Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AP002795.1-201ENST00000534879 84 ntBASIC-1.28□□□□□ -2.61
RIF1Q5UIP0 AC097460.3-201ENST00000623099 442 ntBASIC-1.28□□□□□ -2.61
RIF1Q5UIP0 AL138960.2-201ENST00000625145 535 ntBASIC-1.28□□□□□ -2.61
RIF1Q5UIP0 SNORA18-201ENST00000384416 132 ntBASIC-1.28□□□□□ -2.61
RIF1Q5UIP0 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-1.28□□□□□ -2.61
RIF1Q5UIP0 SNRPGP14-201ENST00000435400 219 ntBASIC-1.28□□□□□ -2.61
RIF1Q5UIP0 MTCO2P6-201ENST00000463134 685 ntBASIC-1.28□□□□□ -2.61
RIF1Q5UIP0 RNU6-397P-201ENST00000516226 104 ntBASIC-1.28□□□□□ -2.61
RIF1Q5UIP0 RNU7-181P-201ENST00000517234 74 ntBASIC-1.28□□□□□ -2.61
RIF1Q5UIP0 AL121655.1-201ENST00000605811 308 ntBASIC-1.28□□□□□ -2.61
RIF1Q5UIP0 AL136370.1-201ENST00000608166 691 ntBASIC-1.28□□□□□ -2.61
RIF1Q5UIP0 snoR1.1-201ENST00000628177 80 ntBASIC-1.28□□□□□ -2.61
RIF1Q5UIP0 MIR376A2-201ENST00000636782 80 ntBASIC-1.28□□□□□ -2.61
RIF1Q5UIP0 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.29□□□□□ -2.62
RIF1Q5UIP0 MIR548I3-201ENST00000408378 149 ntBASIC-1.29□□□□□ -2.62
RIF1Q5UIP0 Y_RNA.598-201ENST00000410480 95 ntBASIC-1.29□□□□□ -2.62
RIF1Q5UIP0 Y_RNA.687-201ENST00000516558 91 ntBASIC-1.29□□□□□ -2.62
RIF1Q5UIP0 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.29□□□□□ -2.62
RIF1Q5UIP0 AC115990.1-201ENST00000526957 301 ntBASIC-1.29□□□□□ -2.62
RIF1Q5UIP0 YWHAEP2-201ENST00000580066 112 ntBASIC-1.29□□□□□ -2.62
RIF1Q5UIP0 MIR6773-201ENST00000612812 74 ntBASIC-1.29□□□□□ -2.62
RIF1Q5UIP0 AC091931.1-201ENST00000623488 728 ntBASIC-1.29□□□□□ -2.62
RIF1Q5UIP0 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.29□□□□□ -2.62
RIF1Q5UIP0 RNU6-167P-201ENST00000384292 106 ntBASIC-1.29□□□□□ -2.62
RIF1Q5UIP0 RNU6-1190P-201ENST00000410811 104 ntBASIC-1.29□□□□□ -2.62
RIF1Q5UIP0 MTCYBP39-201ENST00000437562 491 ntBASIC-1.29□□□□□ -2.62
RIF1Q5UIP0 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.29□□□□□ -2.62
RIF1Q5UIP0 EPS15P1-201ENST00000448836 336 ntBASIC-1.29□□□□□ -2.62
RIF1Q5UIP0 snoU13.8-201ENST00000458890 104 ntBASIC-1.29□□□□□ -2.62
RIF1Q5UIP0 AL358944.1-201ENST00000528537 144 ntBASIC-1.29□□□□□ -2.62
RIF1Q5UIP0 AC012467.1-201ENST00000607740 256 ntBASIC-1.29□□□□□ -2.62
RIF1Q5UIP0 RNU6-336P-201ENST00000364891 107 ntBASIC-1.3□□□□□ -2.62
RIF1Q5UIP0 MIR562-201ENST00000384894 95 ntBASIC-1.3□□□□□ -2.62
RIF1Q5UIP0 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-1.3□□□□□ -2.62
RIF1Q5UIP0 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-1.3□□□□□ -2.62
RIF1Q5UIP0 AC011373.1-201ENST00000607270 237 ntBASIC-1.3□□□□□ -2.62
RIF1Q5UIP0 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.3□□□□□ -2.62
RIF1Q5UIP0 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-1.3□□□□□ -2.62
RIF1Q5UIP0 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-1.3□□□□□ -2.62
RIF1Q5UIP0 RNU6-873P-201ENST00000363833 107 ntBASIC-1.3□□□□□ -2.62
RIF1Q5UIP0 RNU6-708P-201ENST00000384217 107 ntBASIC-1.3□□□□□ -2.62
RIF1Q5UIP0 RNU6-400P-201ENST00000391173 106 ntBASIC-1.3□□□□□ -2.62
RIF1Q5UIP0 Y_RNA.623-201ENST00000411128 95 ntBASIC-1.3□□□□□ -2.62
RIF1Q5UIP0 RNU6-592P-201ENST00000411333 103 ntBASIC-1.3□□□□□ -2.62
RIF1Q5UIP0 RPL39P6-201ENST00000448289 150 ntBASIC-1.3□□□□□ -2.62
RIF1Q5UIP0 AC097510.1-201ENST00000510945 133 ntBASIC-1.3□□□□□ -2.62
RIF1Q5UIP0 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-1.3□□□□□ -2.62
RIF1Q5UIP0 MIR4762-201ENST00000585261 75 ntBASIC-1.3□□□□□ -2.62
RIF1Q5UIP0 RNU6-552P-201ENST00000362869 119 ntBASIC-1.31□□□□□ -2.62
RIF1Q5UIP0 RNU6-653P-201ENST00000363074 106 ntBASIC-1.31□□□□□ -2.62
RIF1Q5UIP0 RNU4-50P-201ENST00000364361 141 ntBASIC-1.31□□□□□ -2.62
RIF1Q5UIP0 SNORA27.3-201ENST00000364937 134 ntBASIC-1.31□□□□□ -2.62
RIF1Q5UIP0 RNU2-29P-201ENST00000410423 189 ntBASIC-1.31□□□□□ -2.62
RIF1Q5UIP0 AC090960.1-201ENST00000421072 306 ntBASIC-1.31□□□□□ -2.62
RIF1Q5UIP0 Y_RNA.797-201ENST00000515977 94 ntBASIC-1.31□□□□□ -2.62
RIF1Q5UIP0 RNU7-28P-201ENST00000516759 62 ntBASIC-1.31□□□□□ -2.62
RIF1Q5UIP0 MTND3P13-201ENST00000574391 343 ntBASIC-1.31□□□□□ -2.62
RIF1Q5UIP0 TUSC7.1-201ENST00000610969 165 ntBASIC-1.31□□□□□ -2.62
RIF1Q5UIP0 Z97988.1-201ENST00000637697 135 ntBASIC-1.31□□□□□ -2.62
RIF1Q5UIP0 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-1.31□□□□□ -2.62
RIF1Q5UIP0 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.31□□□□□ -2.62
RIF1Q5UIP0 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.31□□□□□ -2.62
RIF1Q5UIP0 RNU6-378P-201ENST00000384324 107 ntBASIC-1.31□□□□□ -2.62
RIF1Q5UIP0 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.31□□□□□ -2.62
RIF1Q5UIP0 AL049829.1-201ENST00000465411 156 ntBASIC-1.31□□□□□ -2.62
RIF1Q5UIP0 RPL30P10-201ENST00000488148 337 ntBASIC-1.31□□□□□ -2.62
RIF1Q5UIP0 MTND3P5-201ENST00000512798 333 ntBASIC-1.31□□□□□ -2.62
RIF1Q5UIP0 SNORA31.3-201ENST00000516029 96 ntBASIC-1.31□□□□□ -2.62
RIF1Q5UIP0 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC-1.31□□□□□ -2.62
RIF1Q5UIP0 AC096586.1-201ENST00000610267 561 ntBASIC-1.31□□□□□ -2.62
RIF1Q5UIP0 MIR548AY-201ENST00000617669 107 ntBASIC-1.31□□□□□ -2.62
RIF1Q5UIP0 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.32□□□□□ -2.62
RIF1Q5UIP0 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.32□□□□□ -2.62
RIF1Q5UIP0 RNU6-1240P-201ENST00000365155 104 ntBASIC-1.32□□□□□ -2.62
RIF1Q5UIP0 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC-1.32□□□□□ -2.62
RIF1Q5UIP0 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC-1.32□□□□□ -2.62
RIF1Q5UIP0 AC108059.2-201ENST00000434626 151 ntBASIC-1.32□□□□□ -2.62
RIF1Q5UIP0 AC236972.2-201ENST00000434979 310 ntBASIC-1.32□□□□□ -2.62
RIF1Q5UIP0 MTATP6P13-201ENST00000438531 667 ntBASIC-1.32□□□□□ -2.62
RIF1Q5UIP0 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.32□□□□□ -2.62
RIF1Q5UIP0 AC022306.3-201ENST00000619930 550 ntBASIC-1.32□□□□□ -2.62
RIF1Q5UIP0 AC013437.2-201ENST00000639587 677 ntBASIC-1.32□□□□□ -2.62
RIF1Q5UIP0 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.32□□□□□ -2.62
RIF1Q5UIP0 AL365203.2-201ENST00000423444 196 ntBASIC-1.32□□□□□ -2.62
RIF1Q5UIP0 RPL23AP30-201ENST00000432419 501 ntBASIC-1.32□□□□□ -2.62
RIF1Q5UIP0 AC114982.2-201ENST00000461396 358 ntBASIC-1.32□□□□□ -2.62
RIF1Q5UIP0 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-1.32□□□□□ -2.62
RIF1Q5UIP0 RNU7-13P-201ENST00000516413 62 ntBASIC-1.32□□□□□ -2.62
RIF1Q5UIP0 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-1.32□□□□□ -2.62
RIF1Q5UIP0 FGF7P6-202ENST00000451282 293 ntBASIC-1.33□□□□□ -2.62
RIF1Q5UIP0 RNU6-221P-201ENST00000459541 99 ntBASIC-1.33□□□□□ -2.62
RIF1Q5UIP0 MTCO1P29-201ENST00000496868 288 ntBASIC-1.33□□□□□ -2.62
RIF1Q5UIP0 SNORA43.2-201ENST00000516652 128 ntBASIC-1.33□□□□□ -2.62
RIF1Q5UIP0 MTND1P7-201ENST00000632801 297 ntBASIC-1.33□□□□□ -2.62
RIF1Q5UIP0 AC103706.2-201ENST00000638080 240 ntBASIC-1.33□□□□□ -2.62
RIF1Q5UIP0 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.33□□□□□ -2.62
RIF1Q5UIP0 SNORD115-21-201ENST00000362963 81 ntBASIC-1.33□□□□□ -2.62
RIF1Q5UIP0 MIR548A2-201ENST00000384956 97 ntBASIC-1.33□□□□□ -2.62
RIF1Q5UIP0 RNU6-847P-201ENST00000411115 108 ntBASIC-1.33□□□□□ -2.62
RIF1Q5UIP0 USP9YP30-201ENST00000430729 455 ntBASIC-1.33□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms