Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 Y_RNA.75-201ENST00000362927 97 ntBASIC1.88□□□□□ -2.11
CDK5RAP3Q96JB5 RNU6-457P-201ENST00000363999 107 ntBASIC1.88□□□□□ -2.11
CDK5RAP3Q96JB5 SNORD48-201ENST00000364953 64 ntBASIC1.88□□□□□ -2.11
CDK5RAP3Q96JB5 RNU2-70P-201ENST00000410718 179 ntBASIC1.88□□□□□ -2.11
CDK5RAP3Q96JB5 RNU1-98P-201ENST00000458992 160 ntBASIC1.88□□□□□ -2.11
CDK5RAP3Q96JB5 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CDK5RAP3Q96JB5 RNU6-199P-201ENST00000362954 107 ntBASIC1.87□□□□□ -2.11
CDK5RAP3Q96JB5 RNU6-484P-201ENST00000384016 107 ntBASIC1.87□□□□□ -2.11
CDK5RAP3Q96JB5 MIR452-201ENST00000385020 85 ntBASIC1.87□□□□□ -2.11
CDK5RAP3Q96JB5 SNORA26.9-201ENST00000391322 122 ntBASIC1.87□□□□□ -2.11
CDK5RAP3Q96JB5 AL627390.1-201ENST00000396055 340 ntBASIC1.87□□□□□ -2.11
CDK5RAP3Q96JB5 SNORA11.2-201ENST00000408318 127 ntBASIC1.87□□□□□ -2.11
CDK5RAP3Q96JB5 SNORA79-201ENST00000408376 140 ntBASIC1.87□□□□□ -2.11
CDK5RAP3Q96JB5 RNU2-64P-201ENST00000411315 191 ntBASIC1.87□□□□□ -2.11
CDK5RAP3Q96JB5 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.87□□□□□ -2.11
CDK5RAP3Q96JB5 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.87□□□□□ -2.11
CDK5RAP3Q96JB5 RNU6-126P-201ENST00000516685 103 ntBASIC1.87□□□□□ -2.11
CDK5RAP3Q96JB5 MRPS18CP4-201ENST00000535821 231 ntBASIC1.87□□□□□ -2.11
CDK5RAP3Q96JB5 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.87□□□□□ -2.11
CDK5RAP3Q96JB5 RNU6-682P-201ENST00000363843 106 ntBASIC1.86□□□□□ -2.11
CDK5RAP3Q96JB5 RNU6-268P-201ENST00000364174 107 ntBASIC1.86□□□□□ -2.11
CDK5RAP3Q96JB5 MIR504-201ENST00000385065 83 ntBASIC1.86□□□□□ -2.11
CDK5RAP3Q96JB5 AC015688.6-201ENST00000577737 104 ntBASIC1.86□□□□□ -2.11
CDK5RAP3Q96JB5 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CDK5RAP3Q96JB5 Y_RNA.91-201ENST00000363042 107 ntBASIC1.85□□□□□ -2.11
CDK5RAP3Q96JB5 SNORD38C-201ENST00000384381 69 ntBASIC1.85□□□□□ -2.11
CDK5RAP3Q96JB5 RNU6-997P-201ENST00000384725 107 ntBASIC1.85□□□□□ -2.11
CDK5RAP3Q96JB5 MIR516B2-201ENST00000385190 85 ntBASIC1.85□□□□□ -2.11
CDK5RAP3Q96JB5 SNORA26-201ENST00000391286 122 ntBASIC1.85□□□□□ -2.11
CDK5RAP3Q96JB5 SNRPGP14-201ENST00000435400 219 ntBASIC1.85□□□□□ -2.11
CDK5RAP3Q96JB5 AC015922.2-201ENST00000435593 184 ntBASIC1.85□□□□□ -2.11
CDK5RAP3Q96JB5 Y_RNA.662-201ENST00000516028 97 ntBASIC1.85□□□□□ -2.11
CDK5RAP3Q96JB5 Y_RNA.666-201ENST00000516187 112 ntBASIC1.85□□□□□ -2.11
CDK5RAP3Q96JB5 RNU6-365P-201ENST00000517113 106 ntBASIC1.85□□□□□ -2.11
CDK5RAP3Q96JB5 MIR4422-201ENST00000581938 83 ntBASIC1.85□□□□□ -2.11
CDK5RAP3Q96JB5 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.85□□□□□ -2.11
CDK5RAP3Q96JB5 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
CDK5RAP3Q96JB5 Y_RNA.270-201ENST00000364693 104 ntBASIC1.84□□□□□ -2.11
CDK5RAP3Q96JB5 Y_RNA.634-201ENST00000364811 113 ntBASIC1.84□□□□□ -2.11
CDK5RAP3Q96JB5 MIR526A1-201ENST00000384897 85 ntBASIC1.84□□□□□ -2.11
CDK5RAP3Q96JB5 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.84□□□□□ -2.11
CDK5RAP3Q96JB5 RNA5SP153-201ENST00000516498 76 ntBASIC1.84□□□□□ -2.11
CDK5RAP3Q96JB5 RNU6-197P-201ENST00000516680 100 ntBASIC1.84□□□□□ -2.11
CDK5RAP3Q96JB5 AC090142.3-201ENST00000519012 385 ntBASIC1.84□□□□□ -2.11
CDK5RAP3Q96JB5 AC006441.5-201ENST00000612680 209 ntBASIC1.84□□□□□ -2.11
CDK5RAP3Q96JB5 Y_RNA.23-201ENST00000362496 106 ntBASIC1.83□□□□□ -2.12
CDK5RAP3Q96JB5 Y_RNA.240-201ENST00000364469 95 ntBASIC1.83□□□□□ -2.12
CDK5RAP3Q96JB5 RNU6-312P-201ENST00000364629 107 ntBASIC1.83□□□□□ -2.12
CDK5RAP3Q96JB5 RNU4-43P-201ENST00000410628 137 ntBASIC1.83□□□□□ -2.12
CDK5RAP3Q96JB5 AC092991.1-201ENST00000477176 376 ntBASIC1.83□□□□□ -2.12
CDK5RAP3Q96JB5 FAM106DP-201ENST00000586416 501 ntBASIC1.83□□□□□ -2.12
CDK5RAP3Q96JB5 AC098479.1-201ENST00000609225 154 ntBASIC1.83□□□□□ -2.12
CDK5RAP3Q96JB5 FTX_2.1-201ENST00000618816 94 ntBASIC1.83□□□□□ -2.12
CDK5RAP3Q96JB5 Y_RNA.150-201ENST00000363562 102 ntBASIC1.82□□□□□ -2.12
CDK5RAP3Q96JB5 RNU6-643P-201ENST00000384018 107 ntBASIC1.82□□□□□ -2.12
CDK5RAP3Q96JB5 MIR136-201ENST00000385207 82 ntBASIC1.82□□□□□ -2.12
CDK5RAP3Q96JB5 RNU1-78P-201ENST00000391248 165 ntBASIC1.82□□□□□ -2.12
CDK5RAP3Q96JB5 AC006461.1-201ENST00000412637 326 ntBASIC1.82□□□□□ -2.12
CDK5RAP3Q96JB5 SEPT7P4-201ENST00000437076 306 ntBASIC1.82□□□□□ -2.12
CDK5RAP3Q96JB5 SNRPGP13-201ENST00000442212 177 ntBASIC1.82□□□□□ -2.12
CDK5RAP3Q96JB5 RNU6-917P-201ENST00000516294 104 ntBASIC1.82□□□□□ -2.12
CDK5RAP3Q96JB5 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CDK5RAP3Q96JB5 AL160236.1-201ENST00000556317 195 ntBASIC1.82□□□□□ -2.12
CDK5RAP3Q96JB5 MIR4431-201ENST00000579990 94 ntBASIC1.82□□□□□ -2.12
CDK5RAP3Q96JB5 AC015726.2-201ENST00000620112 122 ntBASIC1.82□□□□□ -2.12
CDK5RAP3Q96JB5 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
CDK5RAP3Q96JB5 SNORD1A-201ENST00000364968 72 ntBASIC1.81□□□□□ -2.12
CDK5RAP3Q96JB5 SNORA2.2-201ENST00000365473 135 ntBASIC1.81□□□□□ -2.12
CDK5RAP3Q96JB5 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.81□□□□□ -2.12
CDK5RAP3Q96JB5 MIR548O-201ENST00000408583 114 ntBASIC1.81□□□□□ -2.12
CDK5RAP3Q96JB5 AC074198.2-201ENST00000508153 258 ntBASIC1.81□□□□□ -2.12
CDK5RAP3Q96JB5 RNU7-25P-201ENST00000516544 62 ntBASIC1.81□□□□□ -2.12
CDK5RAP3Q96JB5 RNU6-504P-201ENST00000516568 104 ntBASIC1.81□□□□□ -2.12
CDK5RAP3Q96JB5 RNU6-548P-201ENST00000517083 115 ntBASIC1.81□□□□□ -2.12
CDK5RAP3Q96JB5 RNU6-1270P-201ENST00000517128 108 ntBASIC1.81□□□□□ -2.12
CDK5RAP3Q96JB5 AL365434.2-201ENST00000607979 234 ntBASIC1.81□□□□□ -2.12
CDK5RAP3Q96JB5 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
CDK5RAP3Q96JB5 MIR302D-201ENST00000362275 68 ntBASIC1.8□□□□□ -2.12
CDK5RAP3Q96JB5 RNA5SP363-201ENST00000365072 115 ntBASIC1.8□□□□□ -2.12
CDK5RAP3Q96JB5 Y_RNA.357-201ENST00000365487 109 ntBASIC1.8□□□□□ -2.12
CDK5RAP3Q96JB5 SNORD61-201ENST00000384252 73 ntBASIC1.8□□□□□ -2.12
CDK5RAP3Q96JB5 CYCSP49-201ENST00000420810 319 ntBASIC1.8□□□□□ -2.12
CDK5RAP3Q96JB5 AC079140.2-201ENST00000506193 142 ntBASIC1.8□□□□□ -2.12
CDK5RAP3Q96JB5 RNU6-693P-201ENST00000516134 107 ntBASIC1.8□□□□□ -2.12
CDK5RAP3Q96JB5 AC019176.1-201ENST00000518519 225 ntBASIC1.8□□□□□ -2.12
CDK5RAP3Q96JB5 AP001485.1-201ENST00000604799 199 ntBASIC1.8□□□□□ -2.12
CDK5RAP3Q96JB5 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.79□□□□□ -2.12
CDK5RAP3Q96JB5 WWP1P1-201ENST00000466609 2769 ntBASIC1.79□□□□□ -2.12
CDK5RAP3Q96JB5 Y_RNA.66-201ENST00000362862 102 ntBASIC1.79□□□□□ -2.12
CDK5RAP3Q96JB5 RNA5SP190-201ENST00000365222 118 ntBASIC1.79□□□□□ -2.12
CDK5RAP3Q96JB5 SNORD24-201ENST00000383884 75 ntBASIC1.79□□□□□ -2.12
CDK5RAP3Q96JB5 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.79□□□□□ -2.12
CDK5RAP3Q96JB5 RNA5SP445-201ENST00000515889 115 ntBASIC1.79□□□□□ -2.12
CDK5RAP3Q96JB5 RNU6-322P-201ENST00000516010 103 ntBASIC1.79□□□□□ -2.12
CDK5RAP3Q96JB5 AC090049.2-201ENST00000550377 109 ntBASIC1.79□□□□□ -2.12
CDK5RAP3Q96JB5 MIR4255-201ENST00000579351 72 ntBASIC1.79□□□□□ -2.12
CDK5RAP3Q96JB5 MIR378D2-201ENST00000580636 98 ntBASIC1.79□□□□□ -2.12
CDK5RAP3Q96JB5 MIR3683-201ENST00000580847 82 ntBASIC1.79□□□□□ -2.12
CDK5RAP3Q96JB5 AC097639.2-201ENST00000603159 172 ntBASIC1.79□□□□□ -2.12
CDK5RAP3Q96JB5 Y_RNA.547-201ENST00000384654 119 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 325.2 ms