Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 Y_RNA.128-201ENST00000363391 112 ntBASIC0.65□□□□□ -2.31
SHROOM3Q8TF72 Y_RNA.330-201ENST00000365230 109 ntBASIC0.65□□□□□ -2.31
SHROOM3Q8TF72 Y_RNA.389-201ENST00000383924 113 ntBASIC0.65□□□□□ -2.31
SHROOM3Q8TF72 Y_RNA.418-201ENST00000384029 102 ntBASIC0.65□□□□□ -2.31
SHROOM3Q8TF72 RNU6-125P-201ENST00000384505 107 ntBASIC0.65□□□□□ -2.31
SHROOM3Q8TF72 MIR452-201ENST00000385020 85 ntBASIC0.65□□□□□ -2.31
SHROOM3Q8TF72 MIR618-201ENST00000385287 98 ntBASIC0.65□□□□□ -2.31
SHROOM3Q8TF72 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
SHROOM3Q8TF72 SNORD115-46-201ENST00000390982 71 ntBASIC0.65□□□□□ -2.31
SHROOM3Q8TF72 AC104332.1-201ENST00000440471 797 ntBASIC0.65□□□□□ -2.31
SHROOM3Q8TF72 HMGN1P10-201ENST00000474557 553 ntBASIC0.65□□□□□ -2.31
SHROOM3Q8TF72 RNU6-635P-201ENST00000516651 102 ntBASIC0.65□□□□□ -2.31
SHROOM3Q8TF72 PART1_1.1-201ENST00000611761 217 ntBASIC0.65□□□□□ -2.31
SHROOM3Q8TF72 AC068647.2-201ENST00000637380 353 ntBASIC0.65□□□□□ -2.31
SHROOM3Q8TF72 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
SHROOM3Q8TF72 Y_RNA.16-201ENST00000362421 102 ntBASIC0.65□□□□□ -2.31
SHROOM3Q8TF72 RNU4-80P-201ENST00000363200 141 ntBASIC0.65□□□□□ -2.31
SHROOM3Q8TF72 RNA5SP499-201ENST00000363982 119 ntBASIC0.65□□□□□ -2.31
SHROOM3Q8TF72 RNU6-1048P-201ENST00000364054 107 ntBASIC0.65□□□□□ -2.31
SHROOM3Q8TF72 Y_RNA.526-201ENST00000384572 110 ntBASIC0.65□□□□□ -2.31
SHROOM3Q8TF72 MIR520C-201ENST00000385005 87 ntBASIC0.65□□□□□ -2.31
SHROOM3Q8TF72 AC113618.1-201ENST00000416747 285 ntBASIC0.65□□□□□ -2.31
SHROOM3Q8TF72 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.65□□□□□ -2.31
SHROOM3Q8TF72 AC010655.3-201ENST00000478818 450 ntBASIC0.65□□□□□ -2.31
SHROOM3Q8TF72 RNU4-57P-201ENST00000515980 135 ntBASIC0.65□□□□□ -2.31
SHROOM3Q8TF72 MIR4778-201ENST00000577635 80 ntBASIC0.65□□□□□ -2.31
SHROOM3Q8TF72 AC015688.6-201ENST00000577737 104 ntBASIC0.65□□□□□ -2.31
SHROOM3Q8TF72 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.65□□□□□ -2.31
SHROOM3Q8TF72 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.65□□□□□ -2.31
SHROOM3Q8TF72 RPS29P30-201ENST00000600975 111 ntBASIC0.65□□□□□ -2.31
SHROOM3Q8TF72 AC004832.4-201ENST00000608952 331 ntBASIC0.65□□□□□ -2.31
SHROOM3Q8TF72 RNU6-290P-201ENST00000365212 101 ntBASIC0.64□□□□□ -2.31
SHROOM3Q8TF72 MIR606-201ENST00000384851 96 ntBASIC0.64□□□□□ -2.31
SHROOM3Q8TF72 MIR653-201ENST00000385279 96 ntBASIC0.64□□□□□ -2.31
SHROOM3Q8TF72 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
SHROOM3Q8TF72 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.64□□□□□ -2.31
SHROOM3Q8TF72 MTCO2P12-201ENST00000427426 682 ntBASIC0.64□□□□□ -2.31
SHROOM3Q8TF72 snoU13.25-201ENST00000458945 104 ntBASIC0.64□□□□□ -2.31
SHROOM3Q8TF72 SNORD11-201ENST00000459124 84 ntBASIC0.64□□□□□ -2.31
SHROOM3Q8TF72 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.64□□□□□ -2.31
SHROOM3Q8TF72 RNU7-28P-201ENST00000516759 62 ntBASIC0.64□□□□□ -2.31
SHROOM3Q8TF72 AC090142.3-201ENST00000519012 385 ntBASIC0.64□□□□□ -2.31
SHROOM3Q8TF72 MIR548AY-201ENST00000617669 107 ntBASIC0.64□□□□□ -2.31
SHROOM3Q8TF72 SEPT14P17-201ENST00000617978 177 ntBASIC0.64□□□□□ -2.31
SHROOM3Q8TF72 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
SHROOM3Q8TF72 Y_RNA.158-201ENST00000363651 101 ntBASIC0.63□□□□□ -2.31
SHROOM3Q8TF72 SNORA26.5-201ENST00000391215 123 ntBASIC0.63□□□□□ -2.31
SHROOM3Q8TF72 RNU6-985P-201ENST00000410182 104 ntBASIC0.63□□□□□ -2.31
SHROOM3Q8TF72 MIR1912-201ENST00000410389 80 ntBASIC0.63□□□□□ -2.31
SHROOM3Q8TF72 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.63□□□□□ -2.31
SHROOM3Q8TF72 SEPT14P8-201ENST00000508026 178 ntBASIC0.63□□□□□ -2.31
SHROOM3Q8TF72 SNORA40.15-201ENST00000516884 107 ntBASIC0.63□□□□□ -2.31
SHROOM3Q8TF72 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.63□□□□□ -2.31
SHROOM3Q8TF72 AC020661.2-201ENST00000560114 134 ntBASIC0.63□□□□□ -2.31
SHROOM3Q8TF72 RPL23AP91-201ENST00000569211 455 ntBASIC0.63□□□□□ -2.31
SHROOM3Q8TF72 AL022345.2-201ENST00000606307 135 ntBASIC0.63□□□□□ -2.31
SHROOM3Q8TF72 Y_RNA.11-201ENST00000362375 109 ntBASIC0.63□□□□□ -2.31
SHROOM3Q8TF72 RNU6-102P-201ENST00000384485 104 ntBASIC0.63□□□□□ -2.31
SHROOM3Q8TF72 RNU6-713P-201ENST00000384761 107 ntBASIC0.63□□□□□ -2.31
SHROOM3Q8TF72 MIR136-201ENST00000385207 82 ntBASIC0.63□□□□□ -2.31
SHROOM3Q8TF72 MIR92A1-201ENST00000385233 78 ntBASIC0.63□□□□□ -2.31
SHROOM3Q8TF72 RNU6-763P-201ENST00000390865 106 ntBASIC0.63□□□□□ -2.31
SHROOM3Q8TF72 MTCO2P33-201ENST00000402100 465 ntBASIC0.63□□□□□ -2.31
SHROOM3Q8TF72 MIR1298-201ENST00000408783 112 ntBASIC0.63□□□□□ -2.31
SHROOM3Q8TF72 AC024067.1-201ENST00000426199 223 ntBASIC0.63□□□□□ -2.31
SHROOM3Q8TF72 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.63□□□□□ -2.31
SHROOM3Q8TF72 RNU6-1338P-201ENST00000516328 91 ntBASIC0.63□□□□□ -2.31
SHROOM3Q8TF72 RNU7-116P-201ENST00000516940 62 ntBASIC0.63□□□□□ -2.31
SHROOM3Q8TF72 Y_RNA.711-201ENST00000516993 102 ntBASIC0.63□□□□□ -2.31
SHROOM3Q8TF72 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.63□□□□□ -2.31
SHROOM3Q8TF72 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.63□□□□□ -2.31
SHROOM3Q8TF72 AC022140.2-201ENST00000623500 188 ntBASIC0.63□□□□□ -2.31
SHROOM3Q8TF72 AC067863.3-201ENST00000624172 122 ntBASIC0.63□□□□□ -2.31
SHROOM3Q8TF72 SNORA25.3-201ENST00000363205 127 ntBASIC0.62□□□□□ -2.31
SHROOM3Q8TF72 Y_RNA.455-201ENST00000384230 98 ntBASIC0.62□□□□□ -2.31
SHROOM3Q8TF72 MIR1278-201ENST00000408753 81 ntBASIC0.62□□□□□ -2.31
SHROOM3Q8TF72 RNU2-70P-201ENST00000410718 179 ntBASIC0.62□□□□□ -2.31
SHROOM3Q8TF72 AC245047.8-201ENST00000456455 284 ntBASIC0.62□□□□□ -2.31
SHROOM3Q8TF72 RN7SKP164-201ENST00000516138 266 ntBASIC0.62□□□□□ -2.31
SHROOM3Q8TF72 RNU7-40P-201ENST00000516397 64 ntBASIC0.62□□□□□ -2.31
SHROOM3Q8TF72 RNU7-181P-201ENST00000517234 74 ntBASIC0.62□□□□□ -2.31
SHROOM3Q8TF72 RNU6-988P-201ENST00000519081 107 ntBASIC0.62□□□□□ -2.31
SHROOM3Q8TF72 MIR4724-201ENST00000579485 89 ntBASIC0.62□□□□□ -2.31
SHROOM3Q8TF72 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.62□□□□□ -2.31
SHROOM3Q8TF72 Y_RNA.105-201ENST00000363182 111 ntBASIC0.61□□□□□ -2.31
SHROOM3Q8TF72 Y_RNA.136-201ENST00000363444 102 ntBASIC0.61□□□□□ -2.31
SHROOM3Q8TF72 Y_RNA.370-201ENST00000365589 108 ntBASIC0.61□□□□□ -2.31
SHROOM3Q8TF72 SNORA2B-201ENST00000384583 137 ntBASIC0.61□□□□□ -2.31
SHROOM3Q8TF72 MIR522-201ENST00000385071 87 ntBASIC0.61□□□□□ -2.31
SHROOM3Q8TF72 ELOCP20-201ENST00000422460 345 ntBASIC0.61□□□□□ -2.31
SHROOM3Q8TF72 Y_RNA.721-201ENST00000517207 102 ntBASIC0.61□□□□□ -2.31
SHROOM3Q8TF72 AL008718.3-201ENST00000610217 321 ntBASIC0.61□□□□□ -2.31
SHROOM3Q8TF72 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.61□□□□□ -2.31
SHROOM3Q8TF72 Y_RNA.64-201ENST00000362845 102 ntBASIC0.61□□□□□ -2.31
SHROOM3Q8TF72 U8.7-201ENST00000364940 136 ntBASIC0.61□□□□□ -2.31
SHROOM3Q8TF72 AC117470.1-201ENST00000381974 330 ntBASIC0.61□□□□□ -2.31
SHROOM3Q8TF72 RNU6-1065P-201ENST00000384513 106 ntBASIC0.61□□□□□ -2.31
SHROOM3Q8TF72 MIR570-201ENST00000384917 97 ntBASIC0.61□□□□□ -2.31
SHROOM3Q8TF72 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.61□□□□□ -2.31
SHROOM3Q8TF72 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms