Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 AC093850.1-201ENST00000454121 251 ntBASIC1.59□□□□□ -2.15
SYNE3Q6ZMZ3 AC108729.3-201ENST00000513484 108 ntBASIC1.59□□□□□ -2.15
SYNE3Q6ZMZ3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.59□□□□□ -2.15
SYNE3Q6ZMZ3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.59□□□□□ -2.15
SYNE3Q6ZMZ3 AC006441.5-201ENST00000612680 209 ntBASIC1.59□□□□□ -2.15
SYNE3Q6ZMZ3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
SYNE3Q6ZMZ3 RNU6-442P-201ENST00000383968 104 ntBASIC1.58□□□□□ -2.16
SYNE3Q6ZMZ3 MIR616-201ENST00000385293 97 ntBASIC1.58□□□□□ -2.16
SYNE3Q6ZMZ3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.58□□□□□ -2.16
SYNE3Q6ZMZ3 MIR1298-201ENST00000408783 112 ntBASIC1.58□□□□□ -2.16
SYNE3Q6ZMZ3 MLLT10P1-201ENST00000418346 262 ntBASIC1.58□□□□□ -2.16
SYNE3Q6ZMZ3 AC009474.2-201ENST00000451383 136 ntBASIC1.58□□□□□ -2.16
SYNE3Q6ZMZ3 RNU7-95P-201ENST00000459222 64 ntBASIC1.58□□□□□ -2.16
SYNE3Q6ZMZ3 AL160236.1-201ENST00000556317 195 ntBASIC1.58□□□□□ -2.16
SYNE3Q6ZMZ3 AC009779.6-201ENST00000603972 165 ntBASIC1.58□□□□□ -2.16
SYNE3Q6ZMZ3 MIR7974-201ENST00000615835 79 ntBASIC1.58□□□□□ -2.16
SYNE3Q6ZMZ3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.58□□□□□ -2.16
SYNE3Q6ZMZ3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
SYNE3Q6ZMZ3 Y_RNA.24-201ENST00000362508 103 ntBASIC1.57□□□□□ -2.16
SYNE3Q6ZMZ3 Y_RNA.188-201ENST00000363952 111 ntBASIC1.57□□□□□ -2.16
SYNE3Q6ZMZ3 SNORD14E-201ENST00000364009 85 ntBASIC1.57□□□□□ -2.16
SYNE3Q6ZMZ3 snoU2_19.4-201ENST00000364329 80 ntBASIC1.57□□□□□ -2.16
SYNE3Q6ZMZ3 Y_RNA.572-201ENST00000384757 98 ntBASIC1.57□□□□□ -2.16
SYNE3Q6ZMZ3 SNORD72-201ENST00000390994 80 ntBASIC1.57□□□□□ -2.16
SYNE3Q6ZMZ3 AP1B1P2-201ENST00000416196 106 ntBASIC1.57□□□□□ -2.16
SYNE3Q6ZMZ3 BTF3P4-201ENST00000418852 495 ntBASIC1.57□□□□□ -2.16
SYNE3Q6ZMZ3 SNX2P2-201ENST00000424553 323 ntBASIC1.57□□□□□ -2.16
SYNE3Q6ZMZ3 RN7SKP164-201ENST00000516138 266 ntBASIC1.57□□□□□ -2.16
SYNE3Q6ZMZ3 RNU6-830P-201ENST00000516353 107 ntBASIC1.57□□□□□ -2.16
SYNE3Q6ZMZ3 AC090142.3-201ENST00000519012 385 ntBASIC1.57□□□□□ -2.16
SYNE3Q6ZMZ3 MIR4662B-201ENST00000579498 81 ntBASIC1.57□□□□□ -2.16
SYNE3Q6ZMZ3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.57□□□□□ -2.16
SYNE3Q6ZMZ3 MIR378A-201ENST00000362177 66 ntBASIC1.56□□□□□ -2.16
SYNE3Q6ZMZ3 RNU6-1084P-201ENST00000362498 107 ntBASIC1.56□□□□□ -2.16
SYNE3Q6ZMZ3 RNU6-1065P-201ENST00000384513 106 ntBASIC1.56□□□□□ -2.16
SYNE3Q6ZMZ3 MIR15B-201ENST00000385045 98 ntBASIC1.56□□□□□ -2.16
SYNE3Q6ZMZ3 MIR150-201ENST00000385048 84 ntBASIC1.56□□□□□ -2.16
SYNE3Q6ZMZ3 RNU2-55P-201ENST00000411146 174 ntBASIC1.56□□□□□ -2.16
SYNE3Q6ZMZ3 Y_RNA.626-201ENST00000411288 95 ntBASIC1.56□□□□□ -2.16
SYNE3Q6ZMZ3 RPL30P7-201ENST00000479312 323 ntBASIC1.56□□□□□ -2.16
SYNE3Q6ZMZ3 RNU6-126P-201ENST00000516685 103 ntBASIC1.56□□□□□ -2.16
SYNE3Q6ZMZ3 RNU7-149P-201ENST00000516739 59 ntBASIC1.56□□□□□ -2.16
SYNE3Q6ZMZ3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SYNE3Q6ZMZ3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.56□□□□□ -2.16
SYNE3Q6ZMZ3 MIR4421-201ENST00000578133 69 ntBASIC1.56□□□□□ -2.16
SYNE3Q6ZMZ3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.56□□□□□ -2.16
SYNE3Q6ZMZ3 RNU6-379P-201ENST00000363813 104 ntBASIC1.55□□□□□ -2.16
SYNE3Q6ZMZ3 RNU6-268P-201ENST00000364174 107 ntBASIC1.55□□□□□ -2.16
SYNE3Q6ZMZ3 RNU6-484P-201ENST00000384016 107 ntBASIC1.55□□□□□ -2.16
SYNE3Q6ZMZ3 MIR758-201ENST00000390227 88 ntBASIC1.55□□□□□ -2.16
SYNE3Q6ZMZ3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.55□□□□□ -2.16
SYNE3Q6ZMZ3 AC015922.2-201ENST00000435593 184 ntBASIC1.55□□□□□ -2.16
SYNE3Q6ZMZ3 AC023449.1-201ENST00000454464 154 ntBASIC1.55□□□□□ -2.16
SYNE3Q6ZMZ3 RNU1-123P-201ENST00000458950 160 ntBASIC1.55□□□□□ -2.16
SYNE3Q6ZMZ3 RNU6-1271P-201ENST00000517049 105 ntBASIC1.55□□□□□ -2.16
SYNE3Q6ZMZ3 AL512310.8-201ENST00000550183 120 ntBASIC1.55□□□□□ -2.16
SYNE3Q6ZMZ3 AC097639.2-201ENST00000603159 172 ntBASIC1.55□□□□□ -2.16
SYNE3Q6ZMZ3 AP000942.4-201ENST00000604811 241 ntBASIC1.55□□□□□ -2.16
SYNE3Q6ZMZ3 AC106754.2-201ENST00000623006 233 ntBASIC1.55□□□□□ -2.16
SYNE3Q6ZMZ3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.54□□□□□ -2.16
SYNE3Q6ZMZ3 Y_RNA.65-201ENST00000362846 100 ntBASIC1.54□□□□□ -2.16
SYNE3Q6ZMZ3 SNORA7.1-201ENST00000363750 139 ntBASIC1.54□□□□□ -2.16
SYNE3Q6ZMZ3 Y_RNA.435-201ENST00000384095 112 ntBASIC1.54□□□□□ -2.16
SYNE3Q6ZMZ3 SCARNA8-201ENST00000515924 131 ntBASIC1.54□□□□□ -2.16
SYNE3Q6ZMZ3 RNU6-322P-201ENST00000516010 103 ntBASIC1.54□□□□□ -2.16
SYNE3Q6ZMZ3 AC019176.1-201ENST00000518519 225 ntBASIC1.54□□□□□ -2.16
SYNE3Q6ZMZ3 MIR3664-201ENST00000579074 99 ntBASIC1.54□□□□□ -2.16
SYNE3Q6ZMZ3 AL049861.1-201ENST00000603130 150 ntBASIC1.54□□□□□ -2.16
SYNE3Q6ZMZ3 AC141273.2-201ENST00000618989 130 ntBASIC1.54□□□□□ -2.16
SYNE3Q6ZMZ3 RNU6-103P-201ENST00000363686 107 ntBASIC1.53□□□□□ -2.16
SYNE3Q6ZMZ3 RNU6-1228P-201ENST00000391014 107 ntBASIC1.53□□□□□ -2.16
SYNE3Q6ZMZ3 AL451046.2-201ENST00000403074 277 ntBASIC1.53□□□□□ -2.16
SYNE3Q6ZMZ3 MIR4498-201ENST00000577599 66 ntBASIC1.53□□□□□ -2.16
SYNE3Q6ZMZ3 MIR3937-201ENST00000580135 106 ntBASIC1.53□□□□□ -2.16
SYNE3Q6ZMZ3 GHRLOS.1-201ENST00000610995 70 ntBASIC1.53□□□□□ -2.16
SYNE3Q6ZMZ3 AL121890.5-201ENST00000620848 304 ntBASIC1.53□□□□□ -2.16
SYNE3Q6ZMZ3 Y_RNA.121-201ENST00000363309 113 ntBASIC1.52□□□□□ -2.17
SYNE3Q6ZMZ3 MIR136-201ENST00000385207 82 ntBASIC1.52□□□□□ -2.17
SYNE3Q6ZMZ3 Y_RNA.587-201ENST00000391210 103 ntBASIC1.52□□□□□ -2.17
SYNE3Q6ZMZ3 RNU4-43P-201ENST00000410628 137 ntBASIC1.52□□□□□ -2.17
SYNE3Q6ZMZ3 RNU6-1053P-201ENST00000515930 101 ntBASIC1.52□□□□□ -2.17
SYNE3Q6ZMZ3 Y_RNA.676-201ENST00000516393 96 ntBASIC1.52□□□□□ -2.17
SYNE3Q6ZMZ3 RNU6-165P-201ENST00000517170 99 ntBASIC1.52□□□□□ -2.17
SYNE3Q6ZMZ3 AL357312.1-201ENST00000603879 298 ntBASIC1.52□□□□□ -2.17
SYNE3Q6ZMZ3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
SYNE3Q6ZMZ3 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SYNE3Q6ZMZ3 Y_RNA.200-201ENST00000364018 102 ntBASIC1.51□□□□□ -2.17
SYNE3Q6ZMZ3 SNORD38C-201ENST00000384381 69 ntBASIC1.51□□□□□ -2.17
SYNE3Q6ZMZ3 RNA5SP153-201ENST00000516498 76 ntBASIC1.51□□□□□ -2.17
SYNE3Q6ZMZ3 RNU6-453P-201ENST00000516819 85 ntBASIC1.51□□□□□ -2.17
SYNE3Q6ZMZ3 SNORA74.3-201ENST00000517108 154 ntBASIC1.51□□□□□ -2.17
SYNE3Q6ZMZ3 MIR4308-201ENST00000580634 81 ntBASIC1.51□□□□□ -2.17
SYNE3Q6ZMZ3 snoU13.31-201ENST00000607291 104 ntBASIC1.51□□□□□ -2.17
SYNE3Q6ZMZ3 MIR411-201ENST00000362239 96 ntBASIC1.5□□□□□ -2.17
SYNE3Q6ZMZ3 SNORD24-201ENST00000383884 75 ntBASIC1.5□□□□□ -2.17
SYNE3Q6ZMZ3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
SYNE3Q6ZMZ3 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.5□□□□□ -2.17
SYNE3Q6ZMZ3 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.5□□□□□ -2.17
SYNE3Q6ZMZ3 RNU6-922P-201ENST00000516753 99 ntBASIC1.5□□□□□ -2.17
SYNE3Q6ZMZ3 FAM106DP-201ENST00000586416 501 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms