Protein–RNA interactions for Protein: Q70EL1

USP54, Inactive ubiquitin carboxyl-terminal hydrolase 54, humanhuman

Predictions only

Length 1,684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP54Q70EL1 SNORA22B-201ENST00000383876 138 ntBASIC-0.9□□□□□ -2.55
USP54Q70EL1 SNORD37.1-201ENST00000390968 65 ntBASIC-0.9□□□□□ -2.55
USP54Q70EL1 RNU6-1001P-201ENST00000411265 100 ntBASIC-0.9□□□□□ -2.55
USP54Q70EL1 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.9□□□□□ -2.55
USP54Q70EL1 RPL30P15-201ENST00000457129 321 ntBASIC-0.9□□□□□ -2.55
USP54Q70EL1 RNU6-261P-201ENST00000459506 102 ntBASIC-0.9□□□□□ -2.55
USP54Q70EL1 RPL7P42-201ENST00000481005 679 ntBASIC-0.9□□□□□ -2.55
USP54Q70EL1 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-0.9□□□□□ -2.55
USP54Q70EL1 MIR378D2-201ENST00000580636 98 ntBASIC-0.9□□□□□ -2.55
USP54Q70EL1 AC109347.2-201ENST00000610220 349 ntBASIC-0.9□□□□□ -2.55
USP54Q70EL1 AC073869.9-201ENST00000641610 120 ntBASIC-0.9□□□□□ -2.55
USP54Q70EL1 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.91□□□□□ -2.55
USP54Q70EL1 RNU6-811P-201ENST00000384069 107 ntBASIC-0.91□□□□□ -2.55
USP54Q70EL1 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.91□□□□□ -2.55
USP54Q70EL1 RNU6-297P-201ENST00000384636 107 ntBASIC-0.91□□□□□ -2.55
USP54Q70EL1 MTATP6P13-201ENST00000438531 667 ntBASIC-0.91□□□□□ -2.55
USP54Q70EL1 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.91□□□□□ -2.55
USP54Q70EL1 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.91□□□□□ -2.55
USP54Q70EL1 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.91□□□□□ -2.55
USP54Q70EL1 RNU6-765P-201ENST00000516916 99 ntBASIC-0.91□□□□□ -2.55
USP54Q70EL1 RNU6-897P-201ENST00000517135 105 ntBASIC-0.91□□□□□ -2.55
USP54Q70EL1 MTCO2P4-201ENST00000517968 247 ntBASIC-0.91□□□□□ -2.55
USP54Q70EL1 AL118558.2-201ENST00000556294 238 ntBASIC-0.91□□□□□ -2.55
USP54Q70EL1 MIR3913-1-201ENST00000577744 102 ntBASIC-0.91□□□□□ -2.55
USP54Q70EL1 AC245884.10-201ENST00000597355 337 ntBASIC-0.91□□□□□ -2.55
USP54Q70EL1 AL133255.1-201ENST00000606374 441 ntBASIC-0.91□□□□□ -2.55
USP54Q70EL1 DLEU2_5.1-201ENST00000615567 84 ntBASIC-0.91□□□□□ -2.55
USP54Q70EL1 MIR8066-201ENST00000617280 78 ntBASIC-0.91□□□□□ -2.55
USP54Q70EL1 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.91□□□□□ -2.56
USP54Q70EL1 RNU6-596P-201ENST00000365395 98 ntBASIC-0.91□□□□□ -2.56
USP54Q70EL1 MIR548L-201ENST00000408303 86 ntBASIC-0.91□□□□□ -2.56
USP54Q70EL1 SPINT5P-201ENST00000448174 155 ntBASIC-0.91□□□□□ -2.56
USP54Q70EL1 AL009048.1-201ENST00000450437 298 ntBASIC-0.91□□□□□ -2.56
USP54Q70EL1 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.91□□□□□ -2.56
USP54Q70EL1 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.91□□□□□ -2.56
USP54Q70EL1 Y_RNA.106-201ENST00000363189 100 ntBASIC-0.92□□□□□ -2.56
USP54Q70EL1 RNU6-1323P-201ENST00000384025 107 ntBASIC-0.92□□□□□ -2.56
USP54Q70EL1 SNORD12C-201ENST00000386307 89 ntBASIC-0.92□□□□□ -2.56
USP54Q70EL1 SNORD83B-201ENST00000386745 93 ntBASIC-0.92□□□□□ -2.56
USP54Q70EL1 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.92□□□□□ -2.56
USP54Q70EL1 AC124303.1-201ENST00000605703 360 ntBASIC-0.92□□□□□ -2.56
USP54Q70EL1 MIR6507-201ENST00000613630 70 ntBASIC-0.92□□□□□ -2.56
USP54Q70EL1 SNORD115-34-201ENST00000362441 82 ntBASIC-0.93□□□□□ -2.56
USP54Q70EL1 SNORD115-12-201ENST00000362583 82 ntBASIC-0.93□□□□□ -2.56
USP54Q70EL1 SNORD115-29-201ENST00000362834 82 ntBASIC-0.93□□□□□ -2.56
USP54Q70EL1 SNORD115-9-201ENST00000362912 82 ntBASIC-0.93□□□□□ -2.56
USP54Q70EL1 SNORD115-21-201ENST00000362963 81 ntBASIC-0.93□□□□□ -2.56
USP54Q70EL1 SNORD115-14-201ENST00000363090 81 ntBASIC-0.93□□□□□ -2.56
USP54Q70EL1 SNORD115-13-201ENST00000363358 82 ntBASIC-0.93□□□□□ -2.56
USP54Q70EL1 SNORD115-11-201ENST00000363616 82 ntBASIC-0.93□□□□□ -2.56
USP54Q70EL1 SNORD115-5-201ENST00000363633 82 ntBASIC-0.93□□□□□ -2.56
USP54Q70EL1 SNORD115-39-201ENST00000363694 82 ntBASIC-0.93□□□□□ -2.56
USP54Q70EL1 SNORD114-11-201ENST00000363738 75 ntBASIC-0.93□□□□□ -2.56
USP54Q70EL1 SNORD115-4-201ENST00000363810 82 ntBASIC-0.93□□□□□ -2.56
USP54Q70EL1 SNORD115-16-201ENST00000363887 82 ntBASIC-0.93□□□□□ -2.56
USP54Q70EL1 SNORD115-6-201ENST00000363942 82 ntBASIC-0.93□□□□□ -2.56
USP54Q70EL1 SNORD115-42-201ENST00000364273 82 ntBASIC-0.93□□□□□ -2.56
USP54Q70EL1 SNORD115-15-201ENST00000364809 81 ntBASIC-0.93□□□□□ -2.56
USP54Q70EL1 SNORD115-1-201ENST00000364961 82 ntBASIC-0.93□□□□□ -2.56
USP54Q70EL1 SNORD115-26-201ENST00000365067 82 ntBASIC-0.93□□□□□ -2.56
USP54Q70EL1 SNORD115-10-201ENST00000365073 81 ntBASIC-0.93□□□□□ -2.56
USP54Q70EL1 SNORD115-43-201ENST00000365503 82 ntBASIC-0.93□□□□□ -2.56
USP54Q70EL1 SNORD115-36-201ENST00000365629 82 ntBASIC-0.93□□□□□ -2.56
USP54Q70EL1 MIR516B1-201ENST00000385211 90 ntBASIC-0.93□□□□□ -2.56
USP54Q70EL1 AC010424.1-201ENST00000506336 297 ntBASIC-0.93□□□□□ -2.56
USP54Q70EL1 RNU6-436P-201ENST00000516171 114 ntBASIC-0.93□□□□□ -2.56
USP54Q70EL1 AC008507.4-201ENST00000585464 127 ntBASIC-0.93□□□□□ -2.56
USP54Q70EL1 SNORD115-40-201ENST00000606510 82 ntBASIC-0.93□□□□□ -2.56
USP54Q70EL1 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.93□□□□□ -2.56
USP54Q70EL1 SNORD115-30-201ENST00000364117 82 ntBASIC-0.94□□□□□ -2.56
USP54Q70EL1 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.94□□□□□ -2.56
USP54Q70EL1 RNU5A-2P-201ENST00000384337 116 ntBASIC-0.94□□□□□ -2.56
USP54Q70EL1 MIR513B-201ENST00000385136 84 ntBASIC-0.94□□□□□ -2.56
USP54Q70EL1 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-0.94□□□□□ -2.56
USP54Q70EL1 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.94□□□□□ -2.56
USP54Q70EL1 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-0.94□□□□□ -2.56
USP54Q70EL1 AL590491.3-201ENST00000610731 82 ntBASIC-0.94□□□□□ -2.56
USP54Q70EL1 RNU6-10P-201ENST00000384036 107 ntBASIC-0.94□□□□□ -2.56
USP54Q70EL1 Y_RNA.557-201ENST00000384680 107 ntBASIC-0.94□□□□□ -2.56
USP54Q70EL1 AL031003.1-201ENST00000404229 172 ntBASIC-0.94□□□□□ -2.56
USP54Q70EL1 RNU6-710P-201ENST00000410424 105 ntBASIC-0.94□□□□□ -2.56
USP54Q70EL1 RNU2-61P-201ENST00000411069 191 ntBASIC-0.94□□□□□ -2.56
USP54Q70EL1 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-0.94□□□□□ -2.56
USP54Q70EL1 MIR148A-201ENST00000362215 68 ntBASIC-0.95□□□□□ -2.56
USP54Q70EL1 RNU6-509P-201ENST00000363519 107 ntBASIC-0.95□□□□□ -2.56
USP54Q70EL1 RNU6-879P-201ENST00000364328 108 ntBASIC-0.95□□□□□ -2.56
USP54Q70EL1 Y_RNA.241-201ENST00000364470 117 ntBASIC-0.95□□□□□ -2.56
USP54Q70EL1 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.95□□□□□ -2.56
USP54Q70EL1 AC083904.1-201ENST00000487828 231 ntBASIC-0.95□□□□□ -2.56
USP54Q70EL1 UBE2V1P12-201ENST00000503954 474 ntBASIC-0.95□□□□□ -2.56
USP54Q70EL1 RNU6-311P-201ENST00000516224 102 ntBASIC-0.95□□□□□ -2.56
USP54Q70EL1 RNU6-89P-201ENST00000606519 100 ntBASIC-0.95□□□□□ -2.56
USP54Q70EL1 SNORA70.25-201ENST00000612741 95 ntBASIC-0.95□□□□□ -2.56
USP54Q70EL1 SNORD114-14-201ENST00000362723 75 ntBASIC-0.96□□□□□ -2.56
USP54Q70EL1 RNU6-1209P-201ENST00000363655 107 ntBASIC-0.96□□□□□ -2.56
USP54Q70EL1 SNORA72.3-201ENST00000365074 132 ntBASIC-0.96□□□□□ -2.56
USP54Q70EL1 Y_RNA.341-201ENST00000365341 102 ntBASIC-0.96□□□□□ -2.56
USP54Q70EL1 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-0.96□□□□□ -2.56
USP54Q70EL1 SNORA40.9-201ENST00000515895 93 ntBASIC-0.96□□□□□ -2.56
USP54Q70EL1 RNU6-408P-201ENST00000515910 100 ntBASIC-0.96□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 212 ms