Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 AC021753.1-201ENST00000635724 168 ntBASIC1.35□□□□□ -2.19
SNAI3Q3KNW1 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
SNAI3Q3KNW1 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
SNAI3Q3KNW1 ICE2P2-201ENST00000483823 2787 ntBASIC1.34□□□□□ -2.19
SNAI3Q3KNW1 MIRLET7C-201ENST00000362160 84 ntBASIC1.34□□□□□ -2.19
SNAI3Q3KNW1 SNORD68-201ENST00000363214 84 ntBASIC1.34□□□□□ -2.19
SNAI3Q3KNW1 SNORD50B-201ENST00000364995 70 ntBASIC1.34□□□□□ -2.19
SNAI3Q3KNW1 RNA5SP190-201ENST00000365222 118 ntBASIC1.34□□□□□ -2.19
SNAI3Q3KNW1 RNU6-643P-201ENST00000384018 107 ntBASIC1.34□□□□□ -2.19
SNAI3Q3KNW1 Y_RNA.432-201ENST00000384087 111 ntBASIC1.34□□□□□ -2.19
SNAI3Q3KNW1 Y_RNA.486-201ENST00000384398 107 ntBASIC1.34□□□□□ -2.19
SNAI3Q3KNW1 RNU6-1031P-201ENST00000384773 107 ntBASIC1.34□□□□□ -2.19
SNAI3Q3KNW1 MIR1323-201ENST00000408090 73 ntBASIC1.34□□□□□ -2.19
SNAI3Q3KNW1 MLLT10P1-201ENST00000418346 262 ntBASIC1.34□□□□□ -2.19
SNAI3Q3KNW1 SUMO1P3-201ENST00000439961 304 ntBASIC1.34□□□□□ -2.19
SNAI3Q3KNW1 RNU6-1299P-201ENST00000516316 100 ntBASIC1.34□□□□□ -2.19
SNAI3Q3KNW1 RNA5SP153-201ENST00000516498 76 ntBASIC1.34□□□□□ -2.19
SNAI3Q3KNW1 RNA5SP481-201ENST00000516814 122 ntBASIC1.34□□□□□ -2.19
SNAI3Q3KNW1 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.34□□□□□ -2.19
SNAI3Q3KNW1 MIR4662B-201ENST00000579498 81 ntBASIC1.34□□□□□ -2.19
SNAI3Q3KNW1 AC097639.2-201ENST00000603159 172 ntBASIC1.34□□□□□ -2.19
SNAI3Q3KNW1 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.34□□□□□ -2.19
SNAI3Q3KNW1 AC095038.3-201ENST00000634439 195 ntBASIC1.34□□□□□ -2.19
SNAI3Q3KNW1 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
SNAI3Q3KNW1 Y_RNA.170-201ENST00000363746 110 ntBASIC1.33□□□□□ -2.2
SNAI3Q3KNW1 SNORD72-201ENST00000390994 80 ntBASIC1.33□□□□□ -2.2
SNAI3Q3KNW1 RNU1-78P-201ENST00000391248 165 ntBASIC1.33□□□□□ -2.2
SNAI3Q3KNW1 AL603908.1-201ENST00000406098 201 ntBASIC1.33□□□□□ -2.2
SNAI3Q3KNW1 AL034345.1-201ENST00000407768 123 ntBASIC1.33□□□□□ -2.2
SNAI3Q3KNW1 SNORD13-201ENST00000459299 104 ntBASIC1.33□□□□□ -2.2
SNAI3Q3KNW1 AC107027.2-201ENST00000512197 115 ntBASIC1.33□□□□□ -2.2
SNAI3Q3KNW1 RNU6-197P-201ENST00000516680 100 ntBASIC1.33□□□□□ -2.2
SNAI3Q3KNW1 RNU6-126P-201ENST00000516685 103 ntBASIC1.33□□□□□ -2.2
SNAI3Q3KNW1 MTND5P41-201ENST00000517498 206 ntBASIC1.33□□□□□ -2.2
SNAI3Q3KNW1 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.33□□□□□ -2.2
SNAI3Q3KNW1 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
SNAI3Q3KNW1 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SNAI3Q3KNW1 Y_RNA.634-201ENST00000364811 113 ntBASIC1.32□□□□□ -2.2
SNAI3Q3KNW1 RNU6-1130P-201ENST00000365434 107 ntBASIC1.32□□□□□ -2.2
SNAI3Q3KNW1 Y_RNA.398-201ENST00000383952 99 ntBASIC1.32□□□□□ -2.2
SNAI3Q3KNW1 RNU6-746P-201ENST00000384112 109 ntBASIC1.32□□□□□ -2.2
SNAI3Q3KNW1 Y_RNA.506-201ENST00000384494 102 ntBASIC1.32□□□□□ -2.2
SNAI3Q3KNW1 MIR320A-201ENST00000385302 82 ntBASIC1.32□□□□□ -2.2
SNAI3Q3KNW1 AC006461.1-201ENST00000412637 326 ntBASIC1.32□□□□□ -2.2
SNAI3Q3KNW1 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.32□□□□□ -2.2
SNAI3Q3KNW1 snoU13.27-201ENST00000459278 104 ntBASIC1.32□□□□□ -2.2
SNAI3Q3KNW1 AC099513.1-201ENST00000490423 301 ntBASIC1.32□□□□□ -2.2
SNAI3Q3KNW1 RNU7-200P-201ENST00000516105 62 ntBASIC1.32□□□□□ -2.2
SNAI3Q3KNW1 SNORD45.4-201ENST00000516629 73 ntBASIC1.32□□□□□ -2.2
SNAI3Q3KNW1 MIR378D2-201ENST00000580636 98 ntBASIC1.32□□□□□ -2.2
SNAI3Q3KNW1 WWP1P1-201ENST00000466609 2769 ntBASIC1.32□□□□□ -2.2
SNAI3Q3KNW1 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.32□□□□□ -2.2
SNAI3Q3KNW1 AL442644.1-201ENST00000454390 3105 ntBASIC1.31□□□□□ -2.2
SNAI3Q3KNW1 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SNAI3Q3KNW1 Y_RNA.8-201ENST00000362353 102 ntBASIC1.31□□□□□ -2.2
SNAI3Q3KNW1 Y_RNA.91-201ENST00000363042 107 ntBASIC1.31□□□□□ -2.2
SNAI3Q3KNW1 Y_RNA.242-201ENST00000364473 110 ntBASIC1.31□□□□□ -2.2
SNAI3Q3KNW1 SNORD1A-201ENST00000364968 72 ntBASIC1.31□□□□□ -2.2
SNAI3Q3KNW1 Y_RNA.337-201ENST00000365312 102 ntBASIC1.31□□□□□ -2.2
SNAI3Q3KNW1 RNY1P5-201ENST00000383890 115 ntBASIC1.31□□□□□ -2.2
SNAI3Q3KNW1 RNU6-449P-201ENST00000383914 107 ntBASIC1.31□□□□□ -2.2
SNAI3Q3KNW1 RNU6-424P-201ENST00000384367 105 ntBASIC1.31□□□□□ -2.2
SNAI3Q3KNW1 RNU6-125P-201ENST00000384505 107 ntBASIC1.31□□□□□ -2.2
SNAI3Q3KNW1 U8.16-201ENST00000391279 133 ntBASIC1.31□□□□□ -2.2
SNAI3Q3KNW1 MIR1304-201ENST00000408243 91 ntBASIC1.31□□□□□ -2.2
SNAI3Q3KNW1 SNORA79-201ENST00000408376 140 ntBASIC1.31□□□□□ -2.2
SNAI3Q3KNW1 RNU6-955P-201ENST00000410497 104 ntBASIC1.31□□□□□ -2.2
SNAI3Q3KNW1 RPL30P13-201ENST00000418873 348 ntBASIC1.31□□□□□ -2.2
SNAI3Q3KNW1 CALM2P4-201ENST00000430810 426 ntBASIC1.31□□□□□ -2.2
SNAI3Q3KNW1 SNRPGP14-201ENST00000435400 219 ntBASIC1.31□□□□□ -2.2
SNAI3Q3KNW1 AC023790.1-201ENST00000482174 347 ntBASIC1.31□□□□□ -2.2
SNAI3Q3KNW1 RNA5SP168-201ENST00000516642 112 ntBASIC1.31□□□□□ -2.2
SNAI3Q3KNW1 RNU6-1116P-201ENST00000517269 99 ntBASIC1.31□□□□□ -2.2
SNAI3Q3KNW1 AC019176.1-201ENST00000518519 225 ntBASIC1.31□□□□□ -2.2
SNAI3Q3KNW1 MIR4709-201ENST00000577272 72 ntBASIC1.31□□□□□ -2.2
SNAI3Q3KNW1 AC021506.2-201ENST00000612354 169 ntBASIC1.31□□□□□ -2.2
SNAI3Q3KNW1 AC027279.3-201ENST00000625055 122 ntBASIC1.31□□□□□ -2.2
SNAI3Q3KNW1 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SNAI3Q3KNW1 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SNAI3Q3KNW1 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SNAI3Q3KNW1 RNU6-1084P-201ENST00000362498 107 ntBASIC1.3□□□□□ -2.2
SNAI3Q3KNW1 Y_RNA.66-201ENST00000362862 102 ntBASIC1.3□□□□□ -2.2
SNAI3Q3KNW1 RNU6-978P-201ENST00000364371 103 ntBASIC1.3□□□□□ -2.2
SNAI3Q3KNW1 snoU2-30.1-201ENST00000365012 70 ntBASIC1.3□□□□□ -2.2
SNAI3Q3KNW1 Y_RNA.336-201ENST00000365307 109 ntBASIC1.3□□□□□ -2.2
SNAI3Q3KNW1 SNORD116-18-201ENST00000383961 92 ntBASIC1.3□□□□□ -2.2
SNAI3Q3KNW1 SNORA26-201ENST00000391286 122 ntBASIC1.3□□□□□ -2.2
SNAI3Q3KNW1 MIR548M-201ENST00000408260 86 ntBASIC1.3□□□□□ -2.2
SNAI3Q3KNW1 RNU2-70P-201ENST00000410718 179 ntBASIC1.3□□□□□ -2.2
SNAI3Q3KNW1 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.3□□□□□ -2.2
SNAI3Q3KNW1 CYCTP-201ENST00000504253 315 ntBASIC1.3□□□□□ -2.2
SNAI3Q3KNW1 AC114811.1-201ENST00000507207 168 ntBASIC1.3□□□□□ -2.2
SNAI3Q3KNW1 AC120024.3-201ENST00000603167 156 ntBASIC1.3□□□□□ -2.2
SNAI3Q3KNW1 AC006441.5-201ENST00000612680 209 ntBASIC1.3□□□□□ -2.2
SNAI3Q3KNW1 RNU6-774P-201ENST00000363238 107 ntBASIC1.29□□□□□ -2.2
SNAI3Q3KNW1 SNORD14E-201ENST00000364009 85 ntBASIC1.29□□□□□ -2.2
SNAI3Q3KNW1 RNU6-818P-201ENST00000364837 108 ntBASIC1.29□□□□□ -2.2
SNAI3Q3KNW1 RNU6-597P-201ENST00000365620 102 ntBASIC1.29□□□□□ -2.2
SNAI3Q3KNW1 RNU6-203P-201ENST00000384038 104 ntBASIC1.29□□□□□ -2.2
SNAI3Q3KNW1 MIR517C-201ENST00000385103 95 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 170 ms