Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC099513.1-201ENST00000490423 301 ntBASIC1.89□□□□□ -2.11
ATG4AQ8WYN0 RNU6-1116P-201ENST00000517269 99 ntBASIC1.89□□□□□ -2.11
ATG4AQ8WYN0 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.89□□□□□ -2.11
ATG4AQ8WYN0 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.89□□□□□ -2.11
ATG4AQ8WYN0 AC006441.5-201ENST00000612680 209 ntBASIC1.89□□□□□ -2.11
ATG4AQ8WYN0 AL513423.1-201ENST00000621695 132 ntBASIC1.89□□□□□ -2.11
ATG4AQ8WYN0 MIR6844-201ENST00000637122 62 ntBASIC1.89□□□□□ -2.11
ATG4AQ8WYN0 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
ATG4AQ8WYN0 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
ATG4AQ8WYN0 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
ATG4AQ8WYN0 RNU6-818P-201ENST00000364837 108 ntBASIC1.88□□□□□ -2.11
ATG4AQ8WYN0 RNU4-11P-201ENST00000365287 132 ntBASIC1.88□□□□□ -2.11
ATG4AQ8WYN0 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
ATG4AQ8WYN0 SNORD37.2-201ENST00000391075 66 ntBASIC1.88□□□□□ -2.11
ATG4AQ8WYN0 SNORA75.5-201ENST00000391291 81 ntBASIC1.88□□□□□ -2.11
ATG4AQ8WYN0 RNU4-61P-201ENST00000411243 107 ntBASIC1.88□□□□□ -2.11
ATG4AQ8WYN0 Y_RNA.666-201ENST00000516187 112 ntBASIC1.88□□□□□ -2.11
ATG4AQ8WYN0 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
ATG4AQ8WYN0 RNU6-199P-201ENST00000362954 107 ntBASIC1.87□□□□□ -2.11
ATG4AQ8WYN0 RNU6-888P-201ENST00000363010 101 ntBASIC1.87□□□□□ -2.11
ATG4AQ8WYN0 RNU6-833P-201ENST00000363486 107 ntBASIC1.87□□□□□ -2.11
ATG4AQ8WYN0 SNORA25.7-201ENST00000364375 127 ntBASIC1.87□□□□□ -2.11
ATG4AQ8WYN0 Y_RNA.488-201ENST00000384403 102 ntBASIC1.87□□□□□ -2.11
ATG4AQ8WYN0 MIR891A-201ENST00000401237 79 ntBASIC1.87□□□□□ -2.11
ATG4AQ8WYN0 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.87□□□□□ -2.11
ATG4AQ8WYN0 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.87□□□□□ -2.11
ATG4AQ8WYN0 SNRPGP13-201ENST00000442212 177 ntBASIC1.87□□□□□ -2.11
ATG4AQ8WYN0 snoU13.15-201ENST00000459407 104 ntBASIC1.87□□□□□ -2.11
ATG4AQ8WYN0 AC007751.1-201ENST00000529260 376 ntBASIC1.87□□□□□ -2.11
ATG4AQ8WYN0 MIR4287-201ENST00000579398 78 ntBASIC1.87□□□□□ -2.11
ATG4AQ8WYN0 MIR548X2-201ENST00000579776 100 ntBASIC1.87□□□□□ -2.11
ATG4AQ8WYN0 AL773524.1-201ENST00000614065 229 ntBASIC1.87□□□□□ -2.11
ATG4AQ8WYN0 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.87□□□□□ -2.11
ATG4AQ8WYN0 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
ATG4AQ8WYN0 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.87□□□□□ -2.11
ATG4AQ8WYN0 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
ATG4AQ8WYN0 RNU6-268P-201ENST00000364174 107 ntBASIC1.86□□□□□ -2.11
ATG4AQ8WYN0 SNORD48-201ENST00000364953 64 ntBASIC1.86□□□□□ -2.11
ATG4AQ8WYN0 SNORD61-201ENST00000384252 73 ntBASIC1.86□□□□□ -2.11
ATG4AQ8WYN0 MIR504-201ENST00000385065 83 ntBASIC1.86□□□□□ -2.11
ATG4AQ8WYN0 AC244636.1-201ENST00000421152 228 ntBASIC1.86□□□□□ -2.11
ATG4AQ8WYN0 RNU7-12P-201ENST00000516030 62 ntBASIC1.86□□□□□ -2.11
ATG4AQ8WYN0 AC112693.2-201ENST00000556538 232 ntBASIC1.86□□□□□ -2.11
ATG4AQ8WYN0 AL365205.2-201ENST00000594586 68 ntBASIC1.86□□□□□ -2.11
ATG4AQ8WYN0 MIR7843-201ENST00000622274 79 ntBASIC1.86□□□□□ -2.11
ATG4AQ8WYN0 Y_RNA.343-201ENST00000365354 112 ntBASIC1.85□□□□□ -2.11
ATG4AQ8WYN0 SNORD50.2-201ENST00000365465 70 ntBASIC1.85□□□□□ -2.11
ATG4AQ8WYN0 MIR548A2-201ENST00000384956 97 ntBASIC1.85□□□□□ -2.11
ATG4AQ8WYN0 MIR9-3-201ENST00000385084 90 ntBASIC1.85□□□□□ -2.11
ATG4AQ8WYN0 MIR569-201ENST00000385228 96 ntBASIC1.85□□□□□ -2.11
ATG4AQ8WYN0 MIR660-201ENST00000385235 97 ntBASIC1.85□□□□□ -2.11
ATG4AQ8WYN0 MIR613-201ENST00000385248 95 ntBASIC1.85□□□□□ -2.11
ATG4AQ8WYN0 MIR513C-201ENST00000401352 84 ntBASIC1.85□□□□□ -2.11
ATG4AQ8WYN0 MIR548O-201ENST00000408583 114 ntBASIC1.85□□□□□ -2.11
ATG4AQ8WYN0 AL445685.2-201ENST00000422551 342 ntBASIC1.85□□□□□ -2.11
ATG4AQ8WYN0 PGBD4P5-201ENST00000445958 426 ntBASIC1.85□□□□□ -2.11
ATG4AQ8WYN0 RNU6-693P-201ENST00000516134 107 ntBASIC1.85□□□□□ -2.11
ATG4AQ8WYN0 RNU6-1270P-201ENST00000517128 108 ntBASIC1.85□□□□□ -2.11
ATG4AQ8WYN0 AC022254.1-201ENST00000567857 235 ntBASIC1.85□□□□□ -2.11
ATG4AQ8WYN0 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
ATG4AQ8WYN0 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
ATG4AQ8WYN0 MIR424-201ENST00000362227 98 ntBASIC1.84□□□□□ -2.11
ATG4AQ8WYN0 RNU6-1082P-201ENST00000364574 107 ntBASIC1.84□□□□□ -2.11
ATG4AQ8WYN0 Y_RNA.542-201ENST00000384641 111 ntBASIC1.84□□□□□ -2.11
ATG4AQ8WYN0 MIR518F-201ENST00000384973 87 ntBASIC1.84□□□□□ -2.11
ATG4AQ8WYN0 RNU6-588P-201ENST00000410281 105 ntBASIC1.84□□□□□ -2.11
ATG4AQ8WYN0 SNORA25.12-201ENST00000516202 82 ntBASIC1.84□□□□□ -2.11
ATG4AQ8WYN0 AC090142.3-201ENST00000519012 385 ntBASIC1.84□□□□□ -2.11
ATG4AQ8WYN0 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
ATG4AQ8WYN0 AC024614.2-201ENST00000577584 372 ntBASIC1.84□□□□□ -2.11
ATG4AQ8WYN0 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
ATG4AQ8WYN0 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
ATG4AQ8WYN0 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
ATG4AQ8WYN0 SNORD114-1-201ENST00000362705 72 ntBASIC1.83□□□□□ -2.12
ATG4AQ8WYN0 SNORD38C-201ENST00000384381 69 ntBASIC1.83□□□□□ -2.12
ATG4AQ8WYN0 MIR17-201ENST00000385012 84 ntBASIC1.83□□□□□ -2.12
ATG4AQ8WYN0 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.83□□□□□ -2.12
ATG4AQ8WYN0 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.83□□□□□ -2.12
ATG4AQ8WYN0 RNU7-25P-201ENST00000516544 62 ntBASIC1.83□□□□□ -2.12
ATG4AQ8WYN0 SNORD3E-202ENST00000627253 216 ntBASIC1.83□□□□□ -2.12
ATG4AQ8WYN0 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.83□□□□□ -2.12
ATG4AQ8WYN0 AL442644.1-201ENST00000454390 3105 ntBASIC1.82□□□□□ -2.12
ATG4AQ8WYN0 RNU6-1123P-201ENST00000362347 106 ntBASIC1.82□□□□□ -2.12
ATG4AQ8WYN0 RNU6-704P-201ENST00000364162 103 ntBASIC1.82□□□□□ -2.12
ATG4AQ8WYN0 RNU6-1336P-201ENST00000383886 109 ntBASIC1.82□□□□□ -2.12
ATG4AQ8WYN0 SNORA1-201ENST00000384107 130 ntBASIC1.82□□□□□ -2.12
ATG4AQ8WYN0 RNU7-197P-201ENST00000458836 62 ntBASIC1.82□□□□□ -2.12
ATG4AQ8WYN0 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.82□□□□□ -2.12
ATG4AQ8WYN0 RNU6-426P-201ENST00000516464 97 ntBASIC1.82□□□□□ -2.12
ATG4AQ8WYN0 MIR4299-201ENST00000577899 72 ntBASIC1.82□□□□□ -2.12
ATG4AQ8WYN0 MIR4713-201ENST00000582691 75 ntBASIC1.82□□□□□ -2.12
ATG4AQ8WYN0 AC012493.3-201ENST00000604494 112 ntBASIC1.82□□□□□ -2.12
ATG4AQ8WYN0 ZNF355P-201ENST00000427301 3216 ntBASIC1.82□□□□□ -2.12
ATG4AQ8WYN0 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.81□□□□□ -2.12
ATG4AQ8WYN0 RNU6-661P-201ENST00000362409 107 ntBASIC1.81□□□□□ -2.12
ATG4AQ8WYN0 RNU6-203P-201ENST00000384038 104 ntBASIC1.81□□□□□ -2.12
ATG4AQ8WYN0 Y_RNA.568-201ENST00000384742 113 ntBASIC1.81□□□□□ -2.12
ATG4AQ8WYN0 MIR452-201ENST00000385020 85 ntBASIC1.81□□□□□ -2.12
ATG4AQ8WYN0 MIR624-201ENST00000385217 97 ntBASIC1.81□□□□□ -2.12
ATG4AQ8WYN0 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms