Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 Y_RNA.611-201ENST00000410682 108 ntBASIC3.17□□□□□ -1.9
LYSMD3Q7Z3D4 RNU6-177P-201ENST00000411257 104 ntBASIC3.17□□□□□ -1.9
LYSMD3Q7Z3D4 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.17□□□□□ -1.9
LYSMD3Q7Z3D4 AC073261.1-201ENST00000429409 121 ntBASIC3.17□□□□□ -1.9
LYSMD3Q7Z3D4 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.17□□□□□ -1.9
LYSMD3Q7Z3D4 STAG3L5P-204ENST00000443759 179 ntBASIC3.17□□□□□ -1.9
LYSMD3Q7Z3D4 RNA5SP33-201ENST00000516687 98 ntBASIC3.17□□□□□ -1.9
LYSMD3Q7Z3D4 AC096720.1-201ENST00000604441 183 ntBASIC3.17□□□□□ -1.9
LYSMD3Q7Z3D4 AC103810.6-201ENST00000606708 136 ntBASIC3.17□□□□□ -1.9
LYSMD3Q7Z3D4 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.17□□□□□ -1.9
LYSMD3Q7Z3D4 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LYSMD3Q7Z3D4 AC096644.4-201ENST00000563417 2912 ntBASIC3.16□□□□□ -1.9
LYSMD3Q7Z3D4 MAPK10-362ENST00000641864 4484 ntBASIC3.16□□□□□ -1.9
LYSMD3Q7Z3D4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LYSMD3Q7Z3D4 MIRLET7C-201ENST00000362160 84 ntBASIC3.16□□□□□ -1.9
LYSMD3Q7Z3D4 RNU6-1313P-201ENST00000362622 102 ntBASIC3.16□□□□□ -1.9
LYSMD3Q7Z3D4 RNU6-652P-201ENST00000365488 107 ntBASIC3.16□□□□□ -1.9
LYSMD3Q7Z3D4 U8.15-201ENST00000390947 134 ntBASIC3.16□□□□□ -1.9
LYSMD3Q7Z3D4 SNORA11.2-201ENST00000408318 127 ntBASIC3.16□□□□□ -1.9
LYSMD3Q7Z3D4 MIR1267-201ENST00000408723 78 ntBASIC3.16□□□□□ -1.9
LYSMD3Q7Z3D4 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.16□□□□□ -1.9
LYSMD3Q7Z3D4 SNORA59A-201ENST00000459326 152 ntBASIC3.16□□□□□ -1.9
LYSMD3Q7Z3D4 AC007536.1-201ENST00000533382 349 ntBASIC3.16□□□□□ -1.9
LYSMD3Q7Z3D4 MIR4439-201ENST00000583746 80 ntBASIC3.16□□□□□ -1.9
LYSMD3Q7Z3D4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LYSMD3Q7Z3D4 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.16□□□□□ -1.9
LYSMD3Q7Z3D4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
LYSMD3Q7Z3D4 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
LYSMD3Q7Z3D4 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.15□□□□□ -1.9
LYSMD3Q7Z3D4 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
LYSMD3Q7Z3D4 Y_RNA.191-201ENST00000363972 113 ntBASIC3.15□□□□□ -1.91
LYSMD3Q7Z3D4 SNORA25B-201ENST00000365507 128 ntBASIC3.15□□□□□ -1.91
LYSMD3Q7Z3D4 RNU6-424P-201ENST00000384367 105 ntBASIC3.15□□□□□ -1.91
LYSMD3Q7Z3D4 MIR1262-201ENST00000408276 93 ntBASIC3.15□□□□□ -1.91
LYSMD3Q7Z3D4 AC015922.2-201ENST00000435593 184 ntBASIC3.15□□□□□ -1.91
LYSMD3Q7Z3D4 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.15□□□□□ -1.91
LYSMD3Q7Z3D4 RN7SL75P-201ENST00000461926 281 ntBASIC3.15□□□□□ -1.91
LYSMD3Q7Z3D4 UBL5P3-201ENST00000475112 231 ntBASIC3.15□□□□□ -1.91
LYSMD3Q7Z3D4 UBL5P2-201ENST00000583788 219 ntBASIC3.15□□□□□ -1.91
LYSMD3Q7Z3D4 ELOCP29-201ENST00000588193 334 ntBASIC3.15□□□□□ -1.91
LYSMD3Q7Z3D4 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.15□□□□□ -1.91
LYSMD3Q7Z3D4 AL442644.1-201ENST00000454390 3105 ntBASIC3.15□□□□□ -1.91
LYSMD3Q7Z3D4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LYSMD3Q7Z3D4 SNORA22.1-201ENST00000362701 134 ntBASIC3.14□□□□□ -1.91
LYSMD3Q7Z3D4 RNA5SP374-201ENST00000362939 125 ntBASIC3.14□□□□□ -1.91
LYSMD3Q7Z3D4 SNORA1.1-201ENST00000364671 133 ntBASIC3.14□□□□□ -1.91
LYSMD3Q7Z3D4 SNORA7.4-201ENST00000384249 137 ntBASIC3.14□□□□□ -1.91
LYSMD3Q7Z3D4 RPL32P35-201ENST00000415214 394 ntBASIC3.14□□□□□ -1.91
LYSMD3Q7Z3D4 AC139453.2-201ENST00000487255 133 ntBASIC3.14□□□□□ -1.91
LYSMD3Q7Z3D4 RNA5SP217-201ENST00000515959 91 ntBASIC3.14□□□□□ -1.91
LYSMD3Q7Z3D4 RPPH1-2P-201ENST00000516688 293 ntBASIC3.14□□□□□ -1.91
LYSMD3Q7Z3D4 AL162274.2-201ENST00000614406 332 ntBASIC3.14□□□□□ -1.91
LYSMD3Q7Z3D4 MIR8054-201ENST00000620877 86 ntBASIC3.14□□□□□ -1.91
LYSMD3Q7Z3D4 AC027279.3-201ENST00000625055 122 ntBASIC3.14□□□□□ -1.91
LYSMD3Q7Z3D4 MIR548BB-201ENST00000626714 66 ntBASIC3.14□□□□□ -1.91
LYSMD3Q7Z3D4 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LYSMD3Q7Z3D4 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LYSMD3Q7Z3D4 RNA5SP493-201ENST00000364115 91 ntBASIC3.13□□□□□ -1.91
LYSMD3Q7Z3D4 Y_RNA.430-201ENST00000384081 110 ntBASIC3.13□□□□□ -1.91
LYSMD3Q7Z3D4 RN7SKP192-201ENST00000411291 327 ntBASIC3.13□□□□□ -1.91
LYSMD3Q7Z3D4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC3.13□□□□□ -1.91
LYSMD3Q7Z3D4 S100A11P2-201ENST00000467589 312 ntBASIC3.13□□□□□ -1.91
LYSMD3Q7Z3D4 AC108729.3-201ENST00000513484 108 ntBASIC3.13□□□□□ -1.91
LYSMD3Q7Z3D4 RNA5SP385-201ENST00000515947 110 ntBASIC3.13□□□□□ -1.91
LYSMD3Q7Z3D4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.13□□□□□ -1.91
LYSMD3Q7Z3D4 MIR3152-201ENST00000579801 74 ntBASIC3.13□□□□□ -1.91
LYSMD3Q7Z3D4 MIR376B-201ENST00000614515 100 ntBASIC3.13□□□□□ -1.91
LYSMD3Q7Z3D4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
LYSMD3Q7Z3D4 MIR6841-201ENST00000637129 72 ntBASIC3.13□□□□□ -1.91
LYSMD3Q7Z3D4 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LYSMD3Q7Z3D4 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
LYSMD3Q7Z3D4 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.12□□□□□ -1.91
LYSMD3Q7Z3D4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
LYSMD3Q7Z3D4 RNU6-220P-201ENST00000390919 107 ntBASIC3.12□□□□□ -1.91
LYSMD3Q7Z3D4 RN7SKP123-201ENST00000410732 291 ntBASIC3.12□□□□□ -1.91
LYSMD3Q7Z3D4 AL049873.1-201ENST00000480540 376 ntBASIC3.12□□□□□ -1.91
LYSMD3Q7Z3D4 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.12□□□□□ -1.91
LYSMD3Q7Z3D4 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.12□□□□□ -1.91
LYSMD3Q7Z3D4 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.12□□□□□ -1.91
LYSMD3Q7Z3D4 MIR4506-201ENST00000584693 77 ntBASIC3.12□□□□□ -1.91
LYSMD3Q7Z3D4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.12□□□□□ -1.91
LYSMD3Q7Z3D4 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.12□□□□□ -1.91
LYSMD3Q7Z3D4 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
LYSMD3Q7Z3D4 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
LYSMD3Q7Z3D4 RNU6-509P-201ENST00000363519 107 ntBASIC3.11□□□□□ -1.91
LYSMD3Q7Z3D4 SNORD67-201ENST00000390833 111 ntBASIC3.11□□□□□ -1.91
LYSMD3Q7Z3D4 AC090844.1-201ENST00000422019 156 ntBASIC3.11□□□□□ -1.91
LYSMD3Q7Z3D4 AC003685.2-201ENST00000422795 395 ntBASIC3.11□□□□□ -1.91
LYSMD3Q7Z3D4 RNU7-34P-201ENST00000459394 64 ntBASIC3.11□□□□□ -1.91
LYSMD3Q7Z3D4 SNORA28-201ENST00000606769 126 ntBASIC3.11□□□□□ -1.91
LYSMD3Q7Z3D4 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.1□□□□□ -1.91
LYSMD3Q7Z3D4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LYSMD3Q7Z3D4 Y_RNA.247-201ENST00000364500 92 ntBASIC3.1□□□□□ -1.91
LYSMD3Q7Z3D4 SNORD15B-201ENST00000384714 146 ntBASIC3.1□□□□□ -1.91
LYSMD3Q7Z3D4 RNU1-101P-201ENST00000391171 127 ntBASIC3.1□□□□□ -1.91
LYSMD3Q7Z3D4 SNORA26.6-201ENST00000391256 115 ntBASIC3.1□□□□□ -1.91
LYSMD3Q7Z3D4 SNORA26.7-201ENST00000391288 122 ntBASIC3.1□□□□□ -1.91
LYSMD3Q7Z3D4 Y_RNA.607-201ENST00000410597 98 ntBASIC3.1□□□□□ -1.91
LYSMD3Q7Z3D4 RNA5SP341-201ENST00000516261 117 ntBASIC3.1□□□□□ -1.91
LYSMD3Q7Z3D4 MIR3169-201ENST00000578032 83 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms