Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 MIR568-201ENST00000385036 95 ntBASIC1.03□□□□□ -2.24
KRT39Q6A163 AC091959.1-201ENST00000495857 238 ntBASIC1.03□□□□□ -2.24
KRT39Q6A163 RNY3P15-201ENST00000516297 97 ntBASIC1.03□□□□□ -2.24
KRT39Q6A163 RNU6-1045P-201ENST00000516321 107 ntBASIC1.03□□□□□ -2.24
KRT39Q6A163 Y_RNA.676-201ENST00000516393 96 ntBASIC1.03□□□□□ -2.24
KRT39Q6A163 RNU2-31P-201ENST00000516954 155 ntBASIC1.03□□□□□ -2.24
KRT39Q6A163 AL117187.1-201ENST00000555482 181 ntBASIC1.03□□□□□ -2.24
KRT39Q6A163 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.03□□□□□ -2.24
KRT39Q6A163 AC013791.1-201ENST00000616619 62 ntBASIC1.03□□□□□ -2.24
KRT39Q6A163 MIR103A2-201ENST00000362154 78 ntBASIC1.02□□□□□ -2.25
KRT39Q6A163 Y_RNA.64-201ENST00000362845 102 ntBASIC1.02□□□□□ -2.25
KRT39Q6A163 RNY1P10-201ENST00000363268 113 ntBASIC1.02□□□□□ -2.25
KRT39Q6A163 RNU6-1205P-201ENST00000363625 106 ntBASIC1.02□□□□□ -2.25
KRT39Q6A163 RNA5SP48-201ENST00000363969 126 ntBASIC1.02□□□□□ -2.25
KRT39Q6A163 RNU6-326P-201ENST00000365480 107 ntBASIC1.02□□□□□ -2.25
KRT39Q6A163 SNORD38C-201ENST00000384381 69 ntBASIC1.02□□□□□ -2.25
KRT39Q6A163 RNU6-830P-201ENST00000516353 107 ntBASIC1.02□□□□□ -2.25
KRT39Q6A163 AP003733.2-201ENST00000529409 171 ntBASIC1.02□□□□□ -2.25
KRT39Q6A163 AL021707.8-201ENST00000609428 183 ntBASIC1.02□□□□□ -2.25
KRT39Q6A163 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.02□□□□□ -2.25
KRT39Q6A163 SNORA25.1-201ENST00000362326 128 ntBASIC1.01□□□□□ -2.25
KRT39Q6A163 Y_RNA.16-201ENST00000362421 102 ntBASIC1.01□□□□□ -2.25
KRT39Q6A163 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.01□□□□□ -2.25
KRT39Q6A163 MTND3P2-201ENST00000438452 342 ntBASIC1.01□□□□□ -2.25
KRT39Q6A163 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.01□□□□□ -2.25
KRT39Q6A163 MIR548AR-201ENST00000582191 57 ntBASIC1.01□□□□□ -2.25
KRT39Q6A163 AL162730.1-201ENST00000605734 292 ntBASIC1.01□□□□□ -2.25
KRT39Q6A163 AC006441.5-201ENST00000612680 209 ntBASIC1.01□□□□□ -2.25
KRT39Q6A163 AC008133.2-201ENST00000624540 351 ntBASIC1.01□□□□□ -2.25
KRT39Q6A163 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
KRT39Q6A163 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1□□□□□ -2.25
KRT39Q6A163 Y_RNA.217-201ENST00000364214 105 ntBASIC1□□□□□ -2.25
KRT39Q6A163 RNU6-144P-201ENST00000383951 107 ntBASIC1□□□□□ -2.25
KRT39Q6A163 RNU6-662P-201ENST00000384253 104 ntBASIC1□□□□□ -2.25
KRT39Q6A163 RNU6-574P-201ENST00000384265 107 ntBASIC1□□□□□ -2.25
KRT39Q6A163 Y_RNA.574-201ENST00000384766 95 ntBASIC1□□□□□ -2.25
KRT39Q6A163 MIR802-201ENST00000390235 94 ntBASIC1□□□□□ -2.25
KRT39Q6A163 SNORA53-201ENST00000391141 249 ntBASIC1□□□□□ -2.25
KRT39Q6A163 RNU6-1109P-201ENST00000391187 107 ntBASIC1□□□□□ -2.25
KRT39Q6A163 RNU6-383P-201ENST00000410864 94 ntBASIC1□□□□□ -2.25
KRT39Q6A163 BTF3P11-201ENST00000426582 477 ntBASIC1□□□□□ -2.25
KRT39Q6A163 MTND4LP30-201ENST00000454092 297 ntBASIC1□□□□□ -2.25
KRT39Q6A163 RNU7-90P-201ENST00000459216 62 ntBASIC1□□□□□ -2.25
KRT39Q6A163 Y_RNA.641-201ENST00000459414 105 ntBASIC1□□□□□ -2.25
KRT39Q6A163 RNU6-635P-201ENST00000516651 102 ntBASIC1□□□□□ -2.25
KRT39Q6A163 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1□□□□□ -2.25
KRT39Q6A163 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1□□□□□ -2.25
KRT39Q6A163 AL512605.2-201ENST00000592972 256 ntBASIC1□□□□□ -2.25
KRT39Q6A163 AL020996.3-201ENST00000606617 222 ntBASIC1□□□□□ -2.25
KRT39Q6A163 Pinc.1-201ENST00000616452 154 ntBASIC1□□□□□ -2.25
KRT39Q6A163 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1□□□□□ -2.25
KRT39Q6A163 Y_RNA.84-201ENST00000363011 104 ntBASIC0.99□□□□□ -2.25
KRT39Q6A163 RNU6-472P-201ENST00000384299 107 ntBASIC0.99□□□□□ -2.25
KRT39Q6A163 MIR532-201ENST00000385025 91 ntBASIC0.99□□□□□ -2.25
KRT39Q6A163 MIR1302-7-201ENST00000408841 72 ntBASIC0.99□□□□□ -2.25
KRT39Q6A163 MTCYBP9-201ENST00000431021 303 ntBASIC0.99□□□□□ -2.25
KRT39Q6A163 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.99□□□□□ -2.25
KRT39Q6A163 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.99□□□□□ -2.25
KRT39Q6A163 MTCO2P24-201ENST00000515611 426 ntBASIC0.99□□□□□ -2.25
KRT39Q6A163 MIR5692C2-201ENST00000577959 77 ntBASIC0.99□□□□□ -2.25
KRT39Q6A163 AL008718.3-201ENST00000610217 321 ntBASIC0.99□□□□□ -2.25
KRT39Q6A163 MIR337-201ENST00000362281 93 ntBASIC0.98□□□□□ -2.25
KRT39Q6A163 Y_RNA.47-201ENST00000362697 108 ntBASIC0.98□□□□□ -2.25
KRT39Q6A163 RNU6-238P-201ENST00000363313 106 ntBASIC0.98□□□□□ -2.25
KRT39Q6A163 Y_RNA.396-201ENST00000383949 103 ntBASIC0.98□□□□□ -2.25
KRT39Q6A163 RNU6-514P-201ENST00000384208 107 ntBASIC0.98□□□□□ -2.25
KRT39Q6A163 MIR200A-201ENST00000384875 90 ntBASIC0.98□□□□□ -2.25
KRT39Q6A163 MT-TW-201ENST00000387382 68 ntBASIC0.98□□□□□ -2.25
KRT39Q6A163 AL731563.1-201ENST00000442202 214 ntBASIC0.98□□□□□ -2.25
KRT39Q6A163 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.98□□□□□ -2.25
KRT39Q6A163 RNU6-1143P-201ENST00000516125 104 ntBASIC0.98□□□□□ -2.25
KRT39Q6A163 AC037487.3-201ENST00000606668 112 ntBASIC0.98□□□□□ -2.25
KRT39Q6A163 SEPT14P17-201ENST00000617978 177 ntBASIC0.98□□□□□ -2.25
KRT39Q6A163 AC012676.2-201ENST00000619258 186 ntBASIC0.98□□□□□ -2.25
KRT39Q6A163 AC015726.2-201ENST00000620112 122 ntBASIC0.98□□□□□ -2.25
KRT39Q6A163 Y_RNA.144-201ENST00000363521 113 ntBASIC0.97□□□□□ -2.25
KRT39Q6A163 Y_RNA.152-201ENST00000363578 100 ntBASIC0.97□□□□□ -2.25
KRT39Q6A163 Y_RNA.238-201ENST00000364441 102 ntBASIC0.97□□□□□ -2.25
KRT39Q6A163 SNORD114-24-201ENST00000365029 72 ntBASIC0.97□□□□□ -2.25
KRT39Q6A163 Y_RNA.483-201ENST00000384380 101 ntBASIC0.97□□□□□ -2.25
KRT39Q6A163 U8.17-201ENST00000391292 132 ntBASIC0.97□□□□□ -2.25
KRT39Q6A163 AL392103.1-201ENST00000447000 198 ntBASIC0.97□□□□□ -2.25
KRT39Q6A163 RNU4-57P-201ENST00000515980 135 ntBASIC0.97□□□□□ -2.25
KRT39Q6A163 SNORA27.4-201ENST00000516650 95 ntBASIC0.97□□□□□ -2.25
KRT39Q6A163 MIR6857-201ENST00000613267 93 ntBASIC0.97□□□□□ -2.25
KRT39Q6A163 MIR8062-201ENST00000621515 85 ntBASIC0.97□□□□□ -2.25
KRT39Q6A163 MIR4251-201ENST00000635819 61 ntBASIC0.97□□□□□ -2.25
KRT39Q6A163 Y_RNA.149-201ENST00000363558 117 ntBASIC0.96□□□□□ -2.26
KRT39Q6A163 SNORD114-27-201ENST00000363766 70 ntBASIC0.96□□□□□ -2.26
KRT39Q6A163 Y_RNA.176-201ENST00000363815 109 ntBASIC0.96□□□□□ -2.26
KRT39Q6A163 Y_RNA.330-201ENST00000365230 109 ntBASIC0.96□□□□□ -2.26
KRT39Q6A163 Y_RNA.376-201ENST00000365638 108 ntBASIC0.96□□□□□ -2.26
KRT39Q6A163 Y_RNA.518-201ENST00000384552 113 ntBASIC0.96□□□□□ -2.26
KRT39Q6A163 MIR570-201ENST00000384917 97 ntBASIC0.96□□□□□ -2.26
KRT39Q6A163 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.96□□□□□ -2.26
KRT39Q6A163 PDCD5P2-201ENST00000507570 312 ntBASIC0.96□□□□□ -2.26
KRT39Q6A163 UBL5P1-201ENST00000507979 193 ntBASIC0.96□□□□□ -2.26
KRT39Q6A163 SERF1AP1-201ENST00000514575 187 ntBASIC0.96□□□□□ -2.26
KRT39Q6A163 RNU6-1338P-201ENST00000516328 91 ntBASIC0.96□□□□□ -2.26
KRT39Q6A163 RNU6-1007P-201ENST00000516586 107 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 256.6 ms