Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 RNU6-1007P-201ENST00000516586 107 ntBASIC1.27□□□□□ -2.21
RFT1Q96AA3 SNORD53B-201ENST00000577887 78 ntBASIC1.27□□□□□ -2.21
RFT1Q96AA3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.27□□□□□ -2.21
RFT1Q96AA3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.27□□□□□ -2.21
RFT1Q96AA3 RNU6-1209P-201ENST00000363655 107 ntBASIC1.26□□□□□ -2.21
RFT1Q96AA3 Y_RNA.170-201ENST00000363746 110 ntBASIC1.26□□□□□ -2.21
RFT1Q96AA3 RNY1P11-201ENST00000363759 113 ntBASIC1.26□□□□□ -2.21
RFT1Q96AA3 RNU6-674P-201ENST00000363831 107 ntBASIC1.26□□□□□ -2.21
RFT1Q96AA3 Y_RNA.203-201ENST00000364106 102 ntBASIC1.26□□□□□ -2.21
RFT1Q96AA3 Y_RNA.265-201ENST00000364677 108 ntBASIC1.26□□□□□ -2.21
RFT1Q96AA3 Y_RNA.267-201ENST00000364679 109 ntBASIC1.26□□□□□ -2.21
RFT1Q96AA3 MIR616-201ENST00000385293 97 ntBASIC1.26□□□□□ -2.21
RFT1Q96AA3 RNU6-578P-201ENST00000390980 103 ntBASIC1.26□□□□□ -2.21
RFT1Q96AA3 RNA5SP482-201ENST00000391269 118 ntBASIC1.26□□□□□ -2.21
RFT1Q96AA3 SNORD11-201ENST00000459124 84 ntBASIC1.26□□□□□ -2.21
RFT1Q96AA3 SNORD13-201ENST00000459299 104 ntBASIC1.26□□□□□ -2.21
RFT1Q96AA3 MIR3664-201ENST00000579074 99 ntBASIC1.26□□□□□ -2.21
RFT1Q96AA3 MIR4724-201ENST00000579485 89 ntBASIC1.26□□□□□ -2.21
RFT1Q96AA3 AL049861.1-201ENST00000603130 150 ntBASIC1.26□□□□□ -2.21
RFT1Q96AA3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.26□□□□□ -2.21
RFT1Q96AA3 MIR367-201ENST00000362299 68 ntBASIC1.25□□□□□ -2.21
RFT1Q96AA3 Y_RNA.8-201ENST00000362353 102 ntBASIC1.25□□□□□ -2.21
RFT1Q96AA3 Y_RNA.253-201ENST00000364562 112 ntBASIC1.25□□□□□ -2.21
RFT1Q96AA3 Y_RNA.398-201ENST00000383952 99 ntBASIC1.25□□□□□ -2.21
RFT1Q96AA3 Y_RNA.441-201ENST00000384123 112 ntBASIC1.25□□□□□ -2.21
RFT1Q96AA3 RNU6-187P-201ENST00000384139 106 ntBASIC1.25□□□□□ -2.21
RFT1Q96AA3 Y_RNA.506-201ENST00000384494 102 ntBASIC1.25□□□□□ -2.21
RFT1Q96AA3 RNU4-70P-201ENST00000384579 139 ntBASIC1.25□□□□□ -2.21
RFT1Q96AA3 RNU6-1228P-201ENST00000391014 107 ntBASIC1.25□□□□□ -2.21
RFT1Q96AA3 AL606845.1-201ENST00000404881 255 ntBASIC1.25□□□□□ -2.21
RFT1Q96AA3 RNU6-394P-201ENST00000410735 107 ntBASIC1.25□□□□□ -2.21
RFT1Q96AA3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.25□□□□□ -2.21
RFT1Q96AA3 CALM2P4-201ENST00000430810 426 ntBASIC1.25□□□□□ -2.21
RFT1Q96AA3 AC233266.1-201ENST00000454518 96 ntBASIC1.25□□□□□ -2.21
RFT1Q96AA3 AC092991.1-201ENST00000477176 376 ntBASIC1.25□□□□□ -2.21
RFT1Q96AA3 RN7SKP164-201ENST00000516138 266 ntBASIC1.25□□□□□ -2.21
RFT1Q96AA3 RNU6-346P-201ENST00000516288 111 ntBASIC1.25□□□□□ -2.21
RFT1Q96AA3 RNA5SP168-201ENST00000516642 112 ntBASIC1.25□□□□□ -2.21
RFT1Q96AA3 RNU7-116P-201ENST00000516940 62 ntBASIC1.25□□□□□ -2.21
RFT1Q96AA3 RNU6-1212P-201ENST00000517023 104 ntBASIC1.25□□□□□ -2.21
RFT1Q96AA3 AC109810.1-201ENST00000534066 224 ntBASIC1.25□□□□□ -2.21
RFT1Q96AA3 RPL23AP91-201ENST00000569211 455 ntBASIC1.25□□□□□ -2.21
RFT1Q96AA3 MIR4744-201ENST00000581563 82 ntBASIC1.25□□□□□ -2.21
RFT1Q96AA3 AC242852.1-201ENST00000612151 96 ntBASIC1.25□□□□□ -2.21
RFT1Q96AA3 AC244015.1-201ENST00000622301 99 ntBASIC1.25□□□□□ -2.21
RFT1Q96AA3 MIR3658-201ENST00000636291 56 ntBASIC1.25□□□□□ -2.21
RFT1Q96AA3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
RFT1Q96AA3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
RFT1Q96AA3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.24□□□□□ -2.21
RFT1Q96AA3 Y_RNA.75-201ENST00000362927 97 ntBASIC1.24□□□□□ -2.21
RFT1Q96AA3 Y_RNA.121-201ENST00000363309 113 ntBASIC1.24□□□□□ -2.21
RFT1Q96AA3 RNU4-41P-201ENST00000364426 143 ntBASIC1.24□□□□□ -2.21
RFT1Q96AA3 RNU6-275P-201ENST00000364910 107 ntBASIC1.24□□□□□ -2.21
RFT1Q96AA3 RNU6-144P-201ENST00000383951 107 ntBASIC1.24□□□□□ -2.21
RFT1Q96AA3 Y_RNA.464-201ENST00000384282 110 ntBASIC1.24□□□□□ -2.21
RFT1Q96AA3 RNU6-125P-201ENST00000384505 107 ntBASIC1.24□□□□□ -2.21
RFT1Q96AA3 MIR517C-201ENST00000385103 95 ntBASIC1.24□□□□□ -2.21
RFT1Q96AA3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
RFT1Q96AA3 SNORA67.6-201ENST00000391093 99 ntBASIC1.24□□□□□ -2.21
RFT1Q96AA3 U8.16-201ENST00000391279 133 ntBASIC1.24□□□□□ -2.21
RFT1Q96AA3 Y_RNA.621-201ENST00000411065 96 ntBASIC1.24□□□□□ -2.21
RFT1Q96AA3 Y_RNA.622-201ENST00000411091 108 ntBASIC1.24□□□□□ -2.21
RFT1Q96AA3 SNRPGP10-201ENST00000432323 225 ntBASIC1.24□□□□□ -2.21
RFT1Q96AA3 SNRPGP8-201ENST00000454064 226 ntBASIC1.24□□□□□ -2.21
RFT1Q96AA3 Y_RNA.662-201ENST00000516028 97 ntBASIC1.24□□□□□ -2.21
RFT1Q96AA3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
RFT1Q96AA3 CYP3A52P-201ENST00000563326 91 ntBASIC1.24□□□□□ -2.21
RFT1Q96AA3 MIR3144-201ENST00000579460 79 ntBASIC1.24□□□□□ -2.21
RFT1Q96AA3 MIR3683-201ENST00000580847 82 ntBASIC1.24□□□□□ -2.21
RFT1Q96AA3 AL591926.4-201ENST00000616895 298 ntBASIC1.24□□□□□ -2.21
RFT1Q96AA3 MIRLET7C-201ENST00000362160 84 ntBASIC1.23□□□□□ -2.21
RFT1Q96AA3 SNORD45.3-201ENST00000363836 72 ntBASIC1.23□□□□□ -2.21
RFT1Q96AA3 RNU6-1336P-201ENST00000383886 109 ntBASIC1.23□□□□□ -2.21
RFT1Q96AA3 RNU6-484P-201ENST00000384016 107 ntBASIC1.23□□□□□ -2.21
RFT1Q96AA3 MIR653-201ENST00000385279 96 ntBASIC1.23□□□□□ -2.21
RFT1Q96AA3 SNORD72-201ENST00000390994 80 ntBASIC1.23□□□□□ -2.21
RFT1Q96AA3 Y_RNA.587-201ENST00000391210 103 ntBASIC1.23□□□□□ -2.21
RFT1Q96AA3 SNRPGP13-201ENST00000442212 177 ntBASIC1.23□□□□□ -2.21
RFT1Q96AA3 Y_RNA.797-201ENST00000515977 94 ntBASIC1.23□□□□□ -2.21
RFT1Q96AA3 RNU6-1116P-201ENST00000517269 99 ntBASIC1.23□□□□□ -2.21
RFT1Q96AA3 MIR3133-201ENST00000583157 78 ntBASIC1.23□□□□□ -2.21
RFT1Q96AA3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
RFT1Q96AA3 AL513534.2-201ENST00000603836 250 ntBASIC1.23□□□□□ -2.21
RFT1Q96AA3 AL645939.4-201ENST00000604495 135 ntBASIC1.23□□□□□ -2.21
RFT1Q96AA3 AL391903.3-201ENST00000612158 163 ntBASIC1.23□□□□□ -2.21
RFT1Q96AA3 RNU6-199P-201ENST00000362954 107 ntBASIC1.22□□□□□ -2.21
RFT1Q96AA3 Y_RNA.91-201ENST00000363042 107 ntBASIC1.22□□□□□ -2.21
RFT1Q96AA3 Y_RNA.272-201ENST00000364696 102 ntBASIC1.22□□□□□ -2.21
RFT1Q96AA3 RNU6-60P-201ENST00000364792 103 ntBASIC1.22□□□□□ -2.21
RFT1Q96AA3 RNU6-939P-201ENST00000384634 107 ntBASIC1.22□□□□□ -2.21
RFT1Q96AA3 MIR15B-201ENST00000385045 98 ntBASIC1.22□□□□□ -2.21
RFT1Q96AA3 MIR758-201ENST00000390227 88 ntBASIC1.22□□□□□ -2.21
RFT1Q96AA3 RNA5SP272-201ENST00000516095 111 ntBASIC1.22□□□□□ -2.21
RFT1Q96AA3 RNU6-548P-201ENST00000517083 115 ntBASIC1.22□□□□□ -2.21
RFT1Q96AA3 SNORA31.24-201ENST00000517232 57 ntBASIC1.22□□□□□ -2.21
RFT1Q96AA3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.22□□□□□ -2.21
RFT1Q96AA3 MIR4778-201ENST00000577635 80 ntBASIC1.22□□□□□ -2.21
RFT1Q96AA3 Y_RNA.23-201ENST00000362496 106 ntBASIC1.21□□□□□ -2.22
RFT1Q96AA3 RNU6-103P-201ENST00000363686 107 ntBASIC1.21□□□□□ -2.22
RFT1Q96AA3 RNU4-84P-201ENST00000364200 139 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 214.1 ms