Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 RNU6-816P-201ENST00000390914 107 ntBASIC2.77□□□□□ -1.97
SOX4Q06945 RNU6-1268P-201ENST00000391214 107 ntBASIC2.77□□□□□ -1.97
SOX4Q06945 RNU6-1239P-201ENST00000391310 107 ntBASIC2.77□□□□□ -1.97
SOX4Q06945 AL513328.1-201ENST00000446460 224 ntBASIC2.77□□□□□ -1.97
SOX4Q06945 RNU6-1116P-201ENST00000517269 99 ntBASIC2.77□□□□□ -1.97
SOX4Q06945 SNORD115-40-201ENST00000606510 82 ntBASIC2.77□□□□□ -1.97
SOX4Q06945 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
SOX4Q06945 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.76□□□□□ -1.97
SOX4Q06945 AL161431.1-201ENST00000618966 4205 ntBASIC2.76□□□□□ -1.97
SOX4Q06945 Y_RNA.93-201ENST00000363066 109 ntBASIC2.76□□□□□ -1.97
SOX4Q06945 RNU6-163P-201ENST00000384396 106 ntBASIC2.76□□□□□ -1.97
SOX4Q06945 MIR627-201ENST00000384979 97 ntBASIC2.76□□□□□ -1.97
SOX4Q06945 MIR1912-201ENST00000410389 80 ntBASIC2.76□□□□□ -1.97
SOX4Q06945 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.76□□□□□ -1.97
SOX4Q06945 STAG3L5P-204ENST00000443759 179 ntBASIC2.76□□□□□ -1.97
SOX4Q06945 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.76□□□□□ -1.97
SOX4Q06945 MALAT1.1-201ENST00000618249 95 ntBASIC2.76□□□□□ -1.97
SOX4Q06945 U4atac.1-201ENST00000618345 95 ntBASIC2.76□□□□□ -1.97
SOX4Q06945 MIR8054-201ENST00000620877 86 ntBASIC2.76□□□□□ -1.97
SOX4Q06945 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SOX4Q06945 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SOX4Q06945 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
SOX4Q06945 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
SOX4Q06945 SNORA27-201ENST00000384323 126 ntBASIC2.75□□□□□ -1.97
SOX4Q06945 SNORA11.4-201ENST00000408823 129 ntBASIC2.75□□□□□ -1.97
SOX4Q06945 RN7SKP200-201ENST00000410564 320 ntBASIC2.75□□□□□ -1.97
SOX4Q06945 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.75□□□□□ -1.97
SOX4Q06945 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.75□□□□□ -1.97
SOX4Q06945 DEFB131E-201ENST00000532329 154 ntBASIC2.75□□□□□ -1.97
SOX4Q06945 MIR4298-201ENST00000584380 73 ntBASIC2.75□□□□□ -1.97
SOX4Q06945 MIR6733-201ENST00000635723 61 ntBASIC2.75□□□□□ -1.97
SOX4Q06945 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.75□□□□□ -1.97
SOX4Q06945 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
SOX4Q06945 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
SOX4Q06945 Y_RNA.107-201ENST00000363190 121 ntBASIC2.74□□□□□ -1.97
SOX4Q06945 Y_RNA.241-201ENST00000364470 117 ntBASIC2.74□□□□□ -1.97
SOX4Q06945 MIR27B-201ENST00000385129 97 ntBASIC2.74□□□□□ -1.97
SOX4Q06945 RNA5SP210-201ENST00000391034 120 ntBASIC2.74□□□□□ -1.97
SOX4Q06945 RNA5SP492-201ENST00000411330 114 ntBASIC2.74□□□□□ -1.97
SOX4Q06945 AL035398.1-201ENST00000430869 322 ntBASIC2.74□□□□□ -1.97
SOX4Q06945 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.74□□□□□ -1.97
SOX4Q06945 AC107297.1-201ENST00000459991 176 ntBASIC2.74□□□□□ -1.97
SOX4Q06945 AC022513.1-201ENST00000624512 117 ntBASIC2.74□□□□□ -1.97
SOX4Q06945 AC108206.1-201ENST00000570186 4159 ntBASIC2.74□□□□□ -1.97
SOX4Q06945 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.74□□□□□ -1.97
SOX4Q06945 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SOX4Q06945 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SOX4Q06945 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
SOX4Q06945 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
SOX4Q06945 MIRLET7C-201ENST00000362160 84 ntBASIC2.73□□□□□ -1.97
SOX4Q06945 RNU4-36P-201ENST00000364294 144 ntBASIC2.73□□□□□ -1.97
SOX4Q06945 RNA5SP173-201ENST00000364857 136 ntBASIC2.73□□□□□ -1.97
SOX4Q06945 RNU6-301P-201ENST00000384277 107 ntBASIC2.73□□□□□ -1.97
SOX4Q06945 RNA5SP144-201ENST00000410846 116 ntBASIC2.73□□□□□ -1.97
SOX4Q06945 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.73□□□□□ -1.97
SOX4Q06945 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.73□□□□□ -1.97
SOX4Q06945 SNORA28-201ENST00000606769 126 ntBASIC2.73□□□□□ -1.97
SOX4Q06945 AC087741.2-201ENST00000619415 172 ntBASIC2.73□□□□□ -1.97
SOX4Q06945 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SOX4Q06945 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
SOX4Q06945 RNA5SP289-201ENST00000362332 137 ntBASIC2.72□□□□□ -1.97
SOX4Q06945 RNY3P2-201ENST00000362918 102 ntBASIC2.72□□□□□ -1.97
SOX4Q06945 SNORD115-3-201ENST00000363100 82 ntBASIC2.72□□□□□ -1.97
SOX4Q06945 SNORA25.6-201ENST00000364121 118 ntBASIC2.72□□□□□ -1.97
SOX4Q06945 Y_RNA.342-201ENST00000365352 113 ntBASIC2.72□□□□□ -1.97
SOX4Q06945 Y_RNA.494-201ENST00000384432 111 ntBASIC2.72□□□□□ -1.97
SOX4Q06945 AL512326.2-201ENST00000426359 151 ntBASIC2.72□□□□□ -1.97
SOX4Q06945 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.72□□□□□ -1.97
SOX4Q06945 AL445687.1-201ENST00000439946 251 ntBASIC2.72□□□□□ -1.97
SOX4Q06945 RNU6-998P-201ENST00000515894 101 ntBASIC2.72□□□□□ -1.97
SOX4Q06945 SNORA31.4-201ENST00000516049 129 ntBASIC2.72□□□□□ -1.97
SOX4Q06945 SCARNA23-201ENST00000516060 130 ntBASIC2.72□□□□□ -1.97
SOX4Q06945 AC027279.3-201ENST00000625055 122 ntBASIC2.72□□□□□ -1.97
SOX4Q06945 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.72□□□□□ -1.97
SOX4Q06945 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
SOX4Q06945 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.72□□□□□ -1.97
SOX4Q06945 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.71□□□□□ -1.98
SOX4Q06945 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
SOX4Q06945 MIR450A2-201ENST00000385022 100 ntBASIC2.71□□□□□ -1.98
SOX4Q06945 AL022718.1-201ENST00000412004 84 ntBASIC2.71□□□□□ -1.98
SOX4Q06945 AC015922.2-201ENST00000435593 184 ntBASIC2.71□□□□□ -1.98
SOX4Q06945 PGBD4P5-201ENST00000445958 426 ntBASIC2.71□□□□□ -1.98
SOX4Q06945 RNU7-96P-201ENST00000459535 64 ntBASIC2.71□□□□□ -1.98
SOX4Q06945 RN7SL429P-201ENST00000479090 223 ntBASIC2.71□□□□□ -1.98
SOX4Q06945 RN7SL489P-201ENST00000486185 223 ntBASIC2.71□□□□□ -1.98
SOX4Q06945 RN7SL327P-201ENST00000488659 223 ntBASIC2.71□□□□□ -1.98
SOX4Q06945 AC113410.1-201ENST00000505029 247 ntBASIC2.71□□□□□ -1.98
SOX4Q06945 RN7SKP12-201ENST00000516275 143 ntBASIC2.71□□□□□ -1.98
SOX4Q06945 SNORA31.10-201ENST00000516482 106 ntBASIC2.71□□□□□ -1.98
SOX4Q06945 RPPH1-2P-201ENST00000516688 293 ntBASIC2.71□□□□□ -1.98
SOX4Q06945 AC004812.1-201ENST00000540773 146 ntBASIC2.71□□□□□ -1.98
SOX4Q06945 AC026271.5-201ENST00000577873 130 ntBASIC2.71□□□□□ -1.98
SOX4Q06945 RN7SL853P-201ENST00000617250 223 ntBASIC2.71□□□□□ -1.98
SOX4Q06945 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.71□□□□□ -1.98
SOX4Q06945 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.71□□□□□ -1.98
SOX4Q06945 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.7□□□□□ -1.98
SOX4Q06945 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.7□□□□□ -1.98
SOX4Q06945 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.7□□□□□ -1.98
SOX4Q06945 SNORD115-34-201ENST00000362441 82 ntBASIC2.7□□□□□ -1.98
SOX4Q06945 SNORD115-12-201ENST00000362583 82 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 180.3 ms