Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 RNU6-826P-201ENST00000516827 104 ntBASIC2.91□□□□□ -1.94
USPL1Q5W0Q7 AC084364.2-201ENST00000546924 395 ntBASIC2.91□□□□□ -1.94
USPL1Q5W0Q7 AC067747.1-201ENST00000608026 250 ntBASIC2.91□□□□□ -1.94
USPL1Q5W0Q7 AC027279.3-201ENST00000625055 122 ntBASIC2.91□□□□□ -1.94
USPL1Q5W0Q7 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
USPL1Q5W0Q7 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.91□□□□□ -1.94
USPL1Q5W0Q7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
USPL1Q5W0Q7 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
USPL1Q5W0Q7 DEFA7P-201ENST00000382676 285 ntBASIC2.9□□□□□ -1.95
USPL1Q5W0Q7 RNA5SP109-201ENST00000391010 116 ntBASIC2.9□□□□□ -1.95
USPL1Q5W0Q7 RN7SKP200-201ENST00000410564 320 ntBASIC2.9□□□□□ -1.95
USPL1Q5W0Q7 RNA5SP136-201ENST00000410906 107 ntBASIC2.9□□□□□ -1.95
USPL1Q5W0Q7 Y_RNA.630-201ENST00000411370 108 ntBASIC2.9□□□□□ -1.95
USPL1Q5W0Q7 AC087499.4-201ENST00000448505 178 ntBASIC2.9□□□□□ -1.95
USPL1Q5W0Q7 CYCTP-201ENST00000504253 315 ntBASIC2.9□□□□□ -1.95
USPL1Q5W0Q7 MIR4658-201ENST00000584344 65 ntBASIC2.9□□□□□ -1.95
USPL1Q5W0Q7 AL353997.5-201ENST00000618886 171 ntBASIC2.9□□□□□ -1.95
USPL1Q5W0Q7 AL121890.5-201ENST00000620848 304 ntBASIC2.9□□□□□ -1.95
USPL1Q5W0Q7 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.9□□□□□ -1.95
USPL1Q5W0Q7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
USPL1Q5W0Q7 MIR21-201ENST00000362134 72 ntBASIC2.89□□□□□ -1.95
USPL1Q5W0Q7 RNU6-508P-201ENST00000363231 103 ntBASIC2.89□□□□□ -1.95
USPL1Q5W0Q7 AL023284.1-201ENST00000403956 276 ntBASIC2.89□□□□□ -1.95
USPL1Q5W0Q7 BX510359.4-201ENST00000423750 193 ntBASIC2.89□□□□□ -1.95
USPL1Q5W0Q7 RPS26P48-201ENST00000491713 339 ntBASIC2.89□□□□□ -1.95
USPL1Q5W0Q7 RNU6-781P-201ENST00000516377 101 ntBASIC2.89□□□□□ -1.95
USPL1Q5W0Q7 Y_RNA.37-201ENST00000362606 108 ntBASIC2.88□□□□□ -1.95
USPL1Q5W0Q7 SNORD38C-201ENST00000384381 69 ntBASIC2.88□□□□□ -1.95
USPL1Q5W0Q7 SNORD116-21-201ENST00000384507 92 ntBASIC2.88□□□□□ -1.95
USPL1Q5W0Q7 Y_RNA.547-201ENST00000384654 119 ntBASIC2.88□□□□□ -1.95
USPL1Q5W0Q7 MIR221-201ENST00000385135 110 ntBASIC2.88□□□□□ -1.95
USPL1Q5W0Q7 RNU7-25P-201ENST00000516544 62 ntBASIC2.88□□□□□ -1.95
USPL1Q5W0Q7 AC108081.1-201ENST00000604358 221 ntBASIC2.88□□□□□ -1.95
USPL1Q5W0Q7 AC022202.1-201ENST00000613515 211 ntBASIC2.88□□□□□ -1.95
USPL1Q5W0Q7 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.88□□□□□ -1.95
USPL1Q5W0Q7 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
USPL1Q5W0Q7 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
USPL1Q5W0Q7 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
USPL1Q5W0Q7 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
USPL1Q5W0Q7 RNU1-109P-201ENST00000383960 147 ntBASIC2.87□□□□□ -1.95
USPL1Q5W0Q7 RNU6-880P-201ENST00000384526 107 ntBASIC2.87□□□□□ -1.95
USPL1Q5W0Q7 RNU11-3P-201ENST00000391111 133 ntBASIC2.87□□□□□ -1.95
USPL1Q5W0Q7 AL034345.1-201ENST00000407768 123 ntBASIC2.87□□□□□ -1.95
USPL1Q5W0Q7 AL445646.1-201ENST00000431784 216 ntBASIC2.87□□□□□ -1.95
USPL1Q5W0Q7 STAG3L5P-204ENST00000443759 179 ntBASIC2.87□□□□□ -1.95
USPL1Q5W0Q7 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.87□□□□□ -1.95
USPL1Q5W0Q7 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.86□□□□□ -1.95
USPL1Q5W0Q7 SNORA63D-201ENST00000364359 132 ntBASIC2.86□□□□□ -1.95
USPL1Q5W0Q7 SNORA2.2-201ENST00000365473 135 ntBASIC2.86□□□□□ -1.95
USPL1Q5W0Q7 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.86□□□□□ -1.95
USPL1Q5W0Q7 AC063976.4-201ENST00000421971 163 ntBASIC2.86□□□□□ -1.95
USPL1Q5W0Q7 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.86□□□□□ -1.95
USPL1Q5W0Q7 Y_RNA.649-201ENST00000459077 103 ntBASIC2.86□□□□□ -1.95
USPL1Q5W0Q7 MIR5094-201ENST00000578766 85 ntBASIC2.86□□□□□ -1.95
USPL1Q5W0Q7 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
USPL1Q5W0Q7 MTND5P18-201ENST00000445624 1801 ntBASIC2.86□□□□□ -1.95
USPL1Q5W0Q7 ZNF720P1-201ENST00000562403 1939 ntBASIC2.85□□□□□ -1.95
USPL1Q5W0Q7 RNU6-163P-201ENST00000384396 106 ntBASIC2.85□□□□□ -1.95
USPL1Q5W0Q7 RNU6-830P-201ENST00000516353 107 ntBASIC2.85□□□□□ -1.95
USPL1Q5W0Q7 RNU7-70P-201ENST00000516941 66 ntBASIC2.85□□□□□ -1.95
USPL1Q5W0Q7 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.85□□□□□ -1.95
USPL1Q5W0Q7 AL137067.1-201ENST00000615933 120 ntBASIC2.85□□□□□ -1.95
USPL1Q5W0Q7 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
USPL1Q5W0Q7 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.84□□□□□ -1.95
USPL1Q5W0Q7 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.84□□□□□ -1.95
USPL1Q5W0Q7 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
USPL1Q5W0Q7 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
USPL1Q5W0Q7 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
USPL1Q5W0Q7 AL627390.1-201ENST00000396055 340 ntBASIC2.84□□□□□ -1.95
USPL1Q5W0Q7 MIR1283-2-201ENST00000408621 87 ntBASIC2.84□□□□□ -1.95
USPL1Q5W0Q7 RNU7-80P-201ENST00000459562 61 ntBASIC2.84□□□□□ -1.95
USPL1Q5W0Q7 MIR376A2-201ENST00000636782 80 ntBASIC2.84□□□□□ -1.95
USPL1Q5W0Q7 AC131280.1-202ENST00000624067 4211 ntBASIC2.84□□□□□ -1.96
USPL1Q5W0Q7 MIRLET7C-201ENST00000362160 84 ntBASIC2.83□□□□□ -1.96
USPL1Q5W0Q7 Y_RNA.454-201ENST00000384224 113 ntBASIC2.83□□□□□ -1.96
USPL1Q5W0Q7 MIR518A2-201ENST00000384966 87 ntBASIC2.83□□□□□ -1.96
USPL1Q5W0Q7 RNA5SP181-201ENST00000410246 98 ntBASIC2.83□□□□□ -1.96
USPL1Q5W0Q7 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.83□□□□□ -1.96
USPL1Q5W0Q7 COX6CP6-201ENST00000490840 228 ntBASIC2.83□□□□□ -1.96
USPL1Q5W0Q7 AC114811.1-201ENST00000507207 168 ntBASIC2.83□□□□□ -1.96
USPL1Q5W0Q7 RNA5SP458-201ENST00000516188 119 ntBASIC2.83□□□□□ -1.96
USPL1Q5W0Q7 Y_RNA.676-201ENST00000516393 96 ntBASIC2.83□□□□□ -1.96
USPL1Q5W0Q7 SNORA31.10-201ENST00000516482 106 ntBASIC2.83□□□□□ -1.96
USPL1Q5W0Q7 IGKV1-22-201ENST00000524313 326 ntBASIC2.83□□□□□ -1.96
USPL1Q5W0Q7 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.83□□□□□ -1.96
USPL1Q5W0Q7 MIR219B-201ENST00000637023 88 ntBASIC2.83□□□□□ -1.96
USPL1Q5W0Q7 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
USPL1Q5W0Q7 SNORA22-201ENST00000383907 134 ntBASIC2.82□□□□□ -1.96
USPL1Q5W0Q7 Y_RNA.440-201ENST00000384120 114 ntBASIC2.82□□□□□ -1.96
USPL1Q5W0Q7 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
USPL1Q5W0Q7 SNORA48.1-201ENST00000390879 135 ntBASIC2.82□□□□□ -1.96
USPL1Q5W0Q7 HMGN2P39-201ENST00000398005 273 ntBASIC2.82□□□□□ -1.96
USPL1Q5W0Q7 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
USPL1Q5W0Q7 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.82□□□□□ -1.96
USPL1Q5W0Q7 AP003484.1-201ENST00000530974 250 ntBASIC2.82□□□□□ -1.96
USPL1Q5W0Q7 MIR4778-201ENST00000577635 80 ntBASIC2.82□□□□□ -1.96
USPL1Q5W0Q7 AC015726.2-201ENST00000620112 122 ntBASIC2.82□□□□□ -1.96
USPL1Q5W0Q7 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.82□□□□□ -1.96
USPL1Q5W0Q7 AL442644.1-201ENST00000454390 3105 ntBASIC2.82□□□□□ -1.96
USPL1Q5W0Q7 RNU6-833P-201ENST00000363486 107 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms