Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
PHTF2Q8N3S3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PHTF2Q8N3S3 RNU6-1131P-201ENST00000364955 107 ntBASIC3.09□□□□□ -1.91
PHTF2Q8N3S3 Y_RNA.558-201ENST00000384685 113 ntBASIC3.09□□□□□ -1.91
PHTF2Q8N3S3 MIR520A-201ENST00000384862 85 ntBASIC3.09□□□□□ -1.91
PHTF2Q8N3S3 MIR136-201ENST00000385207 82 ntBASIC3.09□□□□□ -1.91
PHTF2Q8N3S3 RNA5SP261-201ENST00000410536 106 ntBASIC3.09□□□□□ -1.91
PHTF2Q8N3S3 AL135938.1-201ENST00000443141 297 ntBASIC3.09□□□□□ -1.91
PHTF2Q8N3S3 DEFB131E-201ENST00000532329 154 ntBASIC3.09□□□□□ -1.91
PHTF2Q8N3S3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.09□□□□□ -1.91
PHTF2Q8N3S3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
PHTF2Q8N3S3 SNORD73B-201ENST00000364394 72 ntBASIC3.08□□□□□ -1.92
PHTF2Q8N3S3 Y_RNA.370-201ENST00000365589 108 ntBASIC3.08□□□□□ -1.92
PHTF2Q8N3S3 Y_RNA.531-201ENST00000384589 121 ntBASIC3.08□□□□□ -1.92
PHTF2Q8N3S3 RNU6-1067P-201ENST00000384752 107 ntBASIC3.08□□□□□ -1.92
PHTF2Q8N3S3 RNU6-1031P-201ENST00000384773 107 ntBASIC3.08□□□□□ -1.92
PHTF2Q8N3S3 MIR597-201ENST00000384968 97 ntBASIC3.08□□□□□ -1.92
PHTF2Q8N3S3 AC004812.1-201ENST00000540773 146 ntBASIC3.08□□□□□ -1.92
PHTF2Q8N3S3 MIR4513-201ENST00000581077 86 ntBASIC3.08□□□□□ -1.92
PHTF2Q8N3S3 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.08□□□□□ -1.92
PHTF2Q8N3S3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
PHTF2Q8N3S3 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
PHTF2Q8N3S3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PHTF2Q8N3S3 Y_RNA.10-201ENST00000362371 110 ntBASIC3.07□□□□□ -1.92
PHTF2Q8N3S3 HSPE1P9-201ENST00000440046 311 ntBASIC3.07□□□□□ -1.92
PHTF2Q8N3S3 RNU7-67P-201ENST00000459003 62 ntBASIC3.07□□□□□ -1.92
PHTF2Q8N3S3 RNA5SP385-201ENST00000515947 110 ntBASIC3.07□□□□□ -1.92
PHTF2Q8N3S3 RNA5SP356-201ENST00000515972 94 ntBASIC3.07□□□□□ -1.92
PHTF2Q8N3S3 RNU6-904P-201ENST00000516206 101 ntBASIC3.07□□□□□ -1.92
PHTF2Q8N3S3 RNU6-109P-201ENST00000516364 107 ntBASIC3.07□□□□□ -1.92
PHTF2Q8N3S3 RNU6-184P-201ENST00000516514 107 ntBASIC3.07□□□□□ -1.92
PHTF2Q8N3S3 RNU7-53P-201ENST00000516705 60 ntBASIC3.07□□□□□ -1.92
PHTF2Q8N3S3 RNU6-158P-201ENST00000517104 100 ntBASIC3.07□□□□□ -1.92
PHTF2Q8N3S3 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.07□□□□□ -1.92
PHTF2Q8N3S3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
PHTF2Q8N3S3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PHTF2Q8N3S3 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PHTF2Q8N3S3 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PHTF2Q8N3S3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
PHTF2Q8N3S3 Y_RNA.93-201ENST00000363066 109 ntBASIC3.06□□□□□ -1.92
PHTF2Q8N3S3 SNORA5B-201ENST00000363786 132 ntBASIC3.06□□□□□ -1.92
PHTF2Q8N3S3 SNORD56.5-201ENST00000364281 72 ntBASIC3.06□□□□□ -1.92
PHTF2Q8N3S3 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.06□□□□□ -1.92
PHTF2Q8N3S3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.06□□□□□ -1.92
PHTF2Q8N3S3 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.06□□□□□ -1.92
PHTF2Q8N3S3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.06□□□□□ -1.92
PHTF2Q8N3S3 MIR4298-201ENST00000584380 73 ntBASIC3.06□□□□□ -1.92
PHTF2Q8N3S3 AC006023.1-201ENST00000603944 259 ntBASIC3.06□□□□□ -1.92
PHTF2Q8N3S3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
PHTF2Q8N3S3 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.05□□□□□ -1.92
PHTF2Q8N3S3 RNU6-661P-201ENST00000362409 107 ntBASIC3.05□□□□□ -1.92
PHTF2Q8N3S3 AL512326.2-201ENST00000426359 151 ntBASIC3.05□□□□□ -1.92
PHTF2Q8N3S3 HMGN2P3-201ENST00000433603 273 ntBASIC3.05□□□□□ -1.92
PHTF2Q8N3S3 MTATP8P2-201ENST00000435212 202 ntBASIC3.05□□□□□ -1.92
PHTF2Q8N3S3 HMGN2P5-201ENST00000436882 273 ntBASIC3.05□□□□□ -1.92
PHTF2Q8N3S3 RNU7-113P-201ENST00000459273 62 ntBASIC3.05□□□□□ -1.92
PHTF2Q8N3S3 RPS23P4-201ENST00000487908 423 ntBASIC3.05□□□□□ -1.92
PHTF2Q8N3S3 RN7SL20P-201ENST00000488827 297 ntBASIC3.05□□□□□ -1.92
PHTF2Q8N3S3 RN7SKP132-201ENST00000516001 208 ntBASIC3.05□□□□□ -1.92
PHTF2Q8N3S3 RPPH1-2P-201ENST00000516688 293 ntBASIC3.05□□□□□ -1.92
PHTF2Q8N3S3 RNA5SP481-201ENST00000516814 122 ntBASIC3.05□□□□□ -1.92
PHTF2Q8N3S3 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.05□□□□□ -1.92
PHTF2Q8N3S3 RPL12P50-201ENST00000603116 116 ntBASIC3.05□□□□□ -1.92
PHTF2Q8N3S3 AC007318.2-201ENST00000620999 243 ntBASIC3.05□□□□□ -1.92
PHTF2Q8N3S3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PHTF2Q8N3S3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
PHTF2Q8N3S3 SNORA4.2-201ENST00000365313 147 ntBASIC3.04□□□□□ -1.92
PHTF2Q8N3S3 Y_RNA.494-201ENST00000384432 111 ntBASIC3.04□□□□□ -1.92
PHTF2Q8N3S3 RNU6-1319P-201ENST00000390855 104 ntBASIC3.04□□□□□ -1.92
PHTF2Q8N3S3 RNU6-747P-201ENST00000390928 104 ntBASIC3.04□□□□□ -1.92
PHTF2Q8N3S3 RNU6-241P-201ENST00000391148 104 ntBASIC3.04□□□□□ -1.92
PHTF2Q8N3S3 RN7SKP123-201ENST00000410732 291 ntBASIC3.04□□□□□ -1.92
PHTF2Q8N3S3 RNU6-177P-201ENST00000411257 104 ntBASIC3.04□□□□□ -1.92
PHTF2Q8N3S3 RNU7-34P-201ENST00000459394 64 ntBASIC3.04□□□□□ -1.92
PHTF2Q8N3S3 GTF3AP2-201ENST00000557014 266 ntBASIC3.04□□□□□ -1.92
PHTF2Q8N3S3 MIR4709-201ENST00000577272 72 ntBASIC3.04□□□□□ -1.92
PHTF2Q8N3S3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.04□□□□□ -1.92
PHTF2Q8N3S3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PHTF2Q8N3S3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PHTF2Q8N3S3 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
PHTF2Q8N3S3 Y_RNA.107-201ENST00000363190 121 ntBASIC3.03□□□□□ -1.92
PHTF2Q8N3S3 Y_RNA.155-201ENST00000363632 101 ntBASIC3.03□□□□□ -1.92
PHTF2Q8N3S3 MIR518A2-201ENST00000384966 87 ntBASIC3.03□□□□□ -1.92
PHTF2Q8N3S3 MIR516B2-201ENST00000385190 85 ntBASIC3.03□□□□□ -1.92
PHTF2Q8N3S3 SNORA26.2-201ENST00000390922 122 ntBASIC3.03□□□□□ -1.92
PHTF2Q8N3S3 AP004217.1-201ENST00000480579 346 ntBASIC3.03□□□□□ -1.92
PHTF2Q8N3S3 RNA5SP367-201ENST00000516557 118 ntBASIC3.03□□□□□ -1.92
PHTF2Q8N3S3 RNU6-958P-201ENST00000516995 106 ntBASIC3.03□□□□□ -1.92
PHTF2Q8N3S3 MIR4506-201ENST00000584693 77 ntBASIC3.03□□□□□ -1.92
PHTF2Q8N3S3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
PHTF2Q8N3S3 AC092881.1-201ENST00000638218 2733 ntBASIC3.03□□□□□ -1.92
PHTF2Q8N3S3 AC131280.1-202ENST00000624067 4211 ntBASIC3.03□□□□□ -1.92
PHTF2Q8N3S3 RNU1-51P-201ENST00000365345 176 ntBASIC3.02□□□□□ -1.93
PHTF2Q8N3S3 SNORD77B-201ENST00000391112 67 ntBASIC3.02□□□□□ -1.93
PHTF2Q8N3S3 SNORA19.1-201ENST00000410656 129 ntBASIC3.02□□□□□ -1.93
PHTF2Q8N3S3 RNU4-69P-201ENST00000410677 143 ntBASIC3.02□□□□□ -1.93
PHTF2Q8N3S3 RN7SKP192-201ENST00000411291 327 ntBASIC3.02□□□□□ -1.93
PHTF2Q8N3S3 SCARNA23-201ENST00000516060 130 ntBASIC3.02□□□□□ -1.93
PHTF2Q8N3S3 DNAJC19P9-201ENST00000555084 351 ntBASIC3.02□□□□□ -1.93
PHTF2Q8N3S3 MIR3162-201ENST00000581818 82 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 210.1 ms