Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 RNU7-141P-201ENST00000459304 62 ntBASIC0.25□□□□□ -2.37
PKNOX2Q96KN3 LARP7P1-201ENST00000605576 316 ntBASIC0.25□□□□□ -2.37
PKNOX2Q96KN3 AL162730.1-201ENST00000605734 292 ntBASIC0.25□□□□□ -2.37
PKNOX2Q96KN3 AC092794.1-201ENST00000612734 582 ntBASIC0.25□□□□□ -2.37
PKNOX2Q96KN3 RNU6-349P-201ENST00000362402 107 ntBASIC0.24□□□□□ -2.37
PKNOX2Q96KN3 Y_RNA.259-201ENST00000364619 101 ntBASIC0.24□□□□□ -2.37
PKNOX2Q96KN3 Y_RNA.393-201ENST00000383936 102 ntBASIC0.24□□□□□ -2.37
PKNOX2Q96KN3 SNORD63-201ENST00000384262 68 ntBASIC0.24□□□□□ -2.37
PKNOX2Q96KN3 Y_RNA.551-201ENST00000384661 102 ntBASIC0.24□□□□□ -2.37
PKNOX2Q96KN3 AC015818.7-201ENST00000428754 109 ntBASIC0.24□□□□□ -2.37
PKNOX2Q96KN3 AC087499.7-201ENST00000441958 109 ntBASIC0.24□□□□□ -2.37
PKNOX2Q96KN3 snoU13.16-201ENST00000459350 104 ntBASIC0.24□□□□□ -2.37
PKNOX2Q96KN3 RNA5SP480-201ENST00000516840 109 ntBASIC0.24□□□□□ -2.37
PKNOX2Q96KN3 SNORD116.3-201ENST00000517176 78 ntBASIC0.24□□□□□ -2.37
PKNOX2Q96KN3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.24□□□□□ -2.37
PKNOX2Q96KN3 MIR4676-201ENST00000583078 72 ntBASIC0.24□□□□□ -2.37
PKNOX2Q96KN3 AL121655.1-201ENST00000605811 308 ntBASIC0.24□□□□□ -2.37
PKNOX2Q96KN3 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.24□□□□□ -2.37
PKNOX2Q96KN3 MTND4LP32-201ENST00000636111 270 ntBASIC0.24□□□□□ -2.37
PKNOX2Q96KN3 Y_RNA.248-201ENST00000364501 109 ntBASIC0.23□□□□□ -2.37
PKNOX2Q96KN3 Y_RNA.387-201ENST00000383918 102 ntBASIC0.23□□□□□ -2.37
PKNOX2Q96KN3 SNORA24-201ENST00000384096 131 ntBASIC0.23□□□□□ -2.37
PKNOX2Q96KN3 SNORA72.4-201ENST00000384174 132 ntBASIC0.23□□□□□ -2.37
PKNOX2Q96KN3 Y_RNA.463-201ENST00000384271 102 ntBASIC0.23□□□□□ -2.37
PKNOX2Q96KN3 SNORD116-29-201ENST00000384516 83 ntBASIC0.23□□□□□ -2.37
PKNOX2Q96KN3 RNY4P36-201ENST00000391116 96 ntBASIC0.23□□□□□ -2.37
PKNOX2Q96KN3 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.23□□□□□ -2.37
PKNOX2Q96KN3 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.23□□□□□ -2.37
PKNOX2Q96KN3 RNU7-56P-201ENST00000458744 62 ntBASIC0.23□□□□□ -2.37
PKNOX2Q96KN3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.23□□□□□ -2.37
PKNOX2Q96KN3 AC005357.1-201ENST00000588399 301 ntBASIC0.23□□□□□ -2.37
PKNOX2Q96KN3 AC020891.4-201ENST00000605745 93 ntBASIC0.23□□□□□ -2.37
PKNOX2Q96KN3 U6atac.1-201ENST00000616025 117 ntBASIC0.23□□□□□ -2.37
PKNOX2Q96KN3 AC092634.7-201ENST00000621022 103 ntBASIC0.23□□□□□ -2.37
PKNOX2Q96KN3 AL589743.1-201ENST00000551932 2712 ntBASIC0.23□□□□□ -2.37
PKNOX2Q96KN3 RNU6-1048P-201ENST00000364054 107 ntBASIC0.22□□□□□ -2.37
PKNOX2Q96KN3 MIR193B-201ENST00000384907 83 ntBASIC0.22□□□□□ -2.37
PKNOX2Q96KN3 RNA5SP299-201ENST00000391203 116 ntBASIC0.22□□□□□ -2.37
PKNOX2Q96KN3 RNU4-30P-201ENST00000410245 143 ntBASIC0.22□□□□□ -2.37
PKNOX2Q96KN3 RNU2-14P-201ENST00000411053 191 ntBASIC0.22□□□□□ -2.37
PKNOX2Q96KN3 AC090844.1-201ENST00000422019 156 ntBASIC0.22□□□□□ -2.37
PKNOX2Q96KN3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.22□□□□□ -2.37
PKNOX2Q96KN3 AC107297.1-201ENST00000459991 176 ntBASIC0.22□□□□□ -2.37
PKNOX2Q96KN3 AC108740.1-201ENST00000498629 225 ntBASIC0.22□□□□□ -2.37
PKNOX2Q96KN3 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.21□□□□□ -2.38
PKNOX2Q96KN3 RNU6-801P-201ENST00000364087 105 ntBASIC0.21□□□□□ -2.38
PKNOX2Q96KN3 Y_RNA.547-201ENST00000384654 119 ntBASIC0.21□□□□□ -2.38
PKNOX2Q96KN3 RNU6-21P-201ENST00000384710 107 ntBASIC0.21□□□□□ -2.38
PKNOX2Q96KN3 RNU6-1248P-201ENST00000391096 64 ntBASIC0.21□□□□□ -2.38
PKNOX2Q96KN3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.21□□□□□ -2.38
PKNOX2Q96KN3 RNU7-62P-201ENST00000458856 62 ntBASIC0.21□□□□□ -2.38
PKNOX2Q96KN3 RNU7-25P-201ENST00000516544 62 ntBASIC0.21□□□□□ -2.38
PKNOX2Q96KN3 Y_RNA.718-201ENST00000517110 102 ntBASIC0.21□□□□□ -2.38
PKNOX2Q96KN3 RPS29P30-201ENST00000600975 111 ntBASIC0.21□□□□□ -2.38
PKNOX2Q96KN3 AL355297.3-201ENST00000604082 446 ntBASIC0.21□□□□□ -2.38
PKNOX2Q96KN3 AL138825.1-201ENST00000618587 192 ntBASIC0.21□□□□□ -2.38
PKNOX2Q96KN3 AC010487.4-201ENST00000637027 61 ntBASIC0.21□□□□□ -2.38
PKNOX2Q96KN3 SNORA63C-201ENST00000364578 129 ntBASIC0.2□□□□□ -2.38
PKNOX2Q96KN3 Y_RNA.383-201ENST00000383855 97 ntBASIC0.2□□□□□ -2.38
PKNOX2Q96KN3 Y_RNA.439-201ENST00000384119 94 ntBASIC0.2□□□□□ -2.38
PKNOX2Q96KN3 RNU6-937P-201ENST00000384325 106 ntBASIC0.2□□□□□ -2.38
PKNOX2Q96KN3 RNA5SP193-201ENST00000410353 107 ntBASIC0.2□□□□□ -2.38
PKNOX2Q96KN3 BTF3P11-201ENST00000426582 477 ntBASIC0.2□□□□□ -2.38
PKNOX2Q96KN3 AC010655.3-201ENST00000478818 450 ntBASIC0.2□□□□□ -2.38
PKNOX2Q96KN3 AC091959.1-201ENST00000495857 238 ntBASIC0.2□□□□□ -2.38
PKNOX2Q96KN3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
PKNOX2Q96KN3 Y_RNA.39-201ENST00000362620 98 ntBASIC0.19□□□□□ -2.38
PKNOX2Q96KN3 RNU4-80P-201ENST00000363200 141 ntBASIC0.19□□□□□ -2.38
PKNOX2Q96KN3 Y_RNA.496-201ENST00000384444 101 ntBASIC0.19□□□□□ -2.38
PKNOX2Q96KN3 SNORA26.5-201ENST00000391215 123 ntBASIC0.19□□□□□ -2.38
PKNOX2Q96KN3 MIR938-201ENST00000401216 83 ntBASIC0.19□□□□□ -2.38
PKNOX2Q96KN3 MIR548O-201ENST00000408583 114 ntBASIC0.19□□□□□ -2.38
PKNOX2Q96KN3 AC098614.3-201ENST00000438957 440 ntBASIC0.19□□□□□ -2.38
PKNOX2Q96KN3 RNU6-277P-201ENST00000516272 106 ntBASIC0.19□□□□□ -2.38
PKNOX2Q96KN3 SNORA40.14-201ENST00000516543 86 ntBASIC0.19□□□□□ -2.38
PKNOX2Q96KN3 Y_RNA.713-201ENST00000517013 96 ntBASIC0.19□□□□□ -2.38
PKNOX2Q96KN3 AC092447.9-201ENST00000603395 144 ntBASIC0.19□□□□□ -2.38
PKNOX2Q96KN3 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.19□□□□□ -2.38
PKNOX2Q96KN3 AC134878.1-201ENST00000619901 243 ntBASIC0.19□□□□□ -2.38
PKNOX2Q96KN3 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.19□□□□□ -2.38
PKNOX2Q96KN3 AC022140.2-201ENST00000623500 188 ntBASIC0.19□□□□□ -2.38
PKNOX2Q96KN3 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
PKNOX2Q96KN3 SNORD115-34-201ENST00000362441 82 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 SNORD115-12-201ENST00000362583 82 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 SNORD115-29-201ENST00000362834 82 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 SNORD115-9-201ENST00000362912 82 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 SNORD115-21-201ENST00000362963 81 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 SNORD115-14-201ENST00000363090 81 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 SNORD115-13-201ENST00000363358 82 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 SNORD115-41-201ENST00000363608 82 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 SNORD115-11-201ENST00000363616 82 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 SNORD115-5-201ENST00000363633 82 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 SNORD115-39-201ENST00000363694 82 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 SNORD115-4-201ENST00000363810 82 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 SNORD115-16-201ENST00000363887 82 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 SNORD115-6-201ENST00000363942 82 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 SNORD115-42-201ENST00000364273 82 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 SNORD115-15-201ENST00000364809 81 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 SNORD115-1-201ENST00000364961 82 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 SNORD115-26-201ENST00000365067 82 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 181.3 ms