Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 RNY3P5-201ENST00000384127 102 ntBASIC1.89□□□□□ -2.11
CHMP4CQ96CF2 AL451046.2-201ENST00000403074 277 ntBASIC1.89□□□□□ -2.11
CHMP4CQ96CF2 AC027119.1-201ENST00000440877 241 ntBASIC1.89□□□□□ -2.11
CHMP4CQ96CF2 RNA5SP445-201ENST00000515889 115 ntBASIC1.89□□□□□ -2.11
CHMP4CQ96CF2 SNORD77.4-201ENST00000516158 81 ntBASIC1.89□□□□□ -2.11
CHMP4CQ96CF2 RNY3P16-201ENST00000516338 101 ntBASIC1.89□□□□□ -2.11
CHMP4CQ96CF2 RNU6-126P-201ENST00000516685 103 ntBASIC1.89□□□□□ -2.11
CHMP4CQ96CF2 AC090049.2-201ENST00000550377 109 ntBASIC1.89□□□□□ -2.11
CHMP4CQ96CF2 MIR4285-201ENST00000581001 85 ntBASIC1.89□□□□□ -2.11
CHMP4CQ96CF2 FAM106DP-201ENST00000586416 501 ntBASIC1.89□□□□□ -2.11
CHMP4CQ96CF2 AC009779.6-201ENST00000603972 165 ntBASIC1.89□□□□□ -2.11
CHMP4CQ96CF2 Pinc.1-201ENST00000616452 154 ntBASIC1.89□□□□□ -2.11
CHMP4CQ96CF2 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.89□□□□□ -2.11
CHMP4CQ96CF2 RNU6-1138P-201ENST00000365359 106 ntBASIC1.88□□□□□ -2.11
CHMP4CQ96CF2 RNU6-997P-201ENST00000384725 107 ntBASIC1.88□□□□□ -2.11
CHMP4CQ96CF2 MIR15B-201ENST00000385045 98 ntBASIC1.88□□□□□ -2.11
CHMP4CQ96CF2 MIR516B2-201ENST00000385190 85 ntBASIC1.88□□□□□ -2.11
CHMP4CQ96CF2 MIR136-201ENST00000385207 82 ntBASIC1.88□□□□□ -2.11
CHMP4CQ96CF2 AC245517.4-201ENST00000448601 281 ntBASIC1.88□□□□□ -2.11
CHMP4CQ96CF2 RNU6-917P-201ENST00000516294 104 ntBASIC1.88□□□□□ -2.11
CHMP4CQ96CF2 RNU6-922P-201ENST00000516753 99 ntBASIC1.88□□□□□ -2.11
CHMP4CQ96CF2 AL513534.2-201ENST00000603836 250 ntBASIC1.88□□□□□ -2.11
CHMP4CQ96CF2 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CHMP4CQ96CF2 AC078938.1-201ENST00000620993 318 ntBASIC1.88□□□□□ -2.11
CHMP4CQ96CF2 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.87□□□□□ -2.11
CHMP4CQ96CF2 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CHMP4CQ96CF2 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.87□□□□□ -2.11
CHMP4CQ96CF2 MIR526A1-201ENST00000384897 85 ntBASIC1.87□□□□□ -2.11
CHMP4CQ96CF2 MT-TT-201ENST00000387460 66 ntBASIC1.87□□□□□ -2.11
CHMP4CQ96CF2 AL606845.1-201ENST00000404881 255 ntBASIC1.87□□□□□ -2.11
CHMP4CQ96CF2 AC015922.2-201ENST00000435593 184 ntBASIC1.87□□□□□ -2.11
CHMP4CQ96CF2 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CHMP4CQ96CF2 MIR411-201ENST00000362239 96 ntBASIC1.86□□□□□ -2.11
CHMP4CQ96CF2 MIR653-201ENST00000385279 96 ntBASIC1.86□□□□□ -2.11
CHMP4CQ96CF2 RNU6-1228P-201ENST00000391014 107 ntBASIC1.86□□□□□ -2.11
CHMP4CQ96CF2 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.86□□□□□ -2.11
CHMP4CQ96CF2 RNU6-453P-201ENST00000516819 85 ntBASIC1.86□□□□□ -2.11
CHMP4CQ96CF2 AC090142.3-201ENST00000519012 385 ntBASIC1.86□□□□□ -2.11
CHMP4CQ96CF2 MIR378A-201ENST00000362177 66 ntBASIC1.85□□□□□ -2.11
CHMP4CQ96CF2 Y_RNA.7-201ENST00000362352 102 ntBASIC1.85□□□□□ -2.11
CHMP4CQ96CF2 Y_RNA.164-201ENST00000363709 102 ntBASIC1.85□□□□□ -2.11
CHMP4CQ96CF2 MIR517C-201ENST00000385103 95 ntBASIC1.85□□□□□ -2.11
CHMP4CQ96CF2 RPL30P7-201ENST00000479312 323 ntBASIC1.85□□□□□ -2.11
CHMP4CQ96CF2 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.85□□□□□ -2.11
CHMP4CQ96CF2 SCARNA8-201ENST00000515924 131 ntBASIC1.85□□□□□ -2.11
CHMP4CQ96CF2 RNU6-1299P-201ENST00000516316 100 ntBASIC1.85□□□□□ -2.11
CHMP4CQ96CF2 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CHMP4CQ96CF2 Z83818.1-201ENST00000603584 150 ntBASIC1.85□□□□□ -2.11
CHMP4CQ96CF2 AL121890.5-201ENST00000620848 304 ntBASIC1.85□□□□□ -2.11
CHMP4CQ96CF2 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
CHMP4CQ96CF2 RNU6-268P-201ENST00000364174 107 ntBASIC1.84□□□□□ -2.11
CHMP4CQ96CF2 SNORA26-201ENST00000391286 122 ntBASIC1.84□□□□□ -2.11
CHMP4CQ96CF2 Y_RNA.622-201ENST00000411091 108 ntBASIC1.84□□□□□ -2.11
CHMP4CQ96CF2 RNU2-55P-201ENST00000411146 174 ntBASIC1.84□□□□□ -2.11
CHMP4CQ96CF2 AC023790.1-201ENST00000482174 347 ntBASIC1.84□□□□□ -2.11
CHMP4CQ96CF2 RNU6-902P-201ENST00000517212 91 ntBASIC1.84□□□□□ -2.11
CHMP4CQ96CF2 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.84□□□□□ -2.11
CHMP4CQ96CF2 AC130289.1-201ENST00000577321 73 ntBASIC1.84□□□□□ -2.11
CHMP4CQ96CF2 AC006441.5-201ENST00000612680 209 ntBASIC1.84□□□□□ -2.11
CHMP4CQ96CF2 AC015726.2-201ENST00000620112 122 ntBASIC1.84□□□□□ -2.11
CHMP4CQ96CF2 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
CHMP4CQ96CF2 RNU6-1020P-201ENST00000363684 107 ntBASIC1.83□□□□□ -2.12
CHMP4CQ96CF2 RNU6-728P-201ENST00000365375 104 ntBASIC1.83□□□□□ -2.12
CHMP4CQ96CF2 Y_RNA.432-201ENST00000384087 111 ntBASIC1.83□□□□□ -2.12
CHMP4CQ96CF2 RNU4-70P-201ENST00000384579 139 ntBASIC1.83□□□□□ -2.12
CHMP4CQ96CF2 SNORA79-201ENST00000408376 140 ntBASIC1.83□□□□□ -2.12
CHMP4CQ96CF2 RNU2-70P-201ENST00000410718 179 ntBASIC1.83□□□□□ -2.12
CHMP4CQ96CF2 RNU6-847P-201ENST00000411115 108 ntBASIC1.83□□□□□ -2.12
CHMP4CQ96CF2 MIR4744-201ENST00000581563 82 ntBASIC1.83□□□□□ -2.12
CHMP4CQ96CF2 AL357312.1-201ENST00000603879 298 ntBASIC1.83□□□□□ -2.12
CHMP4CQ96CF2 RNU2-4P-201ENST00000606190 192 ntBASIC1.83□□□□□ -2.12
CHMP4CQ96CF2 BX248123.2-201ENST00000606318 124 ntBASIC1.83□□□□□ -2.12
CHMP4CQ96CF2 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CHMP4CQ96CF2 Y_RNA.121-201ENST00000363309 113 ntBASIC1.82□□□□□ -2.12
CHMP4CQ96CF2 Y_RNA.238-201ENST00000364441 102 ntBASIC1.82□□□□□ -2.12
CHMP4CQ96CF2 RNU6-60P-201ENST00000364792 103 ntBASIC1.82□□□□□ -2.12
CHMP4CQ96CF2 Y_RNA.571-201ENST00000384753 98 ntBASIC1.82□□□□□ -2.12
CHMP4CQ96CF2 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.82□□□□□ -2.12
CHMP4CQ96CF2 RPS27P16-201ENST00000425758 201 ntBASIC1.82□□□□□ -2.12
CHMP4CQ96CF2 SNRPGP14-201ENST00000435400 219 ntBASIC1.82□□□□□ -2.12
CHMP4CQ96CF2 Y_RNA.797-201ENST00000515977 94 ntBASIC1.82□□□□□ -2.12
CHMP4CQ96CF2 RNU6-365P-201ENST00000517113 106 ntBASIC1.82□□□□□ -2.12
CHMP4CQ96CF2 SNORD53B-201ENST00000577887 78 ntBASIC1.82□□□□□ -2.12
CHMP4CQ96CF2 MIR4308-201ENST00000580634 81 ntBASIC1.82□□□□□ -2.12
CHMP4CQ96CF2 AP001485.1-201ENST00000604799 199 ntBASIC1.82□□□□□ -2.12
CHMP4CQ96CF2 GHRLOS.1-201ENST00000610995 70 ntBASIC1.82□□□□□ -2.12
CHMP4CQ96CF2 Y_RNA.257-201ENST00000364596 102 ntBASIC1.81□□□□□ -2.12
CHMP4CQ96CF2 Y_RNA.297-201ENST00000364950 91 ntBASIC1.81□□□□□ -2.12
CHMP4CQ96CF2 Y_RNA.486-201ENST00000384398 107 ntBASIC1.81□□□□□ -2.12
CHMP4CQ96CF2 RNU6-970P-201ENST00000516312 107 ntBASIC1.81□□□□□ -2.12
CHMP4CQ96CF2 SNORD45.3-201ENST00000363836 72 ntBASIC1.8□□□□□ -2.12
CHMP4CQ96CF2 MIR1304-201ENST00000408243 91 ntBASIC1.8□□□□□ -2.12
CHMP4CQ96CF2 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.8□□□□□ -2.12
CHMP4CQ96CF2 AP1B1P2-201ENST00000416196 106 ntBASIC1.8□□□□□ -2.12
CHMP4CQ96CF2 AL121914.1-201ENST00000450188 156 ntBASIC1.8□□□□□ -2.12
CHMP4CQ96CF2 RNU7-95P-201ENST00000459222 64 ntBASIC1.8□□□□□ -2.12
CHMP4CQ96CF2 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.8□□□□□ -2.12
CHMP4CQ96CF2 SNORA18.7-201ENST00000516910 131 ntBASIC1.8□□□□□ -2.12
CHMP4CQ96CF2 AL512310.8-201ENST00000550183 120 ntBASIC1.8□□□□□ -2.12
CHMP4CQ96CF2 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms