Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 Z69908.1-201ENST00000622603 247 ntBASIC-0.93□□□□□ -2.56
CCDC42Q96M95 MIR4788-201ENST00000639104 80 ntBASIC-0.93□□□□□ -2.56
CCDC42Q96M95 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.94□□□□□ -2.56
CCDC42Q96M95 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.94□□□□□ -2.56
CCDC42Q96M95 RNU6-291P-201ENST00000384720 107 ntBASIC-0.94□□□□□ -2.56
CCDC42Q96M95 RPL21P38-201ENST00000418090 167 ntBASIC-0.94□□□□□ -2.56
CCDC42Q96M95 USP9YP30-201ENST00000430729 455 ntBASIC-0.94□□□□□ -2.56
CCDC42Q96M95 AC109327.2-201ENST00000448339 378 ntBASIC-0.94□□□□□ -2.56
CCDC42Q96M95 AC138749.4-201ENST00000563970 127 ntBASIC-0.94□□□□□ -2.56
CCDC42Q96M95 AC060780.3-201ENST00000589464 80 ntBASIC-0.94□□□□□ -2.56
CCDC42Q96M95 AC245884.10-201ENST00000597355 337 ntBASIC-0.94□□□□□ -2.56
CCDC42Q96M95 AP003357.1-201ENST00000604497 148 ntBASIC-0.94□□□□□ -2.56
CCDC42Q96M95 AC068137.3-201ENST00000639191 341 ntBASIC-0.94□□□□□ -2.56
CCDC42Q96M95 RNU6-961P-201ENST00000363893 105 ntBASIC-0.95□□□□□ -2.56
CCDC42Q96M95 Y_RNA.450-201ENST00000384198 113 ntBASIC-0.95□□□□□ -2.56
CCDC42Q96M95 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-0.95□□□□□ -2.56
CCDC42Q96M95 RNU7-25P-201ENST00000516544 62 ntBASIC-0.95□□□□□ -2.56
CCDC42Q96M95 RNU7-53P-201ENST00000516705 60 ntBASIC-0.95□□□□□ -2.56
CCDC42Q96M95 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-0.95□□□□□ -2.56
CCDC42Q96M95 MIR2681-201ENST00000581814 105 ntBASIC-0.95□□□□□ -2.56
CCDC42Q96M95 MIR4677-201ENST00000584153 80 ntBASIC-0.95□□□□□ -2.56
CCDC42Q96M95 AC010205.1-201ENST00000616668 449 ntBASIC-0.95□□□□□ -2.56
CCDC42Q96M95 RNU6-1301P-201ENST00000362724 104 ntBASIC-0.96□□□□□ -2.56
CCDC42Q96M95 RNU6-1059P-201ENST00000363752 98 ntBASIC-0.96□□□□□ -2.56
CCDC42Q96M95 RNU6-842P-201ENST00000384269 107 ntBASIC-0.96□□□□□ -2.56
CCDC42Q96M95 MIR625-201ENST00000385047 85 ntBASIC-0.96□□□□□ -2.56
CCDC42Q96M95 RNU4-30P-201ENST00000410245 143 ntBASIC-0.96□□□□□ -2.56
CCDC42Q96M95 RNU6-284P-201ENST00000411105 106 ntBASIC-0.96□□□□□ -2.56
CCDC42Q96M95 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.96□□□□□ -2.56
CCDC42Q96M95 AC026782.1-201ENST00000512952 449 ntBASIC-0.96□□□□□ -2.56
CCDC42Q96M95 RNU6-475P-201ENST00000516073 104 ntBASIC-0.96□□□□□ -2.56
CCDC42Q96M95 AC024405.2-202ENST00000532731 184 ntBASIC-0.96□□□□□ -2.56
CCDC42Q96M95 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.96□□□□□ -2.56
CCDC42Q96M95 MIR378D2-201ENST00000580636 98 ntBASIC-0.96□□□□□ -2.56
CCDC42Q96M95 SNORA70.25-201ENST00000612741 95 ntBASIC-0.96□□□□□ -2.56
CCDC42Q96M95 RNU6-403P-201ENST00000363163 104 ntBASIC-0.97□□□□□ -2.56
CCDC42Q96M95 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.97□□□□□ -2.56
CCDC42Q96M95 RNU6-710P-201ENST00000410424 105 ntBASIC-0.97□□□□□ -2.56
CCDC42Q96M95 Y_RNA.615-201ENST00000410769 117 ntBASIC-0.97□□□□□ -2.56
CCDC42Q96M95 RNU6-1068P-201ENST00000410958 103 ntBASIC-0.97□□□□□ -2.56
CCDC42Q96M95 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.97□□□□□ -2.56
CCDC42Q96M95 RPL39P25-201ENST00000449384 154 ntBASIC-0.97□□□□□ -2.56
CCDC42Q96M95 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-0.97□□□□□ -2.56
CCDC42Q96M95 AC127455.1-201ENST00000565496 145 ntBASIC-0.97□□□□□ -2.56
CCDC42Q96M95 RNU6-535P-201ENST00000384722 107 ntBASIC-0.98□□□□□ -2.57
CCDC42Q96M95 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.98□□□□□ -2.57
CCDC42Q96M95 RNU6-966P-201ENST00000516479 104 ntBASIC-0.98□□□□□ -2.57
CCDC42Q96M95 Y_RNA.409-201ENST00000383990 98 ntBASIC-0.99□□□□□ -2.57
CCDC42Q96M95 RN7SKP142-201ENST00000411236 328 ntBASIC-0.99□□□□□ -2.57
CCDC42Q96M95 RPS29P8-201ENST00000445109 171 ntBASIC-0.99□□□□□ -2.57
CCDC42Q96M95 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-0.99□□□□□ -2.57
CCDC42Q96M95 MIR4802-201ENST00000581881 80 ntBASIC-0.99□□□□□ -2.57
CCDC42Q96M95 AC005014.2-201ENST00000607795 599 ntBASIC-0.99□□□□□ -2.57
CCDC42Q96M95 AC091931.1-201ENST00000623488 728 ntBASIC-0.99□□□□□ -2.57
CCDC42Q96M95 AL162376.1-201ENST00000624117 175 ntBASIC-0.99□□□□□ -2.57
CCDC42Q96M95 MIR101-1-201ENST00000362265 75 ntBASIC-1□□□□□ -2.57
CCDC42Q96M95 Y_RNA.310-201ENST00000365063 113 ntBASIC-1□□□□□ -2.57
CCDC42Q96M95 MTCO3P40-201ENST00000392516 676 ntBASIC-1□□□□□ -2.57
CCDC42Q96M95 MIR548O-201ENST00000408583 114 ntBASIC-1□□□□□ -2.57
CCDC42Q96M95 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-1□□□□□ -2.57
CCDC42Q96M95 AL445567.1-201ENST00000439121 144 ntBASIC-1□□□□□ -2.57
CCDC42Q96M95 SNORD5.1-201ENST00000458800 75 ntBASIC-1□□□□□ -2.57
CCDC42Q96M95 RNU2-11P-201ENST00000459191 187 ntBASIC-1□□□□□ -2.57
CCDC42Q96M95 RNU6-437P-201ENST00000459408 95 ntBASIC-1□□□□□ -2.57
CCDC42Q96M95 Y_RNA.666-201ENST00000516187 112 ntBASIC-1□□□□□ -2.57
CCDC42Q96M95 RNU6-155P-201ENST00000516347 100 ntBASIC-1□□□□□ -2.57
CCDC42Q96M95 AC087752.4-201ENST00000605911 462 ntBASIC-1□□□□□ -2.57
CCDC42Q96M95 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.01□□□□□ -2.57
CCDC42Q96M95 Y_RNA.146-201ENST00000363549 102 ntBASIC-1.01□□□□□ -2.57
CCDC42Q96M95 RNU6-726P-201ENST00000364680 107 ntBASIC-1.01□□□□□ -2.57
CCDC42Q96M95 Y_RNA.341-201ENST00000365341 102 ntBASIC-1.01□□□□□ -2.57
CCDC42Q96M95 Y_RNA.414-201ENST00000384011 101 ntBASIC-1.01□□□□□ -2.57
CCDC42Q96M95 Y_RNA.446-201ENST00000384178 104 ntBASIC-1.01□□□□□ -2.57
CCDC42Q96M95 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.01□□□□□ -2.57
CCDC42Q96M95 SNORA40.5-201ENST00000391061 128 ntBASIC-1.01□□□□□ -2.57
CCDC42Q96M95 RNA5SP451-201ENST00000410588 110 ntBASIC-1.01□□□□□ -2.57
CCDC42Q96M95 MTND3P3-201ENST00000505004 126 ntBASIC-1.01□□□□□ -2.57
CCDC42Q96M95 RNU7-115P-201ENST00000516433 55 ntBASIC-1.01□□□□□ -2.57
CCDC42Q96M95 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.01□□□□□ -2.57
CCDC42Q96M95 AP003072.1-201ENST00000531740 145 ntBASIC-1.01□□□□□ -2.57
CCDC42Q96M95 AC096720.1-201ENST00000604441 183 ntBASIC-1.01□□□□□ -2.57
CCDC42Q96M95 AL603755.1-201ENST00000619504 163 ntBASIC-1.01□□□□□ -2.57
CCDC42Q96M95 SNORA22B-201ENST00000383876 138 ntBASIC-1.02□□□□□ -2.57
CCDC42Q96M95 RNU6-708P-201ENST00000384217 107 ntBASIC-1.02□□□□□ -2.57
CCDC42Q96M95 Y_RNA.456-201ENST00000384232 111 ntBASIC-1.02□□□□□ -2.57
CCDC42Q96M95 MIR7-2-201ENST00000384970 110 ntBASIC-1.02□□□□□ -2.57
CCDC42Q96M95 MTND4P19-201ENST00000446659 478 ntBASIC-1.02□□□□□ -2.57
CCDC42Q96M95 SNORD11-201ENST00000459124 84 ntBASIC-1.02□□□□□ -2.57
CCDC42Q96M95 RN7SKP298-201ENST00000515950 94 ntBASIC-1.02□□□□□ -2.57
CCDC42Q96M95 MIR2355-201ENST00000517199 87 ntBASIC-1.02□□□□□ -2.57
CCDC42Q96M95 MTND5P34-201ENST00000568888 325 ntBASIC-1.02□□□□□ -2.57
CCDC42Q96M95 AC124312.5-201ENST00000604451 268 ntBASIC-1.02□□□□□ -2.57
CCDC42Q96M95 AC018462.2-201ENST00000605375 395 ntBASIC-1.02□□□□□ -2.57
CCDC42Q96M95 RNU6-811P-201ENST00000384069 107 ntBASIC-1.03□□□□□ -2.57
CCDC42Q96M95 SNORA75-201ENST00000384158 137 ntBASIC-1.03□□□□□ -2.57
CCDC42Q96M95 U8.15-201ENST00000390947 134 ntBASIC-1.03□□□□□ -2.57
CCDC42Q96M95 MIR876-201ENST00000401147 81 ntBASIC-1.03□□□□□ -2.57
CCDC42Q96M95 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.03□□□□□ -2.57
CCDC42Q96M95 RPL7P42-201ENST00000481005 679 ntBASIC-1.03□□□□□ -2.57
CCDC42Q96M95 AC114755.3-201ENST00000481111 251 ntBASIC-1.03□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 208.7 ms