Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.16□□□□□ -2.6
VPS13DQ5THJ4 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.16□□□□□ -2.6
VPS13DQ5THJ4 AC013437.2-201ENST00000639587 677 ntBASIC-1.16□□□□□ -2.6
VPS13DQ5THJ4 RNU6-216P-201ENST00000363282 104 ntBASIC-1.17□□□□□ -2.6
VPS13DQ5THJ4 RNA5SP133-201ENST00000363368 119 ntBASIC-1.17□□□□□ -2.6
VPS13DQ5THJ4 RNU6-343P-201ENST00000364709 104 ntBASIC-1.17□□□□□ -2.6
VPS13DQ5THJ4 SNORA72.6-201ENST00000384520 129 ntBASIC-1.17□□□□□ -2.6
VPS13DQ5THJ4 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-1.17□□□□□ -2.6
VPS13DQ5THJ4 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC-1.17□□□□□ -2.6
VPS13DQ5THJ4 AL049829.1-201ENST00000465411 156 ntBASIC-1.17□□□□□ -2.6
VPS13DQ5THJ4 SNORD63.1-201ENST00000516178 80 ntBASIC-1.17□□□□□ -2.6
VPS13DQ5THJ4 AL133153.1-201ENST00000557756 303 ntBASIC-1.17□□□□□ -2.6
VPS13DQ5THJ4 AC007012.1-201ENST00000567192 175 ntBASIC-1.17□□□□□ -2.6
VPS13DQ5THJ4 SNORD115-34-201ENST00000362441 82 ntBASIC-1.17□□□□□ -2.6
VPS13DQ5THJ4 SNORA72-201ENST00000384339 132 ntBASIC-1.17□□□□□ -2.6
VPS13DQ5THJ4 RNU6-855P-201ENST00000410395 104 ntBASIC-1.17□□□□□ -2.6
VPS13DQ5THJ4 RNU2-13P-201ENST00000515909 113 ntBASIC-1.17□□□□□ -2.6
VPS13DQ5THJ4 AC103706.2-201ENST00000638080 240 ntBASIC-1.17□□□□□ -2.6
VPS13DQ5THJ4 MIR421-201ENST00000365696 85 ntBASIC-1.17□□□□□ -2.6
VPS13DQ5THJ4 MIR599-201ENST00000385069 95 ntBASIC-1.17□□□□□ -2.6
VPS13DQ5THJ4 AC010587.1-201ENST00000505809 469 ntBASIC-1.17□□□□□ -2.6
VPS13DQ5THJ4 MIR4748-201ENST00000578076 82 ntBASIC-1.17□□□□□ -2.6
VPS13DQ5THJ4 AC133794.1-201ENST00000602731 914 ntBASIC-1.17□□□□□ -2.6
VPS13DQ5THJ4 AC090617.9-201ENST00000623751 147 ntBASIC-1.17□□□□□ -2.6
VPS13DQ5THJ4 RNY1P2-201ENST00000364820 117 ntBASIC-1.17□□□□□ -2.6
VPS13DQ5THJ4 RNU6-602P-201ENST00000411155 105 ntBASIC-1.17□□□□□ -2.6
VPS13DQ5THJ4 MIR3146-201ENST00000580367 79 ntBASIC-1.17□□□□□ -2.6
VPS13DQ5THJ4 RNU6-476P-201ENST00000384726 107 ntBASIC-1.18□□□□□ -2.6
VPS13DQ5THJ4 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.18□□□□□ -2.6
VPS13DQ5THJ4 AC114878.1-201ENST00000441166 358 ntBASIC-1.18□□□□□ -2.6
VPS13DQ5THJ4 AL137792.2-201ENST00000443484 235 ntBASIC-1.18□□□□□ -2.6
VPS13DQ5THJ4 AC117522.1-201ENST00000509821 380 ntBASIC-1.18□□□□□ -2.6
VPS13DQ5THJ4 MIR4666A-201ENST00000580160 79 ntBASIC-1.18□□□□□ -2.6
VPS13DQ5THJ4 MIR4293-201ENST00000584305 78 ntBASIC-1.18□□□□□ -2.6
VPS13DQ5THJ4 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.18□□□□□ -2.6
VPS13DQ5THJ4 SNORA20B-201ENST00000384220 132 ntBASIC-1.18□□□□□ -2.6
VPS13DQ5THJ4 MIR578-201ENST00000384828 96 ntBASIC-1.18□□□□□ -2.6
VPS13DQ5THJ4 RNU6-258P-201ENST00000390884 101 ntBASIC-1.18□□□□□ -2.6
VPS13DQ5THJ4 MTCO1P57-201ENST00000432182 261 ntBASIC-1.18□□□□□ -2.6
VPS13DQ5THJ4 AC087752.4-201ENST00000605911 462 ntBASIC-1.18□□□□□ -2.6
VPS13DQ5THJ4 RNU6-924P-201ENST00000362926 108 ntBASIC-1.18□□□□□ -2.6
VPS13DQ5THJ4 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.18□□□□□ -2.6
VPS13DQ5THJ4 SNORD114-4-201ENST00000363962 75 ntBASIC-1.18□□□□□ -2.6
VPS13DQ5THJ4 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.18□□□□□ -2.6
VPS13DQ5THJ4 SNORA62.4-201ENST00000365504 151 ntBASIC-1.18□□□□□ -2.6
VPS13DQ5THJ4 RNU2-29P-201ENST00000410423 189 ntBASIC-1.18□□□□□ -2.6
VPS13DQ5THJ4 ADI1P3-201ENST00000549509 470 ntBASIC-1.18□□□□□ -2.6
VPS13DQ5THJ4 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.18□□□□□ -2.6
VPS13DQ5THJ4 SNORD115-12-201ENST00000362583 82 ntBASIC-1.19□□□□□ -2.6
VPS13DQ5THJ4 SNORD115-29-201ENST00000362834 82 ntBASIC-1.19□□□□□ -2.6
VPS13DQ5THJ4 SNORD115-9-201ENST00000362912 82 ntBASIC-1.19□□□□□ -2.6
VPS13DQ5THJ4 SNORD115-21-201ENST00000362963 81 ntBASIC-1.19□□□□□ -2.6
VPS13DQ5THJ4 SNORD115-14-201ENST00000363090 81 ntBASIC-1.19□□□□□ -2.6
VPS13DQ5THJ4 SNORD115-11-201ENST00000363616 82 ntBASIC-1.19□□□□□ -2.6
VPS13DQ5THJ4 SNORD115-5-201ENST00000363633 82 ntBASIC-1.19□□□□□ -2.6
VPS13DQ5THJ4 SNORD115-39-201ENST00000363694 82 ntBASIC-1.19□□□□□ -2.6
VPS13DQ5THJ4 SNORD115-4-201ENST00000363810 82 ntBASIC-1.19□□□□□ -2.6
VPS13DQ5THJ4 SNORD115-6-201ENST00000363942 82 ntBASIC-1.19□□□□□ -2.6
VPS13DQ5THJ4 SNORD115-15-201ENST00000364809 81 ntBASIC-1.19□□□□□ -2.6
VPS13DQ5THJ4 SNORD115-1-201ENST00000364961 82 ntBASIC-1.19□□□□□ -2.6
VPS13DQ5THJ4 SNORD115-26-201ENST00000365067 82 ntBASIC-1.19□□□□□ -2.6
VPS13DQ5THJ4 SNORD115-10-201ENST00000365073 81 ntBASIC-1.19□□□□□ -2.6
VPS13DQ5THJ4 RNU6-609P-201ENST00000365459 107 ntBASIC-1.19□□□□□ -2.6
VPS13DQ5THJ4 SNORD115-43-201ENST00000365503 82 ntBASIC-1.19□□□□□ -2.6
VPS13DQ5THJ4 SNORD115-36-201ENST00000365629 82 ntBASIC-1.19□□□□□ -2.6
VPS13DQ5THJ4 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-1.19□□□□□ -2.6
VPS13DQ5THJ4 AC096949.1-201ENST00000412047 152 ntBASIC-1.19□□□□□ -2.6
VPS13DQ5THJ4 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-1.19□□□□□ -2.6
VPS13DQ5THJ4 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.19□□□□□ -2.6
VPS13DQ5THJ4 AC145350.1-201ENST00000567426 208 ntBASIC-1.19□□□□□ -2.6
VPS13DQ5THJ4 RNU6-252P-201ENST00000363232 107 ntBASIC-1.19□□□□□ -2.6
VPS13DQ5THJ4 SNORA20.2-201ENST00000383922 131 ntBASIC-1.19□□□□□ -2.6
VPS13DQ5THJ4 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.19□□□□□ -2.6
VPS13DQ5THJ4 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC-1.19□□□□□ -2.6
VPS13DQ5THJ4 DEFB108A-201ENST00000530110 222 ntBASIC-1.19□□□□□ -2.6
VPS13DQ5THJ4 SNORD87-201ENST00000364849 89 ntBASIC-1.19□□□□□ -2.6
VPS13DQ5THJ4 RNU6-831P-201ENST00000384548 107 ntBASIC-1.19□□□□□ -2.6
VPS13DQ5THJ4 MIR4490-201ENST00000582647 84 ntBASIC-1.19□□□□□ -2.6
VPS13DQ5THJ4 AL008718.3-201ENST00000610217 321 ntBASIC-1.19□□□□□ -2.6
VPS13DQ5THJ4 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.19□□□□□ -2.6
VPS13DQ5THJ4 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.19□□□□□ -2.6
VPS13DQ5THJ4 RNU6-429P-201ENST00000384582 108 ntBASIC-1.19□□□□□ -2.6
VPS13DQ5THJ4 RNY3P9-201ENST00000384727 106 ntBASIC-1.19□□□□□ -2.6
VPS13DQ5THJ4 AL137161.1-201ENST00000532231 390 ntBASIC-1.19□□□□□ -2.6
VPS13DQ5THJ4 MTND1P24-201ENST00000552175 861 ntBASIC-1.19□□□□□ -2.6
VPS13DQ5THJ4 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-1.19□□□□□ -2.6
VPS13DQ5THJ4 SNORD115-28-201ENST00000363931 81 ntBASIC-1.2□□□□□ -2.6
VPS13DQ5THJ4 FGF7P6-202ENST00000451282 293 ntBASIC-1.2□□□□□ -2.6
VPS13DQ5THJ4 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.2□□□□□ -2.6
VPS13DQ5THJ4 MIR4460-201ENST00000577862 86 ntBASIC-1.2□□□□□ -2.6
VPS13DQ5THJ4 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.2□□□□□ -2.6
VPS13DQ5THJ4 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.2□□□□□ -2.6
VPS13DQ5THJ4 SNORA63.5-201ENST00000363548 123 ntBASIC-1.2□□□□□ -2.6
VPS13DQ5THJ4 RNY3P13-201ENST00000365542 102 ntBASIC-1.2□□□□□ -2.6
VPS13DQ5THJ4 RNU6-1189P-201ENST00000383958 107 ntBASIC-1.2□□□□□ -2.6
VPS13DQ5THJ4 SNORD75.2-201ENST00000408784 58 ntBASIC-1.2□□□□□ -2.6
VPS13DQ5THJ4 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-1.2□□□□□ -2.6
VPS13DQ5THJ4 Y_RNA.721-201ENST00000517207 102 ntBASIC-1.2□□□□□ -2.6
VPS13DQ5THJ4 AC174048.1-201ENST00000603389 144 ntBASIC-1.2□□□□□ -2.6
VPS13DQ5THJ4 RN7SKP299-201ENST00000606679 301 ntBASIC-1.2□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms