Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 RNU6-125P-201ENST00000384505 107 ntBASIC2.29□□□□□ -2.04
SSRP1Q08945 SNORD37.2-201ENST00000391075 66 ntBASIC2.29□□□□□ -2.04
SSRP1Q08945 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.29□□□□□ -2.04
SSRP1Q08945 MIR548O-201ENST00000408583 114 ntBASIC2.29□□□□□ -2.04
SSRP1Q08945 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SSRP1Q08945 RNU6-1270P-201ENST00000517128 108 ntBASIC2.29□□□□□ -2.04
SSRP1Q08945 SNRPGP19-201ENST00000603826 189 ntBASIC2.29□□□□□ -2.04
SSRP1Q08945 MIR6844-201ENST00000637122 62 ntBASIC2.29□□□□□ -2.04
SSRP1Q08945 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SSRP1Q08945 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SSRP1Q08945 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SSRP1Q08945 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.28□□□□□ -2.04
SSRP1Q08945 RNU6-199P-201ENST00000362954 107 ntBASIC2.28□□□□□ -2.04
SSRP1Q08945 RNU4-11P-201ENST00000365287 132 ntBASIC2.28□□□□□ -2.04
SSRP1Q08945 RNU6-203P-201ENST00000384038 104 ntBASIC2.28□□□□□ -2.04
SSRP1Q08945 MIR1289-2-201ENST00000408360 111 ntBASIC2.28□□□□□ -2.04
SSRP1Q08945 RNA5SP338-201ENST00000410495 85 ntBASIC2.28□□□□□ -2.04
SSRP1Q08945 RNU6-693P-201ENST00000516134 107 ntBASIC2.28□□□□□ -2.04
SSRP1Q08945 AC007751.1-201ENST00000529260 376 ntBASIC2.28□□□□□ -2.04
SSRP1Q08945 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.28□□□□□ -2.04
SSRP1Q08945 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.28□□□□□ -2.04
SSRP1Q08945 AC092881.1-201ENST00000638218 2733 ntBASIC2.27□□□□□ -2.05
SSRP1Q08945 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SSRP1Q08945 AL596028.1-201ENST00000326971 197 ntBASIC2.27□□□□□ -2.05
SSRP1Q08945 RNA5SP138-201ENST00000365098 114 ntBASIC2.27□□□□□ -2.05
SSRP1Q08945 RNU6-439P-201ENST00000384188 106 ntBASIC2.27□□□□□ -2.05
SSRP1Q08945 MIR452-201ENST00000385020 85 ntBASIC2.27□□□□□ -2.05
SSRP1Q08945 SNORA75.5-201ENST00000391291 81 ntBASIC2.27□□□□□ -2.05
SSRP1Q08945 JTBP1-201ENST00000441314 247 ntBASIC2.27□□□□□ -2.05
SSRP1Q08945 snoU13.23-201ENST00000458863 104 ntBASIC2.27□□□□□ -2.05
SSRP1Q08945 MIR4778-201ENST00000577635 80 ntBASIC2.27□□□□□ -2.05
SSRP1Q08945 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SSRP1Q08945 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SSRP1Q08945 MIR194-1-201ENST00000384892 85 ntBASIC2.26□□□□□ -2.05
SSRP1Q08945 AL356379.1-201ENST00000414105 126 ntBASIC2.26□□□□□ -2.05
SSRP1Q08945 AC093850.1-201ENST00000454121 251 ntBASIC2.26□□□□□ -2.05
SSRP1Q08945 AC079804.2-201ENST00000490376 200 ntBASIC2.26□□□□□ -2.05
SSRP1Q08945 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.26□□□□□ -2.05
SSRP1Q08945 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.26□□□□□ -2.05
SSRP1Q08945 AL365205.2-201ENST00000594586 68 ntBASIC2.26□□□□□ -2.05
SSRP1Q08945 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SSRP1Q08945 Y_RNA.215-201ENST00000364204 112 ntBASIC2.25□□□□□ -2.05
SSRP1Q08945 Y_RNA.542-201ENST00000384641 111 ntBASIC2.25□□□□□ -2.05
SSRP1Q08945 MIR548A2-201ENST00000384956 97 ntBASIC2.25□□□□□ -2.05
SSRP1Q08945 MIR518F-201ENST00000384973 87 ntBASIC2.25□□□□□ -2.05
SSRP1Q08945 AC004965.1-201ENST00000413033 213 ntBASIC2.25□□□□□ -2.05
SSRP1Q08945 AL161935.2-201ENST00000414627 60 ntBASIC2.25□□□□□ -2.05
SSRP1Q08945 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.25□□□□□ -2.05
SSRP1Q08945 AL591806.2-201ENST00000433122 173 ntBASIC2.25□□□□□ -2.05
SSRP1Q08945 AC015922.2-201ENST00000435593 184 ntBASIC2.25□□□□□ -2.05
SSRP1Q08945 RNA5SP233-201ENST00000459153 113 ntBASIC2.25□□□□□ -2.05
SSRP1Q08945 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.25□□□□□ -2.05
SSRP1Q08945 RNU6-346P-201ENST00000516288 111 ntBASIC2.25□□□□□ -2.05
SSRP1Q08945 RNU7-25P-201ENST00000516544 62 ntBASIC2.25□□□□□ -2.05
SSRP1Q08945 AC015712.3-201ENST00000559380 164 ntBASIC2.25□□□□□ -2.05
SSRP1Q08945 AC015726.2-201ENST00000620112 122 ntBASIC2.25□□□□□ -2.05
SSRP1Q08945 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.25□□□□□ -2.05
SSRP1Q08945 ZNF355P-201ENST00000427301 3216 ntBASIC2.25□□□□□ -2.05
SSRP1Q08945 AL442644.1-201ENST00000454390 3105 ntBASIC2.24□□□□□ -2.05
SSRP1Q08945 MIR764-201ENST00000390811 85 ntBASIC2.24□□□□□ -2.05
SSRP1Q08945 MIR1267-201ENST00000408723 78 ntBASIC2.24□□□□□ -2.05
SSRP1Q08945 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.24□□□□□ -2.05
SSRP1Q08945 AC090142.3-201ENST00000519012 385 ntBASIC2.24□□□□□ -2.05
SSRP1Q08945 AC112693.2-201ENST00000556538 232 ntBASIC2.24□□□□□ -2.05
SSRP1Q08945 DEFB122-202ENST00000569013 197 ntBASIC2.24□□□□□ -2.05
SSRP1Q08945 AL627230.6-201ENST00000611129 280 ntBASIC2.24□□□□□ -2.05
SSRP1Q08945 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.24□□□□□ -2.05
SSRP1Q08945 AC095038.3-201ENST00000634439 195 ntBASIC2.24□□□□□ -2.05
SSRP1Q08945 ICE2P2-201ENST00000483823 2787 ntBASIC2.24□□□□□ -2.05
SSRP1Q08945 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.23□□□□□ -2.05
SSRP1Q08945 SNORD114-1-201ENST00000362705 72 ntBASIC2.23□□□□□ -2.05
SSRP1Q08945 RNU6-1082P-201ENST00000364574 107 ntBASIC2.23□□□□□ -2.05
SSRP1Q08945 RNU6-818P-201ENST00000364837 108 ntBASIC2.23□□□□□ -2.05
SSRP1Q08945 Y_RNA.488-201ENST00000384403 102 ntBASIC2.23□□□□□ -2.05
SSRP1Q08945 Y_RNA.547-201ENST00000384654 119 ntBASIC2.23□□□□□ -2.05
SSRP1Q08945 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
SSRP1Q08945 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
SSRP1Q08945 RNU6-830P-201ENST00000516353 107 ntBASIC2.23□□□□□ -2.05
SSRP1Q08945 MIR548X2-201ENST00000579776 100 ntBASIC2.23□□□□□ -2.05
SSRP1Q08945 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SSRP1Q08945 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
SSRP1Q08945 SNORA1-201ENST00000384107 130 ntBASIC2.22□□□□□ -2.05
SSRP1Q08945 MIR513C-201ENST00000401352 84 ntBASIC2.22□□□□□ -2.05
SSRP1Q08945 RNU6-588P-201ENST00000410281 105 ntBASIC2.22□□□□□ -2.05
SSRP1Q08945 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.22□□□□□ -2.05
SSRP1Q08945 AC108210.2-201ENST00000503681 201 ntBASIC2.22□□□□□ -2.05
SSRP1Q08945 MIR3129-201ENST00000581095 76 ntBASIC2.22□□□□□ -2.05
SSRP1Q08945 MIR8074-201ENST00000615081 81 ntBASIC2.22□□□□□ -2.05
SSRP1Q08945 AC134878.1-201ENST00000619901 243 ntBASIC2.22□□□□□ -2.05
SSRP1Q08945 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
SSRP1Q08945 SNORD115-28-201ENST00000363931 81 ntBASIC2.21□□□□□ -2.06
SSRP1Q08945 Y_RNA.343-201ENST00000365354 112 ntBASIC2.21□□□□□ -2.06
SSRP1Q08945 RNU6-1292P-201ENST00000383856 107 ntBASIC2.21□□□□□ -2.06
SSRP1Q08945 RNU6-1336P-201ENST00000383886 109 ntBASIC2.21□□□□□ -2.06
SSRP1Q08945 RNU6-187P-201ENST00000384139 106 ntBASIC2.21□□□□□ -2.06
SSRP1Q08945 MIR136-201ENST00000385207 82 ntBASIC2.21□□□□□ -2.06
SSRP1Q08945 MIR624-201ENST00000385217 97 ntBASIC2.21□□□□□ -2.06
SSRP1Q08945 RNA5SP127-201ENST00000411051 133 ntBASIC2.21□□□□□ -2.06
SSRP1Q08945 RPS27P21-201ENST00000486977 252 ntBASIC2.21□□□□□ -2.06
SSRP1Q08945 SNORA18.4-201ENST00000516440 124 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms