Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC015688.6-201ENST00000577737 104 ntBASIC1.9□□□□□ -2.11
HPS3Q969F9 MIR4308-201ENST00000580634 81 ntBASIC1.9□□□□□ -2.11
HPS3Q969F9 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.9□□□□□ -2.11
HPS3Q969F9 RNU2-4P-201ENST00000606190 192 ntBASIC1.9□□□□□ -2.11
HPS3Q969F9 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.9□□□□□ -2.11
HPS3Q969F9 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HPS3Q969F9 SNORD38C-201ENST00000384381 69 ntBASIC1.89□□□□□ -2.11
HPS3Q969F9 MIR934-201ENST00000401241 83 ntBASIC1.89□□□□□ -2.11
HPS3Q969F9 AC108059.2-201ENST00000434626 151 ntBASIC1.89□□□□□ -2.11
HPS3Q969F9 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.89□□□□□ -2.11
HPS3Q969F9 AC005908.1-201ENST00000468701 347 ntBASIC1.89□□□□□ -2.11
HPS3Q969F9 RNU6-1299P-201ENST00000516316 100 ntBASIC1.89□□□□□ -2.11
HPS3Q969F9 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.89□□□□□ -2.11
HPS3Q969F9 MIR3122-201ENST00000577243 73 ntBASIC1.89□□□□□ -2.11
HPS3Q969F9 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.89□□□□□ -2.11
HPS3Q969F9 Y_RNA.29-201ENST00000362570 113 ntBASIC1.88□□□□□ -2.11
HPS3Q969F9 Y_RNA.435-201ENST00000384095 112 ntBASIC1.88□□□□□ -2.11
HPS3Q969F9 SNORD72-201ENST00000390994 80 ntBASIC1.88□□□□□ -2.11
HPS3Q969F9 RNU6-918P-201ENST00000391219 106 ntBASIC1.88□□□□□ -2.11
HPS3Q969F9 SNORA79-201ENST00000408376 140 ntBASIC1.88□□□□□ -2.11
HPS3Q969F9 RNU6-322P-201ENST00000516010 103 ntBASIC1.88□□□□□ -2.11
HPS3Q969F9 AC106754.2-201ENST00000623006 233 ntBASIC1.88□□□□□ -2.11
HPS3Q969F9 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.88□□□□□ -2.11
HPS3Q969F9 MIR337-201ENST00000362281 93 ntBASIC1.87□□□□□ -2.11
HPS3Q969F9 Y_RNA.182-201ENST00000363880 111 ntBASIC1.87□□□□□ -2.11
HPS3Q969F9 Y_RNA.432-201ENST00000384087 111 ntBASIC1.87□□□□□ -2.11
HPS3Q969F9 RNU6-578P-201ENST00000390980 103 ntBASIC1.87□□□□□ -2.11
HPS3Q969F9 AL627390.1-201ENST00000396055 340 ntBASIC1.87□□□□□ -2.11
HPS3Q969F9 Y_RNA.622-201ENST00000411091 108 ntBASIC1.87□□□□□ -2.11
HPS3Q969F9 AC079140.2-201ENST00000506193 142 ntBASIC1.87□□□□□ -2.11
HPS3Q969F9 RNU6-250P-201ENST00000516958 103 ntBASIC1.87□□□□□ -2.11
HPS3Q969F9 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.87□□□□□ -2.11
HPS3Q969F9 CBX3P4-201ENST00000538909 354 ntBASIC1.87□□□□□ -2.11
HPS3Q969F9 MIR3618-201ENST00000580330 88 ntBASIC1.87□□□□□ -2.11
HPS3Q969F9 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.87□□□□□ -2.11
HPS3Q969F9 AC072026.1-201ENST00000605023 201 ntBASIC1.87□□□□□ -2.11
HPS3Q969F9 RNU6-457P-201ENST00000363999 107 ntBASIC1.86□□□□□ -2.11
HPS3Q969F9 SNORA2.2-201ENST00000365473 135 ntBASIC1.86□□□□□ -2.11
HPS3Q969F9 Y_RNA.785-201ENST00000384290 109 ntBASIC1.86□□□□□ -2.11
HPS3Q969F9 RNU2-70P-201ENST00000410718 179 ntBASIC1.86□□□□□ -2.11
HPS3Q969F9 AC108667.1-201ENST00000428618 249 ntBASIC1.86□□□□□ -2.11
HPS3Q969F9 MTND5P15-201ENST00000434246 349 ntBASIC1.86□□□□□ -2.11
HPS3Q969F9 AC015922.2-201ENST00000435593 184 ntBASIC1.86□□□□□ -2.11
HPS3Q969F9 AL121914.1-201ENST00000450188 156 ntBASIC1.86□□□□□ -2.11
HPS3Q969F9 SNORA25.15-201ENST00000516487 89 ntBASIC1.86□□□□□ -2.11
HPS3Q969F9 SNORA81.3-201ENST00000517283 198 ntBASIC1.86□□□□□ -2.11
HPS3Q969F9 AP002392.1-201ENST00000537692 208 ntBASIC1.86□□□□□ -2.11
HPS3Q969F9 snoU13.31-201ENST00000607291 104 ntBASIC1.86□□□□□ -2.11
HPS3Q969F9 MIR378A-201ENST00000362177 66 ntBASIC1.85□□□□□ -2.11
HPS3Q969F9 SNORD1A-201ENST00000364968 72 ntBASIC1.85□□□□□ -2.11
HPS3Q969F9 RNA5SP363-201ENST00000365072 115 ntBASIC1.85□□□□□ -2.11
HPS3Q969F9 RNU6-47P-201ENST00000383866 107 ntBASIC1.85□□□□□ -2.11
HPS3Q969F9 RNU6-1065P-201ENST00000384513 106 ntBASIC1.85□□□□□ -2.11
HPS3Q969F9 MIR15B-201ENST00000385045 98 ntBASIC1.85□□□□□ -2.11
HPS3Q969F9 MIR136-201ENST00000385207 82 ntBASIC1.85□□□□□ -2.11
HPS3Q969F9 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.85□□□□□ -2.11
HPS3Q969F9 SNRPGP8-201ENST00000454064 226 ntBASIC1.85□□□□□ -2.11
HPS3Q969F9 RNU6-182P-201ENST00000516970 105 ntBASIC1.85□□□□□ -2.11
HPS3Q969F9 RNU6-365P-201ENST00000517113 106 ntBASIC1.85□□□□□ -2.11
HPS3Q969F9 AC109810.1-201ENST00000534066 224 ntBASIC1.85□□□□□ -2.11
HPS3Q969F9 MIR4422-201ENST00000581938 83 ntBASIC1.85□□□□□ -2.11
HPS3Q969F9 AC108706.1-201ENST00000611053 297 ntBASIC1.85□□□□□ -2.11
HPS3Q969F9 AC006441.5-201ENST00000612680 209 ntBASIC1.85□□□□□ -2.11
HPS3Q969F9 RNU6-268P-201ENST00000364174 107 ntBASIC1.84□□□□□ -2.11
HPS3Q969F9 Y_RNA.233-201ENST00000364407 101 ntBASIC1.84□□□□□ -2.11
HPS3Q969F9 Y_RNA.486-201ENST00000384398 107 ntBASIC1.84□□□□□ -2.11
HPS3Q969F9 SNX2P2-201ENST00000424553 323 ntBASIC1.84□□□□□ -2.11
HPS3Q969F9 RNA5SP153-201ENST00000516498 76 ntBASIC1.84□□□□□ -2.11
HPS3Q969F9 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.84□□□□□ -2.11
HPS3Q969F9 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
HPS3Q969F9 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
HPS3Q969F9 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
HPS3Q969F9 Y_RNA.75-201ENST00000362927 97 ntBASIC1.83□□□□□ -2.12
HPS3Q969F9 SNORD45.3-201ENST00000363836 72 ntBASIC1.83□□□□□ -2.12
HPS3Q969F9 RNU1-78P-201ENST00000391248 165 ntBASIC1.83□□□□□ -2.12
HPS3Q969F9 AL451046.2-201ENST00000403074 277 ntBASIC1.83□□□□□ -2.12
HPS3Q969F9 AC090049.2-201ENST00000550377 109 ntBASIC1.83□□□□□ -2.12
HPS3Q969F9 MIR3937-201ENST00000580135 106 ntBASIC1.83□□□□□ -2.12
HPS3Q969F9 MIR3683-201ENST00000580847 82 ntBASIC1.83□□□□□ -2.12
HPS3Q969F9 MIR3668-201ENST00000582138 75 ntBASIC1.83□□□□□ -2.12
HPS3Q969F9 FAM106DP-201ENST00000586416 501 ntBASIC1.83□□□□□ -2.12
HPS3Q969F9 AL513534.2-201ENST00000603836 250 ntBASIC1.83□□□□□ -2.12
HPS3Q969F9 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
HPS3Q969F9 MIR302D-201ENST00000362275 68 ntBASIC1.82□□□□□ -2.12
HPS3Q969F9 RNU6-275P-201ENST00000364910 107 ntBASIC1.82□□□□□ -2.12
HPS3Q969F9 RNA5SP190-201ENST00000365222 118 ntBASIC1.82□□□□□ -2.12
HPS3Q969F9 RNU6-484P-201ENST00000384016 107 ntBASIC1.82□□□□□ -2.12
HPS3Q969F9 MIR653-201ENST00000385279 96 ntBASIC1.82□□□□□ -2.12
HPS3Q969F9 SNRPGP14-201ENST00000435400 219 ntBASIC1.82□□□□□ -2.12
HPS3Q969F9 RNU6-504P-201ENST00000516568 104 ntBASIC1.82□□□□□ -2.12
HPS3Q969F9 AC090142.3-201ENST00000519012 385 ntBASIC1.82□□□□□ -2.12
HPS3Q969F9 AL160236.1-201ENST00000556317 195 ntBASIC1.82□□□□□ -2.12
HPS3Q969F9 Y_RNA.226-201ENST00000364337 114 ntBASIC1.81□□□□□ -2.12
HPS3Q969F9 MIR516B2-201ENST00000385190 85 ntBASIC1.81□□□□□ -2.12
HPS3Q969F9 RNU4-43P-201ENST00000410628 137 ntBASIC1.81□□□□□ -2.12
HPS3Q969F9 SNRPGP13-201ENST00000442212 177 ntBASIC1.81□□□□□ -2.12
HPS3Q969F9 RNU7-120P-201ENST00000459334 63 ntBASIC1.81□□□□□ -2.12
HPS3Q969F9 AC092991.1-201ENST00000477176 376 ntBASIC1.81□□□□□ -2.12
HPS3Q969F9 RNU6-917P-201ENST00000516294 104 ntBASIC1.81□□□□□ -2.12
HPS3Q969F9 RNU6-197P-201ENST00000516680 100 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 186.3 ms