Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 SCARNA24.1-201ENST00000516465 137 ntBASIC-1.35□□□□□ -2.62
HMGXB3Q12766 AC064836.2-201ENST00000609491 462 ntBASIC-1.35□□□□□ -2.62
HMGXB3Q12766 AL662814.1-201ENST00000617364 121 ntBASIC-1.35□□□□□ -2.62
HMGXB3Q12766 AC072046.2-201ENST00000618366 268 ntBASIC-1.35□□□□□ -2.62
HMGXB3Q12766 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.35□□□□□ -2.62
HMGXB3Q12766 SNORD115-34-201ENST00000362441 82 ntBASIC-1.35□□□□□ -2.63
HMGXB3Q12766 SNORD115-12-201ENST00000362583 82 ntBASIC-1.35□□□□□ -2.63
HMGXB3Q12766 SNORD115-29-201ENST00000362834 82 ntBASIC-1.35□□□□□ -2.63
HMGXB3Q12766 SNORD115-9-201ENST00000362912 82 ntBASIC-1.35□□□□□ -2.63
HMGXB3Q12766 SNORD115-21-201ENST00000362963 81 ntBASIC-1.35□□□□□ -2.63
HMGXB3Q12766 SNORD115-14-201ENST00000363090 81 ntBASIC-1.35□□□□□ -2.63
HMGXB3Q12766 SNORD115-13-201ENST00000363358 82 ntBASIC-1.35□□□□□ -2.63
HMGXB3Q12766 SNORA63.5-201ENST00000363548 123 ntBASIC-1.35□□□□□ -2.63
HMGXB3Q12766 SNORD115-11-201ENST00000363616 82 ntBASIC-1.35□□□□□ -2.63
HMGXB3Q12766 SNORD115-5-201ENST00000363633 82 ntBASIC-1.35□□□□□ -2.63
HMGXB3Q12766 SNORD115-39-201ENST00000363694 82 ntBASIC-1.35□□□□□ -2.63
HMGXB3Q12766 SNORD115-4-201ENST00000363810 82 ntBASIC-1.35□□□□□ -2.63
HMGXB3Q12766 SNORD115-16-201ENST00000363887 82 ntBASIC-1.35□□□□□ -2.63
HMGXB3Q12766 SNORD115-6-201ENST00000363942 82 ntBASIC-1.35□□□□□ -2.63
HMGXB3Q12766 SNORD115-42-201ENST00000364273 82 ntBASIC-1.35□□□□□ -2.63
HMGXB3Q12766 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.35□□□□□ -2.63
HMGXB3Q12766 SNORD115-15-201ENST00000364809 81 ntBASIC-1.35□□□□□ -2.63
HMGXB3Q12766 SNORD115-1-201ENST00000364961 82 ntBASIC-1.35□□□□□ -2.63
HMGXB3Q12766 SNORD115-26-201ENST00000365067 82 ntBASIC-1.35□□□□□ -2.63
HMGXB3Q12766 SNORD115-10-201ENST00000365073 81 ntBASIC-1.35□□□□□ -2.63
HMGXB3Q12766 SNORD115-43-201ENST00000365503 82 ntBASIC-1.35□□□□□ -2.63
HMGXB3Q12766 SNORD115-36-201ENST00000365629 82 ntBASIC-1.35□□□□□ -2.63
HMGXB3Q12766 RNU6-431P-201ENST00000383874 107 ntBASIC-1.35□□□□□ -2.63
HMGXB3Q12766 SNORD24-201ENST00000383884 75 ntBASIC-1.35□□□□□ -2.63
HMGXB3Q12766 RNU6-1264P-201ENST00000383891 107 ntBASIC-1.35□□□□□ -2.63
HMGXB3Q12766 MIR517B-201ENST00000385102 67 ntBASIC-1.35□□□□□ -2.63
HMGXB3Q12766 RPL30P16-201ENST00000419341 429 ntBASIC-1.35□□□□□ -2.63
HMGXB3Q12766 RNU7-55P-201ENST00000459426 62 ntBASIC-1.35□□□□□ -2.63
HMGXB3Q12766 SNORD22.1-201ENST00000516331 125 ntBASIC-1.35□□□□□ -2.63
HMGXB3Q12766 Y_RNA.683-201ENST00000516508 93 ntBASIC-1.35□□□□□ -2.63
HMGXB3Q12766 SNORD115-40-201ENST00000606510 82 ntBASIC-1.35□□□□□ -2.63
HMGXB3Q12766 AP001282.2-201ENST00000616149 309 ntBASIC-1.35□□□□□ -2.63
HMGXB3Q12766 SEPT14P19-203ENST00000633205 211 ntBASIC-1.35□□□□□ -2.63
HMGXB3Q12766 MIR382-201ENST00000637119 76 ntBASIC-1.35□□□□□ -2.63
HMGXB3Q12766 AC099654.12-201ENST00000639868 649 ntBASIC-1.35□□□□□ -2.63
HMGXB3Q12766 RNU6-454P-201ENST00000364292 107 ntBASIC-1.36□□□□□ -2.63
HMGXB3Q12766 MIR539-201ENST00000365690 78 ntBASIC-1.36□□□□□ -2.63
HMGXB3Q12766 MIR147A-201ENST00000385079 72 ntBASIC-1.36□□□□□ -2.63
HMGXB3Q12766 AL603914.1-201ENST00000401964 204 ntBASIC-1.36□□□□□ -2.63
HMGXB3Q12766 MTND2P18-201ENST00000419962 1030 ntBASIC-1.36□□□□□ -2.63
HMGXB3Q12766 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.36□□□□□ -2.63
HMGXB3Q12766 AC008507.2-201ENST00000588402 1176 ntBASIC-1.36□□□□□ -2.63
HMGXB3Q12766 AL158050.2-201ENST00000605336 568 ntBASIC-1.36□□□□□ -2.63
HMGXB3Q12766 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.37□□□□□ -2.63
HMGXB3Q12766 SNORA72-201ENST00000384339 132 ntBASIC-1.37□□□□□ -2.63
HMGXB3Q12766 SNORA72.6-201ENST00000384520 129 ntBASIC-1.37□□□□□ -2.63
HMGXB3Q12766 AL590002.1-201ENST00000406554 418 ntBASIC-1.37□□□□□ -2.63
HMGXB3Q12766 USP9YP16-201ENST00000430287 407 ntBASIC-1.37□□□□□ -2.63
HMGXB3Q12766 MTND2P3-201ENST00000452458 470 ntBASIC-1.37□□□□□ -2.63
HMGXB3Q12766 RNU7-104P-201ENST00000459398 79 ntBASIC-1.37□□□□□ -2.63
HMGXB3Q12766 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.37□□□□□ -2.63
HMGXB3Q12766 RNU6-966P-201ENST00000516479 104 ntBASIC-1.37□□□□□ -2.63
HMGXB3Q12766 SNORA25.16-201ENST00000516741 121 ntBASIC-1.37□□□□□ -2.63
HMGXB3Q12766 AC005972.2-201ENST00000604690 348 ntBASIC-1.37□□□□□ -2.63
HMGXB3Q12766 AL354950.2-201ENST00000617939 290 ntBASIC-1.37□□□□□ -2.63
HMGXB3Q12766 RNU6-281P-201ENST00000384212 103 ntBASIC-1.38□□□□□ -2.63
HMGXB3Q12766 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-1.38□□□□□ -2.63
HMGXB3Q12766 Z82188.1-201ENST00000436709 154 ntBASIC-1.38□□□□□ -2.63
HMGXB3Q12766 AP000533.3-201ENST00000447704 118 ntBASIC-1.38□□□□□ -2.63
HMGXB3Q12766 RNU6-1332P-201ENST00000516666 104 ntBASIC-1.38□□□□□ -2.63
HMGXB3Q12766 RNU6-1220P-201ENST00000517126 108 ntBASIC-1.38□□□□□ -2.63
HMGXB3Q12766 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.38□□□□□ -2.63
HMGXB3Q12766 AC138207.3-201ENST00000585289 166 ntBASIC-1.38□□□□□ -2.63
HMGXB3Q12766 AC005771.1-201ENST00000585581 349 ntBASIC-1.38□□□□□ -2.63
HMGXB3Q12766 AL512506.1-201ENST00000613918 449 ntBASIC-1.38□□□□□ -2.63
HMGXB3Q12766 AL158063.1-201ENST00000615349 536 ntBASIC-1.38□□□□□ -2.63
HMGXB3Q12766 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.39□□□□□ -2.63
HMGXB3Q12766 Y_RNA.151-201ENST00000363566 112 ntBASIC-1.39□□□□□ -2.63
HMGXB3Q12766 Y_RNA.608-201ENST00000410647 95 ntBASIC-1.39□□□□□ -2.63
HMGXB3Q12766 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-1.39□□□□□ -2.63
HMGXB3Q12766 DEFB131E-201ENST00000532329 154 ntBASIC-1.39□□□□□ -2.63
HMGXB3Q12766 AC124312.5-201ENST00000604451 268 ntBASIC-1.39□□□□□ -2.63
HMGXB3Q12766 AP000942.4-201ENST00000604811 241 ntBASIC-1.39□□□□□ -2.63
HMGXB3Q12766 RNA5SP93-201ENST00000362525 114 ntBASIC-1.4□□□□□ -2.63
HMGXB3Q12766 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.4□□□□□ -2.63
HMGXB3Q12766 Y_RNA.367-201ENST00000365544 101 ntBASIC-1.4□□□□□ -2.63
HMGXB3Q12766 SNORA40.5-201ENST00000391061 128 ntBASIC-1.4□□□□□ -2.63
HMGXB3Q12766 RPS27AP14-201ENST00000422868 454 ntBASIC-1.4□□□□□ -2.63
HMGXB3Q12766 AC016550.1-201ENST00000505348 785 ntBASIC-1.4□□□□□ -2.63
HMGXB3Q12766 RNA5SP33-201ENST00000516687 98 ntBASIC-1.4□□□□□ -2.63
HMGXB3Q12766 RNU7-53P-201ENST00000516705 60 ntBASIC-1.4□□□□□ -2.63
HMGXB3Q12766 AC008507.4-201ENST00000585464 127 ntBASIC-1.4□□□□□ -2.63
HMGXB3Q12766 AC007671.2-201ENST00000637344 619 ntBASIC-1.4□□□□□ -2.63
HMGXB3Q12766 SNORD50.1-201ENST00000362987 71 ntBASIC-1.4□□□□□ -2.63
HMGXB3Q12766 Y_RNA.242-201ENST00000364473 110 ntBASIC-1.4□□□□□ -2.63
HMGXB3Q12766 RNU1-141P-201ENST00000364623 158 ntBASIC-1.4□□□□□ -2.63
HMGXB3Q12766 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.4□□□□□ -2.63
HMGXB3Q12766 RNU6-949P-201ENST00000384040 107 ntBASIC-1.4□□□□□ -2.63
HMGXB3Q12766 RNU6-74P-201ENST00000384235 107 ntBASIC-1.4□□□□□ -2.63
HMGXB3Q12766 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.4□□□□□ -2.63
HMGXB3Q12766 SNORD116-12-201ENST00000384468 92 ntBASIC-1.4□□□□□ -2.63
HMGXB3Q12766 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.4□□□□□ -2.63
HMGXB3Q12766 RNA5SP237-201ENST00000410414 113 ntBASIC-1.4□□□□□ -2.63
HMGXB3Q12766 UBE2D3P4-201ENST00000441973 436 ntBASIC-1.4□□□□□ -2.63
HMGXB3Q12766 SNORD27.1-201ENST00000516319 72 ntBASIC-1.4□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms