Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AC068700.1-201ENST00000565862 3754 ntBASIC1.24□□□□□ -2.21
NR1H4Q96RI1 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.24□□□□□ -2.21
NR1H4Q96RI1 AL442644.1-201ENST00000454390 3105 ntBASIC1.24□□□□□ -2.21
NR1H4Q96RI1 U8.17-201ENST00000391292 132 ntBASIC1.24□□□□□ -2.21
NR1H4Q96RI1 AL118496.2-201ENST00000448300 230 ntBASIC1.24□□□□□ -2.21
NR1H4Q96RI1 SNORD127-201ENST00000458892 86 ntBASIC1.24□□□□□ -2.21
NR1H4Q96RI1 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.24□□□□□ -2.21
NR1H4Q96RI1 SNORA31.24-201ENST00000517232 57 ntBASIC1.24□□□□□ -2.21
NR1H4Q96RI1 MIR3192-201ENST00000584920 77 ntBASIC1.24□□□□□ -2.21
NR1H4Q96RI1 AL391903.3-201ENST00000612158 163 ntBASIC1.24□□□□□ -2.21
NR1H4Q96RI1 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
NR1H4Q96RI1 Y_RNA.122-201ENST00000363331 96 ntBASIC1.23□□□□□ -2.21
NR1H4Q96RI1 Y_RNA.229-201ENST00000364347 113 ntBASIC1.23□□□□□ -2.21
NR1H4Q96RI1 SNORA80D-201ENST00000384488 135 ntBASIC1.23□□□□□ -2.21
NR1H4Q96RI1 MIR618-201ENST00000385287 98 ntBASIC1.23□□□□□ -2.21
NR1H4Q96RI1 SNORA26-201ENST00000391286 122 ntBASIC1.23□□□□□ -2.21
NR1H4Q96RI1 MIR548O-201ENST00000408583 114 ntBASIC1.23□□□□□ -2.21
NR1H4Q96RI1 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.23□□□□□ -2.21
NR1H4Q96RI1 SNORD13-201ENST00000459299 104 ntBASIC1.23□□□□□ -2.21
NR1H4Q96RI1 Y_RNA.638-201ENST00000459374 113 ntBASIC1.23□□□□□ -2.21
NR1H4Q96RI1 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.23□□□□□ -2.21
NR1H4Q96RI1 SCARNA8-201ENST00000515924 131 ntBASIC1.23□□□□□ -2.21
NR1H4Q96RI1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.23□□□□□ -2.21
NR1H4Q96RI1 AC015712.3-201ENST00000559380 164 ntBASIC1.23□□□□□ -2.21
NR1H4Q96RI1 AC099654.10-201ENST00000640395 161 ntBASIC1.23□□□□□ -2.21
NR1H4Q96RI1 RNA5SP99-201ENST00000364020 114 ntBASIC1.22□□□□□ -2.21
NR1H4Q96RI1 Y_RNA.277-201ENST00000364754 102 ntBASIC1.22□□□□□ -2.21
NR1H4Q96RI1 SNORD12-201ENST00000391002 90 ntBASIC1.22□□□□□ -2.21
NR1H4Q96RI1 AL591704.2-201ENST00000421658 181 ntBASIC1.22□□□□□ -2.21
NR1H4Q96RI1 MTND3P2-201ENST00000438452 342 ntBASIC1.22□□□□□ -2.21
NR1H4Q96RI1 RNU6-1132P-201ENST00000459214 107 ntBASIC1.22□□□□□ -2.21
NR1H4Q96RI1 AC107297.1-201ENST00000459991 176 ntBASIC1.22□□□□□ -2.21
NR1H4Q96RI1 RNU7-41P-201ENST00000515917 61 ntBASIC1.22□□□□□ -2.21
NR1H4Q96RI1 AC090821.2-201ENST00000523552 176 ntBASIC1.22□□□□□ -2.21
NR1H4Q96RI1 MIR3683-201ENST00000580847 82 ntBASIC1.22□□□□□ -2.21
NR1H4Q96RI1 MIR4282-201ENST00000583613 67 ntBASIC1.22□□□□□ -2.21
NR1H4Q96RI1 AL353997.5-201ENST00000618886 171 ntBASIC1.22□□□□□ -2.21
NR1H4Q96RI1 AC008133.2-201ENST00000624540 351 ntBASIC1.22□□□□□ -2.21
NR1H4Q96RI1 Y_RNA.262-201ENST00000364641 102 ntBASIC1.21□□□□□ -2.22
NR1H4Q96RI1 RNU6-60P-201ENST00000364792 103 ntBASIC1.21□□□□□ -2.22
NR1H4Q96RI1 Y_RNA.304-201ENST00000365011 112 ntBASIC1.21□□□□□ -2.22
NR1H4Q96RI1 Y_RNA.370-201ENST00000365589 108 ntBASIC1.21□□□□□ -2.22
NR1H4Q96RI1 RNY3P5-201ENST00000384127 102 ntBASIC1.21□□□□□ -2.22
NR1H4Q96RI1 RNU6-651P-201ENST00000411040 105 ntBASIC1.21□□□□□ -2.22
NR1H4Q96RI1 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.21□□□□□ -2.22
NR1H4Q96RI1 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.21□□□□□ -2.22
NR1H4Q96RI1 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.21□□□□□ -2.22
NR1H4Q96RI1 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.21□□□□□ -2.22
NR1H4Q96RI1 RNU6-365P-201ENST00000517113 106 ntBASIC1.21□□□□□ -2.22
NR1H4Q96RI1 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.21□□□□□ -2.22
NR1H4Q96RI1 MIR548AR-201ENST00000582191 57 ntBASIC1.21□□□□□ -2.22
NR1H4Q96RI1 MIR4769-201ENST00000584126 77 ntBASIC1.21□□□□□ -2.22
NR1H4Q96RI1 AL365265.1-201ENST00000621045 234 ntBASIC1.21□□□□□ -2.22
NR1H4Q96RI1 AC027335.2-201ENST00000624030 375 ntBASIC1.21□□□□□ -2.22
NR1H4Q96RI1 MIR4251-201ENST00000635819 61 ntBASIC1.21□□□□□ -2.22
NR1H4Q96RI1 MIR103A2-201ENST00000362154 78 ntBASIC1.2□□□□□ -2.22
NR1H4Q96RI1 RNA5SP264-201ENST00000363115 107 ntBASIC1.2□□□□□ -2.22
NR1H4Q96RI1 RNU4-17P-201ENST00000365598 141 ntBASIC1.2□□□□□ -2.22
NR1H4Q96RI1 Y_RNA.416-201ENST00000384014 113 ntBASIC1.2□□□□□ -2.22
NR1H4Q96RI1 RNU6-196P-201ENST00000384315 107 ntBASIC1.2□□□□□ -2.22
NR1H4Q96RI1 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.2□□□□□ -2.22
NR1H4Q96RI1 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.2□□□□□ -2.22
NR1H4Q96RI1 MIR1285-1-201ENST00000408593 84 ntBASIC1.2□□□□□ -2.22
NR1H4Q96RI1 RNU2-55P-201ENST00000411146 174 ntBASIC1.2□□□□□ -2.22
NR1H4Q96RI1 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.2□□□□□ -2.22
NR1H4Q96RI1 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.2□□□□□ -2.22
NR1H4Q96RI1 RNU6-1299P-201ENST00000516316 100 ntBASIC1.2□□□□□ -2.22
NR1H4Q96RI1 RNU7-25P-201ENST00000516544 62 ntBASIC1.2□□□□□ -2.22
NR1H4Q96RI1 RNU7-181P-201ENST00000517234 74 ntBASIC1.2□□□□□ -2.22
NR1H4Q96RI1 AL645939.4-201ENST00000604495 135 ntBASIC1.2□□□□□ -2.22
NR1H4Q96RI1 AL442067.1-201ENST00000613261 223 ntBASIC1.2□□□□□ -2.22
NR1H4Q96RI1 U4.1-201ENST00000620349 87 ntBASIC1.2□□□□□ -2.22
NR1H4Q96RI1 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
NR1H4Q96RI1 SNORA51.10-201ENST00000384418 136 ntBASIC1.19□□□□□ -2.22
NR1H4Q96RI1 Y_RNA.572-201ENST00000384757 98 ntBASIC1.19□□□□□ -2.22
NR1H4Q96RI1 SNORD28B-201ENST00000390993 75 ntBASIC1.19□□□□□ -2.22
NR1H4Q96RI1 RNU2-70P-201ENST00000410718 179 ntBASIC1.19□□□□□ -2.22
NR1H4Q96RI1 AC063976.4-201ENST00000421971 163 ntBASIC1.19□□□□□ -2.22
NR1H4Q96RI1 RPS29P28-201ENST00000446439 141 ntBASIC1.19□□□□□ -2.22
NR1H4Q96RI1 RPS29P29-201ENST00000456396 171 ntBASIC1.19□□□□□ -2.22
NR1H4Q96RI1 RNU4-57P-201ENST00000515980 135 ntBASIC1.19□□□□□ -2.22
NR1H4Q96RI1 SNORD79.1-201ENST00000516069 84 ntBASIC1.19□□□□□ -2.22
NR1H4Q96RI1 Y_RNA.666-201ENST00000516187 112 ntBASIC1.19□□□□□ -2.22
NR1H4Q96RI1 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.19□□□□□ -2.22
NR1H4Q96RI1 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.19□□□□□ -2.22
NR1H4Q96RI1 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
NR1H4Q96RI1 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
NR1H4Q96RI1 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
NR1H4Q96RI1 RNU1-17P-201ENST00000363022 152 ntBASIC1.18□□□□□ -2.22
NR1H4Q96RI1 SNORD27-201ENST00000363981 72 ntBASIC1.18□□□□□ -2.22
NR1H4Q96RI1 Y_RNA.199-201ENST00000364014 102 ntBASIC1.18□□□□□ -2.22
NR1H4Q96RI1 Y_RNA.350-201ENST00000365409 98 ntBASIC1.18□□□□□ -2.22
NR1H4Q96RI1 Y_RNA.486-201ENST00000384398 107 ntBASIC1.18□□□□□ -2.22
NR1H4Q96RI1 Y_RNA.537-201ENST00000384626 109 ntBASIC1.18□□□□□ -2.22
NR1H4Q96RI1 Y_RNA.547-201ENST00000384654 119 ntBASIC1.18□□□□□ -2.22
NR1H4Q96RI1 Y_RNA.562-201ENST00000384695 113 ntBASIC1.18□□□□□ -2.22
NR1H4Q96RI1 MIR568-201ENST00000385036 95 ntBASIC1.18□□□□□ -2.22
NR1H4Q96RI1 MIR616-201ENST00000385293 97 ntBASIC1.18□□□□□ -2.22
NR1H4Q96RI1 RNU6-847P-201ENST00000411115 108 ntBASIC1.18□□□□□ -2.22
NR1H4Q96RI1 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 212.2 ms