ96S21 RNU6-847P-201ENST00000411115 108 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 185.6 ms