Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 AC023449.1-201ENST00000454464 154 ntBASIC2.09□□□□□ -2.07
ATP2B3Q16720 AL096840.1-201ENST00000603287 93 ntBASIC2.09□□□□□ -2.07
ATP2B3Q16720 MIR502-201ENST00000606349 86 ntBASIC2.09□□□□□ -2.07
ATP2B3Q16720 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.09□□□□□ -2.07
ATP2B3Q16720 SNORD48-201ENST00000364953 64 ntBASIC2.08□□□□□ -2.08
ATP2B3Q16720 RNU6-439P-201ENST00000384188 106 ntBASIC2.08□□□□□ -2.08
ATP2B3Q16720 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
ATP2B3Q16720 RNU4-43P-201ENST00000410628 137 ntBASIC2.08□□□□□ -2.08
ATP2B3Q16720 RNU2-70P-201ENST00000410718 179 ntBASIC2.08□□□□□ -2.08
ATP2B3Q16720 FTH1P12-201ENST00000432137 551 ntBASIC2.08□□□□□ -2.08
ATP2B3Q16720 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.08□□□□□ -2.08
ATP2B3Q16720 AC069257.2-201ENST00000441819 155 ntBASIC2.08□□□□□ -2.08
ATP2B3Q16720 AC099513.1-201ENST00000490423 301 ntBASIC2.08□□□□□ -2.08
ATP2B3Q16720 AC114811.1-201ENST00000507207 168 ntBASIC2.08□□□□□ -2.08
ATP2B3Q16720 RNU6-197P-201ENST00000516680 100 ntBASIC2.08□□□□□ -2.08
ATP2B3Q16720 MIR4299-201ENST00000577899 72 ntBASIC2.08□□□□□ -2.08
ATP2B3Q16720 RNU6-1084P-201ENST00000362498 107 ntBASIC2.07□□□□□ -2.08
ATP2B3Q16720 RNU4-11P-201ENST00000365287 132 ntBASIC2.07□□□□□ -2.08
ATP2B3Q16720 RNU6-449P-201ENST00000383914 107 ntBASIC2.07□□□□□ -2.08
ATP2B3Q16720 RNU6-1031P-201ENST00000384773 107 ntBASIC2.07□□□□□ -2.08
ATP2B3Q16720 RNA5SP482-201ENST00000391269 118 ntBASIC2.07□□□□□ -2.08
ATP2B3Q16720 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.07□□□□□ -2.08
ATP2B3Q16720 AL603825.1-201ENST00000438481 80 ntBASIC2.07□□□□□ -2.08
ATP2B3Q16720 snoU13.27-201ENST00000459278 104 ntBASIC2.07□□□□□ -2.08
ATP2B3Q16720 Y_RNA.666-201ENST00000516187 112 ntBASIC2.07□□□□□ -2.08
ATP2B3Q16720 RNU6-1270P-201ENST00000517128 108 ntBASIC2.07□□□□□ -2.08
ATP2B3Q16720 MIR3618-201ENST00000580330 88 ntBASIC2.07□□□□□ -2.08
ATP2B3Q16720 MIR4762-201ENST00000585261 75 ntBASIC2.07□□□□□ -2.08
ATP2B3Q16720 AC120024.3-201ENST00000603167 156 ntBASIC2.07□□□□□ -2.08
ATP2B3Q16720 AC021506.2-201ENST00000612354 169 ntBASIC2.07□□□□□ -2.08
ATP2B3Q16720 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
ATP2B3Q16720 U8.5-201ENST00000364528 136 ntBASIC2.06□□□□□ -2.08
ATP2B3Q16720 RNA5SP363-201ENST00000365072 115 ntBASIC2.06□□□□□ -2.08
ATP2B3Q16720 RNU6-1138P-201ENST00000365359 106 ntBASIC2.06□□□□□ -2.08
ATP2B3Q16720 Y_RNA.521-201ENST00000384560 114 ntBASIC2.06□□□□□ -2.08
ATP2B3Q16720 RN7SKP200-201ENST00000410564 320 ntBASIC2.06□□□□□ -2.08
ATP2B3Q16720 AC093850.1-201ENST00000454121 251 ntBASIC2.06□□□□□ -2.08
ATP2B3Q16720 AC005840.1-201ENST00000498412 377 ntBASIC2.06□□□□□ -2.08
ATP2B3Q16720 RNU7-121P-201ENST00000516604 62 ntBASIC2.06□□□□□ -2.08
ATP2B3Q16720 SNORD45.4-201ENST00000516629 73 ntBASIC2.06□□□□□ -2.08
ATP2B3Q16720 RNA5SP168-201ENST00000516642 112 ntBASIC2.06□□□□□ -2.08
ATP2B3Q16720 MIR4709-201ENST00000577272 72 ntBASIC2.06□□□□□ -2.08
ATP2B3Q16720 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.06□□□□□ -2.08
ATP2B3Q16720 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.06□□□□□ -2.08
ATP2B3Q16720 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
ATP2B3Q16720 Y_RNA.66-201ENST00000362862 102 ntBASIC2.05□□□□□ -2.08
ATP2B3Q16720 Y_RNA.140-201ENST00000363474 103 ntBASIC2.05□□□□□ -2.08
ATP2B3Q16720 RNU6-457P-201ENST00000363999 107 ntBASIC2.05□□□□□ -2.08
ATP2B3Q16720 RNU6-1082P-201ENST00000364574 107 ntBASIC2.05□□□□□ -2.08
ATP2B3Q16720 RNU6-746P-201ENST00000384112 109 ntBASIC2.05□□□□□ -2.08
ATP2B3Q16720 RNU6-163P-201ENST00000384396 106 ntBASIC2.05□□□□□ -2.08
ATP2B3Q16720 Y_RNA.580-201ENST00000391004 95 ntBASIC2.05□□□□□ -2.08
ATP2B3Q16720 SNORA79-201ENST00000408376 140 ntBASIC2.05□□□□□ -2.08
ATP2B3Q16720 Y_RNA.703-201ENST00000516846 111 ntBASIC2.05□□□□□ -2.08
ATP2B3Q16720 MIR4778-201ENST00000577635 80 ntBASIC2.05□□□□□ -2.08
ATP2B3Q16720 MIR378D2-201ENST00000580636 98 ntBASIC2.05□□□□□ -2.08
ATP2B3Q16720 MIR4713-201ENST00000582691 75 ntBASIC2.05□□□□□ -2.08
ATP2B3Q16720 RNU6-978P-201ENST00000364371 103 ntBASIC2.04□□□□□ -2.08
ATP2B3Q16720 Y_RNA.337-201ENST00000365312 102 ntBASIC2.04□□□□□ -2.08
ATP2B3Q16720 RNU6-424P-201ENST00000384367 105 ntBASIC2.04□□□□□ -2.08
ATP2B3Q16720 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
ATP2B3Q16720 RPL31P63-201ENST00000422565 375 ntBASIC2.04□□□□□ -2.08
ATP2B3Q16720 AC108667.1-201ENST00000428618 249 ntBASIC2.04□□□□□ -2.08
ATP2B3Q16720 RNA5SP458-201ENST00000516188 119 ntBASIC2.04□□□□□ -2.08
ATP2B3Q16720 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.04□□□□□ -2.08
ATP2B3Q16720 DNAJC19P2-201ENST00000593340 302 ntBASIC2.04□□□□□ -2.08
ATP2B3Q16720 AP000942.3-201ENST00000603702 160 ntBASIC2.04□□□□□ -2.08
ATP2B3Q16720 Y_RNA.778-201ENST00000620203 90 ntBASIC2.04□□□□□ -2.08
ATP2B3Q16720 AC095038.3-201ENST00000634439 195 ntBASIC2.04□□□□□ -2.08
ATP2B3Q16720 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
ATP2B3Q16720 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
ATP2B3Q16720 snoU2-30.1-201ENST00000365012 70 ntBASIC2.03□□□□□ -2.08
ATP2B3Q16720 RNU6-203P-201ENST00000384038 104 ntBASIC2.03□□□□□ -2.08
ATP2B3Q16720 SNORA1-201ENST00000384107 130 ntBASIC2.03□□□□□ -2.08
ATP2B3Q16720 SNORD61-201ENST00000384252 73 ntBASIC2.03□□□□□ -2.08
ATP2B3Q16720 SNORA20-201ENST00000384662 132 ntBASIC2.03□□□□□ -2.08
ATP2B3Q16720 MIR548A2-201ENST00000384956 97 ntBASIC2.03□□□□□ -2.08
ATP2B3Q16720 MIR802-201ENST00000390235 94 ntBASIC2.03□□□□□ -2.08
ATP2B3Q16720 AL034345.1-201ENST00000407768 123 ntBASIC2.03□□□□□ -2.08
ATP2B3Q16720 RNU6-588P-201ENST00000410281 105 ntBASIC2.03□□□□□ -2.08
ATP2B3Q16720 RNU2-55P-201ENST00000411146 174 ntBASIC2.03□□□□□ -2.08
ATP2B3Q16720 SNORA25.12-201ENST00000516202 82 ntBASIC2.03□□□□□ -2.08
ATP2B3Q16720 RNU7-28P-201ENST00000516759 62 ntBASIC2.03□□□□□ -2.08
ATP2B3Q16720 AC007751.1-201ENST00000529260 376 ntBASIC2.03□□□□□ -2.08
ATP2B3Q16720 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.03□□□□□ -2.08
ATP2B3Q16720 AC022254.1-201ENST00000567857 235 ntBASIC2.03□□□□□ -2.08
ATP2B3Q16720 SNORA28-201ENST00000606769 126 ntBASIC2.03□□□□□ -2.08
ATP2B3Q16720 SNORD14E-201ENST00000364009 85 ntBASIC2.02□□□□□ -2.09
ATP2B3Q16720 SNORD37.2-201ENST00000391075 66 ntBASIC2.02□□□□□ -2.09
ATP2B3Q16720 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.02□□□□□ -2.09
ATP2B3Q16720 SNRPGP14-201ENST00000435400 219 ntBASIC2.02□□□□□ -2.09
ATP2B3Q16720 RNU6-426P-201ENST00000516464 97 ntBASIC2.02□□□□□ -2.09
ATP2B3Q16720 AC097639.2-201ENST00000603159 172 ntBASIC2.02□□□□□ -2.09
ATP2B3Q16720 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
ATP2B3Q16720 RNU6-268P-201ENST00000364174 107 ntBASIC2.01□□□□□ -2.09
ATP2B3Q16720 Y_RNA.215-201ENST00000364204 112 ntBASIC2.01□□□□□ -2.09
ATP2B3Q16720 Y_RNA.393-201ENST00000383936 102 ntBASIC2.01□□□□□ -2.09
ATP2B3Q16720 Y_RNA.400-201ENST00000383963 111 ntBASIC2.01□□□□□ -2.09
ATP2B3Q16720 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.01□□□□□ -2.09
ATP2B3Q16720 RNU7-12P-201ENST00000516030 62 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms