Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.18□□□□□ -2.06
CCDC144BQ3MJ40 AL513534.2-201ENST00000603836 250 ntBASIC2.18□□□□□ -2.06
CCDC144BQ3MJ40 Y_RNA.29-201ENST00000362570 113 ntBASIC2.17□□□□□ -2.06
CCDC144BQ3MJ40 RNU6-457P-201ENST00000363999 107 ntBASIC2.17□□□□□ -2.06
CCDC144BQ3MJ40 Y_RNA.785-201ENST00000384290 109 ntBASIC2.17□□□□□ -2.06
CCDC144BQ3MJ40 MT-TT-201ENST00000387460 66 ntBASIC2.17□□□□□ -2.06
CCDC144BQ3MJ40 RNU6-578P-201ENST00000390980 103 ntBASIC2.17□□□□□ -2.06
CCDC144BQ3MJ40 SNORA17.3-201ENST00000391159 129 ntBASIC2.17□□□□□ -2.06
CCDC144BQ3MJ40 AC108667.1-201ENST00000428618 249 ntBASIC2.17□□□□□ -2.06
CCDC144BQ3MJ40 AC015922.2-201ENST00000435593 184 ntBASIC2.17□□□□□ -2.06
CCDC144BQ3MJ40 AC245517.4-201ENST00000448601 281 ntBASIC2.17□□□□□ -2.06
CCDC144BQ3MJ40 RNU6-138P-201ENST00000515952 107 ntBASIC2.17□□□□□ -2.06
CCDC144BQ3MJ40 RNU6-365P-201ENST00000517113 106 ntBASIC2.17□□□□□ -2.06
CCDC144BQ3MJ40 CBX3P4-201ENST00000538909 354 ntBASIC2.17□□□□□ -2.06
CCDC144BQ3MJ40 AL160236.1-201ENST00000556317 195 ntBASIC2.17□□□□□ -2.06
CCDC144BQ3MJ40 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC144BQ3MJ40 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC144BQ3MJ40 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC144BQ3MJ40 RNU6-918P-201ENST00000391219 106 ntBASIC2.16□□□□□ -2.06
CCDC144BQ3MJ40 AC072026.1-201ENST00000605023 201 ntBASIC2.16□□□□□ -2.06
CCDC144BQ3MJ40 RNU2-4P-201ENST00000606190 192 ntBASIC2.16□□□□□ -2.06
CCDC144BQ3MJ40 AC090425.1-201ENST00000610007 140 ntBASIC2.16□□□□□ -2.06
CCDC144BQ3MJ40 AC106754.2-201ENST00000623006 233 ntBASIC2.16□□□□□ -2.06
CCDC144BQ3MJ40 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC144BQ3MJ40 RNU6-268P-201ENST00000364174 107 ntBASIC2.15□□□□□ -2.07
CCDC144BQ3MJ40 AL451046.2-201ENST00000403074 277 ntBASIC2.15□□□□□ -2.07
CCDC144BQ3MJ40 RNU2-70P-201ENST00000410718 179 ntBASIC2.15□□□□□ -2.07
CCDC144BQ3MJ40 AC108059.2-201ENST00000434626 151 ntBASIC2.15□□□□□ -2.07
CCDC144BQ3MJ40 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC144BQ3MJ40 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC144BQ3MJ40 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CCDC144BQ3MJ40 Y_RNA.4-201ENST00000362333 112 ntBASIC2.14□□□□□ -2.07
CCDC144BQ3MJ40 Y_RNA.182-201ENST00000363880 111 ntBASIC2.14□□□□□ -2.07
CCDC144BQ3MJ40 RNU4-43P-201ENST00000410628 137 ntBASIC2.14□□□□□ -2.07
CCDC144BQ3MJ40 SNRPGP14-201ENST00000435400 219 ntBASIC2.14□□□□□ -2.07
CCDC144BQ3MJ40 AC027119.1-201ENST00000440877 241 ntBASIC2.14□□□□□ -2.07
CCDC144BQ3MJ40 AL121914.1-201ENST00000450188 156 ntBASIC2.14□□□□□ -2.07
CCDC144BQ3MJ40 SNRPGP8-201ENST00000454064 226 ntBASIC2.14□□□□□ -2.07
CCDC144BQ3MJ40 RNA5SP445-201ENST00000515889 115 ntBASIC2.14□□□□□ -2.07
CCDC144BQ3MJ40 RNU6-830P-201ENST00000516353 107 ntBASIC2.14□□□□□ -2.07
CCDC144BQ3MJ40 RNU6-504P-201ENST00000516568 104 ntBASIC2.14□□□□□ -2.07
CCDC144BQ3MJ40 AC109810.1-201ENST00000534066 224 ntBASIC2.14□□□□□ -2.07
CCDC144BQ3MJ40 MIR3937-201ENST00000580135 106 ntBASIC2.14□□□□□ -2.07
CCDC144BQ3MJ40 Y_RNA.75-201ENST00000362927 97 ntBASIC2.13□□□□□ -2.07
CCDC144BQ3MJ40 Y_RNA.164-201ENST00000363709 102 ntBASIC2.13□□□□□ -2.07
CCDC144BQ3MJ40 Y_RNA.486-201ENST00000384398 107 ntBASIC2.13□□□□□ -2.07
CCDC144BQ3MJ40 Y_RNA.622-201ENST00000411091 108 ntBASIC2.13□□□□□ -2.07
CCDC144BQ3MJ40 RNU6-182P-201ENST00000516970 105 ntBASIC2.13□□□□□ -2.07
CCDC144BQ3MJ40 SNORA81.3-201ENST00000517283 198 ntBASIC2.13□□□□□ -2.07
CCDC144BQ3MJ40 AC090142.3-201ENST00000519012 385 ntBASIC2.13□□□□□ -2.07
CCDC144BQ3MJ40 AP002392.1-201ENST00000537692 208 ntBASIC2.13□□□□□ -2.07
CCDC144BQ3MJ40 MIR4498-201ENST00000577599 66 ntBASIC2.13□□□□□ -2.07
CCDC144BQ3MJ40 FAM106DP-201ENST00000586416 501 ntBASIC2.13□□□□□ -2.07
CCDC144BQ3MJ40 AC108706.1-201ENST00000611053 297 ntBASIC2.13□□□□□ -2.07
CCDC144BQ3MJ40 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.13□□□□□ -2.07
CCDC144BQ3MJ40 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CCDC144BQ3MJ40 SNORD45.3-201ENST00000363836 72 ntBASIC2.12□□□□□ -2.07
CCDC144BQ3MJ40 Y_RNA.233-201ENST00000364407 101 ntBASIC2.12□□□□□ -2.07
CCDC144BQ3MJ40 RNU6-484P-201ENST00000384016 107 ntBASIC2.12□□□□□ -2.07
CCDC144BQ3MJ40 MIR9-3-201ENST00000385084 90 ntBASIC2.12□□□□□ -2.07
CCDC144BQ3MJ40 AC092991.1-201ENST00000477176 376 ntBASIC2.12□□□□□ -2.07
CCDC144BQ3MJ40 AC108729.3-201ENST00000513484 108 ntBASIC2.12□□□□□ -2.07
CCDC144BQ3MJ40 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.12□□□□□ -2.07
CCDC144BQ3MJ40 MRPS18CP4-201ENST00000535821 231 ntBASIC2.12□□□□□ -2.07
CCDC144BQ3MJ40 AL357312.1-201ENST00000603879 298 ntBASIC2.12□□□□□ -2.07
CCDC144BQ3MJ40 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.11□□□□□ -2.07
CCDC144BQ3MJ40 RNU6-275P-201ENST00000364910 107 ntBASIC2.11□□□□□ -2.07
CCDC144BQ3MJ40 RNA5SP190-201ENST00000365222 118 ntBASIC2.11□□□□□ -2.07
CCDC144BQ3MJ40 RNU6-47P-201ENST00000383866 107 ntBASIC2.11□□□□□ -2.07
CCDC144BQ3MJ40 SNORD24-201ENST00000383884 75 ntBASIC2.11□□□□□ -2.07
CCDC144BQ3MJ40 SNRPGP13-201ENST00000442212 177 ntBASIC2.11□□□□□ -2.07
CCDC144BQ3MJ40 SNORD13-201ENST00000459299 104 ntBASIC2.11□□□□□ -2.07
CCDC144BQ3MJ40 RPL30P7-201ENST00000479312 323 ntBASIC2.11□□□□□ -2.07
CCDC144BQ3MJ40 RNU6-917P-201ENST00000516294 104 ntBASIC2.11□□□□□ -2.07
CCDC144BQ3MJ40 SNORA25.15-201ENST00000516487 89 ntBASIC2.11□□□□□ -2.07
CCDC144BQ3MJ40 RNU6-197P-201ENST00000516680 100 ntBASIC2.11□□□□□ -2.07
CCDC144BQ3MJ40 MIR3683-201ENST00000580847 82 ntBASIC2.11□□□□□ -2.07
CCDC144BQ3MJ40 AL365434.2-201ENST00000607979 234 ntBASIC2.11□□□□□ -2.07
CCDC144BQ3MJ40 AC084768.2-201ENST00000622736 221 ntBASIC2.11□□□□□ -2.07
CCDC144BQ3MJ40 RNU6-312P-201ENST00000364629 107 ntBASIC2.1□□□□□ -2.07
CCDC144BQ3MJ40 SNORD48-201ENST00000364953 64 ntBASIC2.1□□□□□ -2.07
CCDC144BQ3MJ40 MIR526A1-201ENST00000384897 85 ntBASIC2.1□□□□□ -2.07
CCDC144BQ3MJ40 RNA5SP247-201ENST00000411181 105 ntBASIC2.1□□□□□ -2.07
CCDC144BQ3MJ40 AC012493.3-201ENST00000604494 112 ntBASIC2.1□□□□□ -2.07
CCDC144BQ3MJ40 MIR8081-201ENST00000611533 95 ntBASIC2.1□□□□□ -2.07
CCDC144BQ3MJ40 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CCDC144BQ3MJ40 AL442644.1-201ENST00000454390 3105 ntBASIC2.09□□□□□ -2.07
CCDC144BQ3MJ40 Y_RNA.634-201ENST00000364811 113 ntBASIC2.09□□□□□ -2.07
CCDC144BQ3MJ40 MIR516B2-201ENST00000385190 85 ntBASIC2.09□□□□□ -2.07
CCDC144BQ3MJ40 AL627390.1-201ENST00000396055 340 ntBASIC2.09□□□□□ -2.07
CCDC144BQ3MJ40 RNU7-120P-201ENST00000459334 63 ntBASIC2.09□□□□□ -2.07
CCDC144BQ3MJ40 RPS29P11-201ENST00000496507 171 ntBASIC2.09□□□□□ -2.07
CCDC144BQ3MJ40 RNU6-902P-201ENST00000517212 91 ntBASIC2.09□□□□□ -2.07
CCDC144BQ3MJ40 AC097639.2-201ENST00000603159 172 ntBASIC2.09□□□□□ -2.07
CCDC144BQ3MJ40 GHRLOS.1-201ENST00000610995 70 ntBASIC2.09□□□□□ -2.07
CCDC144BQ3MJ40 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
CCDC144BQ3MJ40 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
CCDC144BQ3MJ40 MTND5P15-201ENST00000434246 349 ntBASIC2.08□□□□□ -2.08
CCDC144BQ3MJ40 RNU6-1053P-201ENST00000515930 101 ntBASIC2.08□□□□□ -2.08
CCDC144BQ3MJ40 RNU6-250P-201ENST00000516958 103 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms