Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 Y_RNA.168-201ENST00000363740 102 ntBASIC3.06□□□□□ -1.92
RNFT1Q5M7Z0 Y_RNA.205-201ENST00000364128 113 ntBASIC3.06□□□□□ -1.92
RNFT1Q5M7Z0 RNU6-865P-201ENST00000364772 107 ntBASIC3.06□□□□□ -1.92
RNFT1Q5M7Z0 RNU6-686P-201ENST00000364839 107 ntBASIC3.06□□□□□ -1.92
RNFT1Q5M7Z0 Y_RNA.386-201ENST00000383913 105 ntBASIC3.06□□□□□ -1.92
RNFT1Q5M7Z0 SNORD38.2-201ENST00000384470 69 ntBASIC3.06□□□□□ -1.92
RNFT1Q5M7Z0 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.06□□□□□ -1.92
RNFT1Q5M7Z0 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
RNFT1Q5M7Z0 AC006989.1-201ENST00000427212 131 ntBASIC3.06□□□□□ -1.92
RNFT1Q5M7Z0 AC245047.3-201ENST00000429428 127 ntBASIC3.06□□□□□ -1.92
RNFT1Q5M7Z0 AC087499.7-201ENST00000441958 109 ntBASIC3.06□□□□□ -1.92
RNFT1Q5M7Z0 SPINT5P-201ENST00000448174 155 ntBASIC3.06□□□□□ -1.92
RNFT1Q5M7Z0 CYP2C59P-201ENST00000457790 269 ntBASIC3.06□□□□□ -1.92
RNFT1Q5M7Z0 TRBV12-1-201ENST00000479785 344 ntBASIC3.06□□□□□ -1.92
RNFT1Q5M7Z0 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
RNFT1Q5M7Z0 SNORA48.11-201ENST00000517015 89 ntBASIC3.06□□□□□ -1.92
RNFT1Q5M7Z0 RNU6-1015P-201ENST00000517121 99 ntBASIC3.06□□□□□ -1.92
RNFT1Q5M7Z0 Z83843.1-201ENST00000604070 3685 ntBASIC3.06□□□□□ -1.92
RNFT1Q5M7Z0 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.06□□□□□ -1.92
RNFT1Q5M7Z0 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.06□□□□□ -1.92
RNFT1Q5M7Z0 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.06□□□□□ -1.92
RNFT1Q5M7Z0 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
RNFT1Q5M7Z0 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
RNFT1Q5M7Z0 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
RNFT1Q5M7Z0 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RNFT1Q5M7Z0 RNA5SP374-201ENST00000362939 125 ntBASIC3.05□□□□□ -1.92
RNFT1Q5M7Z0 SNORA24-201ENST00000384096 131 ntBASIC3.05□□□□□ -1.92
RNFT1Q5M7Z0 MIR181B2-201ENST00000385004 89 ntBASIC3.05□□□□□ -1.92
RNFT1Q5M7Z0 RNU2-59P-201ENST00000410482 191 ntBASIC3.05□□□□□ -1.92
RNFT1Q5M7Z0 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
RNFT1Q5M7Z0 RPS29P31-201ENST00000446147 164 ntBASIC3.05□□□□□ -1.92
RNFT1Q5M7Z0 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.05□□□□□ -1.92
RNFT1Q5M7Z0 AC020891.4-201ENST00000605745 93 ntBASIC3.05□□□□□ -1.92
RNFT1Q5M7Z0 MIR7157-201ENST00000635801 60 ntBASIC3.05□□□□□ -1.92
RNFT1Q5M7Z0 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
RNFT1Q5M7Z0 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RNFT1Q5M7Z0 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.04□□□□□ -1.92
RNFT1Q5M7Z0 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
RNFT1Q5M7Z0 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.04□□□□□ -1.92
RNFT1Q5M7Z0 MIRLET7C-201ENST00000362160 84 ntBASIC3.04□□□□□ -1.92
RNFT1Q5M7Z0 MIR1289-1-201ENST00000408836 144 ntBASIC3.04□□□□□ -1.92
RNFT1Q5M7Z0 RPS29P29-201ENST00000456396 171 ntBASIC3.04□□□□□ -1.92
RNFT1Q5M7Z0 RNU7-73P-201ENST00000458743 63 ntBASIC3.04□□□□□ -1.92
RNFT1Q5M7Z0 snoU13.11-201ENST00000459219 104 ntBASIC3.04□□□□□ -1.92
RNFT1Q5M7Z0 RNU6-958P-201ENST00000516995 106 ntBASIC3.04□□□□□ -1.92
RNFT1Q5M7Z0 RNU7-35P-201ENST00000517174 62 ntBASIC3.04□□□□□ -1.92
RNFT1Q5M7Z0 AL020996.3-201ENST00000606617 222 ntBASIC3.04□□□□□ -1.92
RNFT1Q5M7Z0 RNVU1-4-201ENST00000612985 164 ntBASIC3.04□□□□□ -1.92
RNFT1Q5M7Z0 AC022149.2-201ENST00000621061 203 ntBASIC3.04□□□□□ -1.92
RNFT1Q5M7Z0 AC110079.1-202ENST00000635213 138 ntBASIC3.04□□□□□ -1.92
RNFT1Q5M7Z0 AC093010.3-201ENST00000570269 15214 ntBASIC3.04□□□□□ -1.92
RNFT1Q5M7Z0 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
RNFT1Q5M7Z0 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RNFT1Q5M7Z0 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.04□□□□□ -1.92
RNFT1Q5M7Z0 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
RNFT1Q5M7Z0 FO393413.1-201ENST00000402892 195 ntBASIC3.03□□□□□ -1.92
RNFT1Q5M7Z0 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.03□□□□□ -1.92
RNFT1Q5M7Z0 RNU7-67P-201ENST00000459003 62 ntBASIC3.03□□□□□ -1.92
RNFT1Q5M7Z0 Y_RNA.660-201ENST00000516002 120 ntBASIC3.03□□□□□ -1.92
RNFT1Q5M7Z0 RNU6-1116P-201ENST00000517269 99 ntBASIC3.03□□□□□ -1.92
RNFT1Q5M7Z0 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC3.03□□□□□ -1.92
RNFT1Q5M7Z0 FAM106DP-201ENST00000586416 501 ntBASIC3.03□□□□□ -1.92
RNFT1Q5M7Z0 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.03□□□□□ -1.92
RNFT1Q5M7Z0 AL356280.1-201ENST00000603614 379 ntBASIC3.03□□□□□ -1.92
RNFT1Q5M7Z0 AC012676.2-201ENST00000619258 186 ntBASIC3.03□□□□□ -1.92
RNFT1Q5M7Z0 MIR7153-201ENST00000637758 57 ntBASIC3.03□□□□□ -1.92
RNFT1Q5M7Z0 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RNFT1Q5M7Z0 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
RNFT1Q5M7Z0 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.93
RNFT1Q5M7Z0 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.02□□□□□ -1.93
RNFT1Q5M7Z0 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.02□□□□□ -1.93
RNFT1Q5M7Z0 SNORA63.2-201ENST00000362603 126 ntBASIC3.02□□□□□ -1.93
RNFT1Q5M7Z0 Y_RNA.370-201ENST00000365589 108 ntBASIC3.02□□□□□ -1.93
RNFT1Q5M7Z0 Y_RNA.448-201ENST00000384185 108 ntBASIC3.02□□□□□ -1.93
RNFT1Q5M7Z0 RNU6-447P-201ENST00000410293 104 ntBASIC3.02□□□□□ -1.93
RNFT1Q5M7Z0 RNU6-1118P-201ENST00000410382 104 ntBASIC3.02□□□□□ -1.93
RNFT1Q5M7Z0 RNU6-1076P-201ENST00000410397 104 ntBASIC3.02□□□□□ -1.93
RNFT1Q5M7Z0 RNU6-355P-201ENST00000410427 104 ntBASIC3.02□□□□□ -1.93
RNFT1Q5M7Z0 RNU6-791P-201ENST00000410467 104 ntBASIC3.02□□□□□ -1.93
RNFT1Q5M7Z0 RNU6-705P-201ENST00000410601 104 ntBASIC3.02□□□□□ -1.93
RNFT1Q5M7Z0 RNU6-1100P-201ENST00000410691 104 ntBASIC3.02□□□□□ -1.93
RNFT1Q5M7Z0 RNU6-1190P-201ENST00000410811 104 ntBASIC3.02□□□□□ -1.93
RNFT1Q5M7Z0 RNU6-860P-201ENST00000410860 104 ntBASIC3.02□□□□□ -1.93
RNFT1Q5M7Z0 RNU6-1217P-201ENST00000411276 104 ntBASIC3.02□□□□□ -1.93
RNFT1Q5M7Z0 RNU6-785P-201ENST00000411324 104 ntBASIC3.02□□□□□ -1.93
RNFT1Q5M7Z0 CST9LP2-201ENST00000437612 320 ntBASIC3.02□□□□□ -1.93
RNFT1Q5M7Z0 RNU6-634P-201ENST00000459134 106 ntBASIC3.02□□□□□ -1.93
RNFT1Q5M7Z0 AC234781.5-201ENST00000508429 271 ntBASIC3.02□□□□□ -1.93
RNFT1Q5M7Z0 MIR5004-201ENST00000579078 107 ntBASIC3.02□□□□□ -1.93
RNFT1Q5M7Z0 SNORA28-201ENST00000606769 126 ntBASIC3.02□□□□□ -1.93
RNFT1Q5M7Z0 MIR4791-201ENST00000607666 84 ntBASIC3.02□□□□□ -1.93
RNFT1Q5M7Z0 U6.90-201ENST00000614007 104 ntBASIC3.02□□□□□ -1.93
RNFT1Q5M7Z0 U6.70-201ENST00000620287 104 ntBASIC3.02□□□□□ -1.93
RNFT1Q5M7Z0 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.02□□□□□ -1.93
RNFT1Q5M7Z0 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
RNFT1Q5M7Z0 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RNFT1Q5M7Z0 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
RNFT1Q5M7Z0 AC093831.2-201ENST00000624393 3427 ntBASIC3.02□□□□□ -1.93
RNFT1Q5M7Z0 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.02□□□□□ -1.93
RNFT1Q5M7Z0 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms