Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 SUB1P4-201ENST00000566062 339 ntBASIC2.3□□□□□ -2.04
TRIM48Q8IWZ4 MIR5197-201ENST00000583721 112 ntBASIC2.3□□□□□ -2.04
TRIM48Q8IWZ4 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
TRIM48Q8IWZ4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
TRIM48Q8IWZ4 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
TRIM48Q8IWZ4 SNORD58C-201ENST00000365223 64 ntBASIC2.29□□□□□ -2.04
TRIM48Q8IWZ4 RNU6-476P-201ENST00000384726 107 ntBASIC2.29□□□□□ -2.04
TRIM48Q8IWZ4 Y_RNA.617-201ENST00000410920 90 ntBASIC2.29□□□□□ -2.04
TRIM48Q8IWZ4 RNU6-938P-201ENST00000411285 103 ntBASIC2.29□□□□□ -2.04
TRIM48Q8IWZ4 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.29□□□□□ -2.04
TRIM48Q8IWZ4 RN7SL429P-201ENST00000479090 223 ntBASIC2.29□□□□□ -2.04
TRIM48Q8IWZ4 RN7SL489P-201ENST00000486185 223 ntBASIC2.29□□□□□ -2.04
TRIM48Q8IWZ4 RN7SL327P-201ENST00000488659 223 ntBASIC2.29□□□□□ -2.04
TRIM48Q8IWZ4 CYCTP-201ENST00000504253 315 ntBASIC2.29□□□□□ -2.04
TRIM48Q8IWZ4 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.29□□□□□ -2.04
TRIM48Q8IWZ4 RN7SKP19-201ENST00000516016 252 ntBASIC2.29□□□□□ -2.04
TRIM48Q8IWZ4 RNU6-919P-201ENST00000516731 104 ntBASIC2.29□□□□□ -2.04
TRIM48Q8IWZ4 MIR4298-201ENST00000584380 73 ntBASIC2.29□□□□□ -2.04
TRIM48Q8IWZ4 RN7SL853P-201ENST00000617250 223 ntBASIC2.29□□□□□ -2.04
TRIM48Q8IWZ4 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
TRIM48Q8IWZ4 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
TRIM48Q8IWZ4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
TRIM48Q8IWZ4 RNU6-112P-201ENST00000363599 104 ntBASIC2.28□□□□□ -2.04
TRIM48Q8IWZ4 Y_RNA.410-201ENST00000383992 113 ntBASIC2.28□□□□□ -2.04
TRIM48Q8IWZ4 RNU6-1031P-201ENST00000384773 107 ntBASIC2.28□□□□□ -2.04
TRIM48Q8IWZ4 MIR520A-201ENST00000384862 85 ntBASIC2.28□□□□□ -2.04
TRIM48Q8IWZ4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
TRIM48Q8IWZ4 MIR1263-201ENST00000408324 86 ntBASIC2.28□□□□□ -2.04
TRIM48Q8IWZ4 HMGN2P32-201ENST00000444648 269 ntBASIC2.28□□□□□ -2.04
TRIM48Q8IWZ4 AC093850.1-201ENST00000454121 251 ntBASIC2.28□□□□□ -2.04
TRIM48Q8IWZ4 RNU7-34P-201ENST00000459394 64 ntBASIC2.28□□□□□ -2.04
TRIM48Q8IWZ4 RNU7-12P-201ENST00000516030 62 ntBASIC2.28□□□□□ -2.04
TRIM48Q8IWZ4 SCARNA16.3-201ENST00000516595 184 ntBASIC2.28□□□□□ -2.04
TRIM48Q8IWZ4 RNU7-193P-201ENST00000516723 65 ntBASIC2.28□□□□□ -2.04
TRIM48Q8IWZ4 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
TRIM48Q8IWZ4 AC067747.1-201ENST00000608026 250 ntBASIC2.28□□□□□ -2.04
TRIM48Q8IWZ4 MIR6873-201ENST00000622788 63 ntBASIC2.28□□□□□ -2.04
TRIM48Q8IWZ4 AC016717.2-201ENST00000609089 5141 ntBASIC2.27□□□□□ -2.05
TRIM48Q8IWZ4 RNU6-834P-201ENST00000362367 110 ntBASIC2.27□□□□□ -2.05
TRIM48Q8IWZ4 U8.2-201ENST00000363156 134 ntBASIC2.27□□□□□ -2.05
TRIM48Q8IWZ4 RNU1-52P-201ENST00000384190 164 ntBASIC2.27□□□□□ -2.05
TRIM48Q8IWZ4 RNU6-1144P-201ENST00000384247 104 ntBASIC2.27□□□□□ -2.05
TRIM48Q8IWZ4 RNU6-424P-201ENST00000384367 105 ntBASIC2.27□□□□□ -2.05
TRIM48Q8IWZ4 RNU6-296P-201ENST00000384608 107 ntBASIC2.27□□□□□ -2.05
TRIM48Q8IWZ4 RNA5SP425-201ENST00000410336 112 ntBASIC2.27□□□□□ -2.05
TRIM48Q8IWZ4 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.27□□□□□ -2.05
TRIM48Q8IWZ4 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.27□□□□□ -2.05
TRIM48Q8IWZ4 AC002984.1-201ENST00000591692 448 ntBASIC2.27□□□□□ -2.05
TRIM48Q8IWZ4 AC005336.3-201ENST00000623833 2679 ntBASIC2.27□□□□□ -2.05
TRIM48Q8IWZ4 SNORA70B-201ENST00000384210 135 ntBASIC2.26□□□□□ -2.05
TRIM48Q8IWZ4 SNORD38C-201ENST00000384381 69 ntBASIC2.26□□□□□ -2.05
TRIM48Q8IWZ4 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.26□□□□□ -2.05
TRIM48Q8IWZ4 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.26□□□□□ -2.05
TRIM48Q8IWZ4 AC007064.1-201ENST00000412238 351 ntBASIC2.26□□□□□ -2.05
TRIM48Q8IWZ4 AC015922.2-201ENST00000435593 184 ntBASIC2.26□□□□□ -2.05
TRIM48Q8IWZ4 SNORA18.7-201ENST00000516910 131 ntBASIC2.26□□□□□ -2.05
TRIM48Q8IWZ4 AP003484.1-201ENST00000530974 250 ntBASIC2.26□□□□□ -2.05
TRIM48Q8IWZ4 AC027279.3-201ENST00000625055 122 ntBASIC2.26□□□□□ -2.05
TRIM48Q8IWZ4 U6.95-201ENST00000636931 70 ntBASIC2.26□□□□□ -2.05
TRIM48Q8IWZ4 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.26□□□□□ -2.05
TRIM48Q8IWZ4 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.26□□□□□ -2.05
TRIM48Q8IWZ4 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
TRIM48Q8IWZ4 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
TRIM48Q8IWZ4 ZNF658B-202ENST00000615961 3375 ntBASIC2.25□□□□□ -2.05
TRIM48Q8IWZ4 MIR342-201ENST00000362212 99 ntBASIC2.25□□□□□ -2.05
TRIM48Q8IWZ4 RNA5SP393-201ENST00000363423 117 ntBASIC2.25□□□□□ -2.05
TRIM48Q8IWZ4 Y_RNA.366-201ENST00000365540 102 ntBASIC2.25□□□□□ -2.05
TRIM48Q8IWZ4 RNU6-950P-201ENST00000384651 107 ntBASIC2.25□□□□□ -2.05
TRIM48Q8IWZ4 MIR516B2-201ENST00000385190 85 ntBASIC2.25□□□□□ -2.05
TRIM48Q8IWZ4 SNORA3.2-201ENST00000408221 125 ntBASIC2.25□□□□□ -2.05
TRIM48Q8IWZ4 RNA5SP450-201ENST00000411206 102 ntBASIC2.25□□□□□ -2.05
TRIM48Q8IWZ4 Z98742.3-201ENST00000418637 326 ntBASIC2.25□□□□□ -2.05
TRIM48Q8IWZ4 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.25□□□□□ -2.05
TRIM48Q8IWZ4 AL356320.1-201ENST00000429616 163 ntBASIC2.25□□□□□ -2.05
TRIM48Q8IWZ4 RNU6-240P-201ENST00000516098 97 ntBASIC2.25□□□□□ -2.05
TRIM48Q8IWZ4 SNORA31.25-201ENST00000517242 134 ntBASIC2.25□□□□□ -2.05
TRIM48Q8IWZ4 AC025166.1-201ENST00000612411 163 ntBASIC2.25□□□□□ -2.05
TRIM48Q8IWZ4 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
TRIM48Q8IWZ4 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
TRIM48Q8IWZ4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
TRIM48Q8IWZ4 AC007336.1-201ENST00000576365 3828 ntBASIC2.24□□□□□ -2.05
TRIM48Q8IWZ4 SNORA63.4-201ENST00000362763 126 ntBASIC2.24□□□□□ -2.05
TRIM48Q8IWZ4 RNU1-51P-201ENST00000365345 176 ntBASIC2.24□□□□□ -2.05
TRIM48Q8IWZ4 Y_RNA.440-201ENST00000384120 114 ntBASIC2.24□□□□□ -2.05
TRIM48Q8IWZ4 RN7SKP192-201ENST00000411291 327 ntBASIC2.24□□□□□ -2.05
TRIM48Q8IWZ4 RNU7-181P-201ENST00000517234 74 ntBASIC2.24□□□□□ -2.05
TRIM48Q8IWZ4 MIR4709-201ENST00000577272 72 ntBASIC2.24□□□□□ -2.05
TRIM48Q8IWZ4 AC021506.2-201ENST00000612354 169 ntBASIC2.24□□□□□ -2.05
TRIM48Q8IWZ4 Y_RNA.351-201ENST00000365436 96 ntBASIC2.23□□□□□ -2.05
TRIM48Q8IWZ4 Y_RNA.494-201ENST00000384432 111 ntBASIC2.23□□□□□ -2.05
TRIM48Q8IWZ4 MIR548A1-201ENST00000385041 97 ntBASIC2.23□□□□□ -2.05
TRIM48Q8IWZ4 MIR548A3-201ENST00000385297 97 ntBASIC2.23□□□□□ -2.05
TRIM48Q8IWZ4 SNX2P2-201ENST00000424553 323 ntBASIC2.23□□□□□ -2.05
TRIM48Q8IWZ4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.23□□□□□ -2.05
TRIM48Q8IWZ4 MIR4778-201ENST00000577635 80 ntBASIC2.23□□□□□ -2.05
TRIM48Q8IWZ4 MIR5007-201ENST00000583098 95 ntBASIC2.23□□□□□ -2.05
TRIM48Q8IWZ4 AL121890.5-201ENST00000620848 304 ntBASIC2.23□□□□□ -2.05
TRIM48Q8IWZ4 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.23□□□□□ -2.05
TRIM48Q8IWZ4 MTND5P18-201ENST00000445624 1801 ntBASIC2.23□□□□□ -2.05
TRIM48Q8IWZ4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms