Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 RNU7-200P-201ENST00000516105 62 ntBASIC1.79□□□□□ -2.12
CTHRC1Q96CG8 RNU6-693P-201ENST00000516134 107 ntBASIC1.79□□□□□ -2.12
CTHRC1Q96CG8 Y_RNA.666-201ENST00000516187 112 ntBASIC1.79□□□□□ -2.12
CTHRC1Q96CG8 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CTHRC1Q96CG8 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.79□□□□□ -2.12
CTHRC1Q96CG8 AC022254.1-201ENST00000567857 235 ntBASIC1.79□□□□□ -2.12
CTHRC1Q96CG8 SNRPGP19-201ENST00000603826 189 ntBASIC1.79□□□□□ -2.12
CTHRC1Q96CG8 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.79□□□□□ -2.12
CTHRC1Q96CG8 Y_RNA.778-201ENST00000620203 90 ntBASIC1.79□□□□□ -2.12
CTHRC1Q96CG8 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.79□□□□□ -2.12
CTHRC1Q96CG8 MIR424-201ENST00000362227 98 ntBASIC1.78□□□□□ -2.12
CTHRC1Q96CG8 RNU6-661P-201ENST00000362409 107 ntBASIC1.78□□□□□ -2.12
CTHRC1Q96CG8 RNU6-268P-201ENST00000364174 107 ntBASIC1.78□□□□□ -2.12
CTHRC1Q96CG8 RNY1P5-201ENST00000383890 115 ntBASIC1.78□□□□□ -2.12
CTHRC1Q96CG8 Y_RNA.400-201ENST00000383963 111 ntBASIC1.78□□□□□ -2.12
CTHRC1Q96CG8 Y_RNA.506-201ENST00000384494 102 ntBASIC1.78□□□□□ -2.12
CTHRC1Q96CG8 U8.13-201ENST00000390842 128 ntBASIC1.78□□□□□ -2.12
CTHRC1Q96CG8 SUMO1P3-201ENST00000439961 304 ntBASIC1.78□□□□□ -2.12
CTHRC1Q96CG8 AC099513.1-201ENST00000490423 301 ntBASIC1.78□□□□□ -2.12
CTHRC1Q96CG8 MTND5P41-201ENST00000517498 206 ntBASIC1.78□□□□□ -2.12
CTHRC1Q96CG8 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.78□□□□□ -2.12
CTHRC1Q96CG8 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.77□□□□□ -2.13
CTHRC1Q96CG8 RNU6-1123P-201ENST00000362347 106 ntBASIC1.77□□□□□ -2.13
CTHRC1Q96CG8 Y_RNA.66-201ENST00000362862 102 ntBASIC1.77□□□□□ -2.13
CTHRC1Q96CG8 RNU6-888P-201ENST00000363010 101 ntBASIC1.77□□□□□ -2.13
CTHRC1Q96CG8 RNU6-978P-201ENST00000364371 103 ntBASIC1.77□□□□□ -2.13
CTHRC1Q96CG8 SNORD61-201ENST00000384252 73 ntBASIC1.77□□□□□ -2.13
CTHRC1Q96CG8 RNU6-768P-201ENST00000384683 107 ntBASIC1.77□□□□□ -2.13
CTHRC1Q96CG8 MIR452-201ENST00000385020 85 ntBASIC1.77□□□□□ -2.13
CTHRC1Q96CG8 AC015922.2-201ENST00000435593 184 ntBASIC1.77□□□□□ -2.13
CTHRC1Q96CG8 RNA5SP182-201ENST00000516064 82 ntBASIC1.77□□□□□ -2.13
CTHRC1Q96CG8 Y_RNA.703-201ENST00000516846 111 ntBASIC1.77□□□□□ -2.13
CTHRC1Q96CG8 AL627230.6-201ENST00000611129 280 ntBASIC1.77□□□□□ -2.13
CTHRC1Q96CG8 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.77□□□□□ -2.13
CTHRC1Q96CG8 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CTHRC1Q96CG8 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.76□□□□□ -2.13
CTHRC1Q96CG8 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CTHRC1Q96CG8 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
CTHRC1Q96CG8 SNORA75.5-201ENST00000391291 81 ntBASIC1.76□□□□□ -2.13
CTHRC1Q96CG8 MIR513C-201ENST00000401352 84 ntBASIC1.76□□□□□ -2.13
CTHRC1Q96CG8 AC004965.1-201ENST00000413033 213 ntBASIC1.76□□□□□ -2.13
CTHRC1Q96CG8 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.76□□□□□ -2.13
CTHRC1Q96CG8 JTBP1-201ENST00000441314 247 ntBASIC1.76□□□□□ -2.13
CTHRC1Q96CG8 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.76□□□□□ -2.13
CTHRC1Q96CG8 SNORA18.4-201ENST00000516440 124 ntBASIC1.76□□□□□ -2.13
CTHRC1Q96CG8 MIR3133-201ENST00000583157 78 ntBASIC1.76□□□□□ -2.13
CTHRC1Q96CG8 MIR3935-201ENST00000583472 104 ntBASIC1.76□□□□□ -2.13
CTHRC1Q96CG8 RNU6-774P-201ENST00000363238 107 ntBASIC1.75□□□□□ -2.13
CTHRC1Q96CG8 Y_RNA.343-201ENST00000365354 112 ntBASIC1.75□□□□□ -2.13
CTHRC1Q96CG8 Y_RNA.488-201ENST00000384403 102 ntBASIC1.75□□□□□ -2.13
CTHRC1Q96CG8 Y_RNA.542-201ENST00000384641 111 ntBASIC1.75□□□□□ -2.13
CTHRC1Q96CG8 AC019129.1-201ENST00000403786 261 ntBASIC1.75□□□□□ -2.13
CTHRC1Q96CG8 SUMO2P12-201ENST00000405924 140 ntBASIC1.75□□□□□ -2.13
CTHRC1Q96CG8 MIR548O-201ENST00000408583 114 ntBASIC1.75□□□□□ -2.13
CTHRC1Q96CG8 MIR1267-201ENST00000408723 78 ntBASIC1.75□□□□□ -2.13
CTHRC1Q96CG8 SNRPGP14-201ENST00000435400 219 ntBASIC1.75□□□□□ -2.13
CTHRC1Q96CG8 AC093850.1-201ENST00000454121 251 ntBASIC1.75□□□□□ -2.13
CTHRC1Q96CG8 RNU6-1270P-201ENST00000517128 108 ntBASIC1.75□□□□□ -2.13
CTHRC1Q96CG8 AC090142.3-201ENST00000519012 385 ntBASIC1.75□□□□□ -2.13
CTHRC1Q96CG8 MIR4778-201ENST00000577635 80 ntBASIC1.75□□□□□ -2.13
CTHRC1Q96CG8 MIR548X2-201ENST00000579776 100 ntBASIC1.75□□□□□ -2.13
CTHRC1Q96CG8 MIR8074-201ENST00000615081 81 ntBASIC1.75□□□□□ -2.13
CTHRC1Q96CG8 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.75□□□□□ -2.13
CTHRC1Q96CG8 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CTHRC1Q96CG8 Y_RNA.215-201ENST00000364204 112 ntBASIC1.74□□□□□ -2.13
CTHRC1Q96CG8 RNU4-11P-201ENST00000365287 132 ntBASIC1.74□□□□□ -2.13
CTHRC1Q96CG8 RNU6-203P-201ENST00000384038 104 ntBASIC1.74□□□□□ -2.13
CTHRC1Q96CG8 RNU6-125P-201ENST00000384505 107 ntBASIC1.74□□□□□ -2.13
CTHRC1Q96CG8 MIR136-201ENST00000385207 82 ntBASIC1.74□□□□□ -2.13
CTHRC1Q96CG8 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
CTHRC1Q96CG8 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
CTHRC1Q96CG8 MIR676-201ENST00000390702 67 ntBASIC1.74□□□□□ -2.13
CTHRC1Q96CG8 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.74□□□□□ -2.13
CTHRC1Q96CG8 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.74□□□□□ -2.13
CTHRC1Q96CG8 snoU13.23-201ENST00000458863 104 ntBASIC1.74□□□□□ -2.13
CTHRC1Q96CG8 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.74□□□□□ -2.13
CTHRC1Q96CG8 RNA5SP364-201ENST00000516938 78 ntBASIC1.74□□□□□ -2.13
CTHRC1Q96CG8 SNORA44.1-201ENST00000517031 108 ntBASIC1.74□□□□□ -2.13
CTHRC1Q96CG8 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.74□□□□□ -2.13
CTHRC1Q96CG8 AC112693.2-201ENST00000556538 232 ntBASIC1.74□□□□□ -2.13
CTHRC1Q96CG8 AC012493.3-201ENST00000604494 112 ntBASIC1.74□□□□□ -2.13
CTHRC1Q96CG8 AC134878.1-201ENST00000619901 243 ntBASIC1.74□□□□□ -2.13
CTHRC1Q96CG8 MIR3658-201ENST00000636291 56 ntBASIC1.74□□□□□ -2.13
CTHRC1Q96CG8 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
CTHRC1Q96CG8 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CTHRC1Q96CG8 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CTHRC1Q96CG8 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
CTHRC1Q96CG8 SNORD115-28-201ENST00000363931 81 ntBASIC1.73□□□□□ -2.13
CTHRC1Q96CG8 MIR764-201ENST00000390811 85 ntBASIC1.73□□□□□ -2.13
CTHRC1Q96CG8 RNU6-588P-201ENST00000410281 105 ntBASIC1.73□□□□□ -2.13
CTHRC1Q96CG8 AL591806.2-201ENST00000433122 173 ntBASIC1.73□□□□□ -2.13
CTHRC1Q96CG8 RPL23AP42-201ENST00000471152 471 ntBASIC1.73□□□□□ -2.13
CTHRC1Q96CG8 RNU7-25P-201ENST00000516544 62 ntBASIC1.73□□□□□ -2.13
CTHRC1Q96CG8 SUMO2P16-201ENST00000519475 264 ntBASIC1.73□□□□□ -2.13
CTHRC1Q96CG8 DEFB122-202ENST00000569013 197 ntBASIC1.73□□□□□ -2.13
CTHRC1Q96CG8 AL365205.2-201ENST00000594586 68 ntBASIC1.73□□□□□ -2.13
CTHRC1Q96CG8 AL096840.1-201ENST00000603287 93 ntBASIC1.73□□□□□ -2.13
CTHRC1Q96CG8 AC015726.2-201ENST00000620112 122 ntBASIC1.73□□□□□ -2.13
CTHRC1Q96CG8 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CTHRC1Q96CG8 RNU6-818P-201ENST00000364837 108 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 208.6 ms