Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.77□□□□□ -2.13
LTBQ06643 RPS27P21-201ENST00000486977 252 ntBASIC1.77□□□□□ -2.13
LTBQ06643 MRPS17P9-201ENST00000511924 393 ntBASIC1.77□□□□□ -2.13
LTBQ06643 RNA5SP153-201ENST00000516498 76 ntBASIC1.77□□□□□ -2.13
LTBQ06643 AL358944.1-201ENST00000528537 144 ntBASIC1.77□□□□□ -2.13
LTBQ06643 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.77□□□□□ -2.13
LTBQ06643 AC097639.2-201ENST00000603159 172 ntBASIC1.77□□□□□ -2.13
LTBQ06643 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.77□□□□□ -2.13
LTBQ06643 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
LTBQ06643 MIR126-201ENST00000362291 85 ntBASIC1.76□□□□□ -2.13
LTBQ06643 RNU6-22P-201ENST00000384355 107 ntBASIC1.76□□□□□ -2.13
LTBQ06643 RNU6-1117P-201ENST00000384525 104 ntBASIC1.76□□□□□ -2.13
LTBQ06643 MIR17-201ENST00000385012 84 ntBASIC1.76□□□□□ -2.13
LTBQ06643 MIR522-201ENST00000385071 87 ntBASIC1.76□□□□□ -2.13
LTBQ06643 RNU11-3P-201ENST00000391111 133 ntBASIC1.76□□□□□ -2.13
LTBQ06643 RNU11-5P-201ENST00000391216 129 ntBASIC1.76□□□□□ -2.13
LTBQ06643 SNORA75.5-201ENST00000391291 81 ntBASIC1.76□□□□□ -2.13
LTBQ06643 MLLT10P1-201ENST00000418346 262 ntBASIC1.76□□□□□ -2.13
LTBQ06643 RPL23AP63-201ENST00000498752 471 ntBASIC1.76□□□□□ -2.13
LTBQ06643 RNU6-971P-201ENST00000516920 106 ntBASIC1.76□□□□□ -2.13
LTBQ06643 AP002004.2-201ENST00000531656 154 ntBASIC1.76□□□□□ -2.13
LTBQ06643 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.76□□□□□ -2.13
LTBQ06643 SNORA4-201ENST00000584302 138 ntBASIC1.76□□□□□ -2.13
LTBQ06643 AC005786.1-201ENST00000588553 154 ntBASIC1.76□□□□□ -2.13
LTBQ06643 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.76□□□□□ -2.13
LTBQ06643 AL365222.1-201ENST00000614661 98 ntBASIC1.76□□□□□ -2.13
LTBQ06643 uc_338.20-201ENST00000621563 178 ntBASIC1.76□□□□□ -2.13
LTBQ06643 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
LTBQ06643 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
LTBQ06643 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
LTBQ06643 Y_RNA.66-201ENST00000362862 102 ntBASIC1.75□□□□□ -2.13
LTBQ06643 MIR518A2-201ENST00000384966 87 ntBASIC1.75□□□□□ -2.13
LTBQ06643 SUMO2P12-201ENST00000405924 140 ntBASIC1.75□□□□□ -2.13
LTBQ06643 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.75□□□□□ -2.13
LTBQ06643 AC245047.4-201ENST00000433189 144 ntBASIC1.75□□□□□ -2.13
LTBQ06643 RNU7-94P-201ENST00000459576 63 ntBASIC1.75□□□□□ -2.13
LTBQ06643 RN7SL274P-201ENST00000492268 272 ntBASIC1.75□□□□□ -2.13
LTBQ06643 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.75□□□□□ -2.13
LTBQ06643 RNA5SP182-201ENST00000516064 82 ntBASIC1.75□□□□□ -2.13
LTBQ06643 AC084364.2-201ENST00000546924 395 ntBASIC1.75□□□□□ -2.13
LTBQ06643 AC008507.4-201ENST00000585464 127 ntBASIC1.75□□□□□ -2.13
LTBQ06643 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.75□□□□□ -2.13
LTBQ06643 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
LTBQ06643 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
LTBQ06643 FTH1P12-201ENST00000432137 551 ntBASIC1.74□□□□□ -2.13
LTBQ06643 RNVU1-2-201ENST00000516326 135 ntBASIC1.74□□□□□ -2.13
LTBQ06643 RNU2-56P-201ENST00000516826 190 ntBASIC1.74□□□□□ -2.13
LTBQ06643 RNA5SP480-201ENST00000516840 109 ntBASIC1.74□□□□□ -2.13
LTBQ06643 AC007751.1-201ENST00000529260 376 ntBASIC1.74□□□□□ -2.13
LTBQ06643 MIR5094-201ENST00000578766 85 ntBASIC1.74□□□□□ -2.13
LTBQ06643 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
LTBQ06643 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.74□□□□□ -2.13
LTBQ06643 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.74□□□□□ -2.13
LTBQ06643 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.74□□□□□ -2.13
LTBQ06643 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
LTBQ06643 SNORD68-201ENST00000363214 84 ntBASIC1.73□□□□□ -2.13
LTBQ06643 SNORA25.7-201ENST00000364375 127 ntBASIC1.73□□□□□ -2.13
LTBQ06643 SNORD50B-201ENST00000364995 70 ntBASIC1.73□□□□□ -2.13
LTBQ06643 RNA5SP190-201ENST00000365222 118 ntBASIC1.73□□□□□ -2.13
LTBQ06643 SNORD61-201ENST00000384252 73 ntBASIC1.73□□□□□ -2.13
LTBQ06643 RNA5SP450-201ENST00000411206 102 ntBASIC1.73□□□□□ -2.13
LTBQ06643 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
LTBQ06643 AP1B1P2-201ENST00000416196 106 ntBASIC1.73□□□□□ -2.13
LTBQ06643 AL445685.2-201ENST00000422551 342 ntBASIC1.73□□□□□ -2.13
LTBQ06643 AC245047.3-201ENST00000429428 127 ntBASIC1.73□□□□□ -2.13
LTBQ06643 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.73□□□□□ -2.13
LTBQ06643 RNA5SP233-201ENST00000459153 113 ntBASIC1.73□□□□□ -2.13
LTBQ06643 RNU6-1211P-201ENST00000459179 105 ntBASIC1.73□□□□□ -2.13
LTBQ06643 Y_RNA.666-201ENST00000516187 112 ntBASIC1.73□□□□□ -2.13
LTBQ06643 SNORA31.10-201ENST00000516482 106 ntBASIC1.73□□□□□ -2.13
LTBQ06643 RNU6-365P-201ENST00000517113 106 ntBASIC1.73□□□□□ -2.13
LTBQ06643 MIR4662B-201ENST00000579498 81 ntBASIC1.73□□□□□ -2.13
LTBQ06643 AP001340.1-201ENST00000624405 217 ntBASIC1.73□□□□□ -2.13
LTBQ06643 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.73□□□□□ -2.13
LTBQ06643 Y_RNA.218-201ENST00000364218 104 ntBASIC1.72□□□□□ -2.13
LTBQ06643 SNORA1-201ENST00000384107 130 ntBASIC1.72□□□□□ -2.13
LTBQ06643 SNORA22C-201ENST00000384614 134 ntBASIC1.72□□□□□ -2.13
LTBQ06643 RNU6-440P-201ENST00000390882 105 ntBASIC1.72□□□□□ -2.13
LTBQ06643 RNA5SP465-201ENST00000391195 109 ntBASIC1.72□□□□□ -2.13
LTBQ06643 RNA5SP489-201ENST00000410986 109 ntBASIC1.72□□□□□ -2.13
LTBQ06643 SNORD13-201ENST00000459299 104 ntBASIC1.72□□□□□ -2.13
LTBQ06643 Y_RNA.686-201ENST00000516548 134 ntBASIC1.72□□□□□ -2.13
LTBQ06643 RNU6-1234P-201ENST00000516877 103 ntBASIC1.72□□□□□ -2.13
LTBQ06643 AC090142.3-201ENST00000519012 385 ntBASIC1.72□□□□□ -2.13
LTBQ06643 BX248123.2-201ENST00000606318 124 ntBASIC1.72□□□□□ -2.13
LTBQ06643 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.72□□□□□ -2.13
LTBQ06643 MIR8054-201ENST00000620877 86 ntBASIC1.72□□□□□ -2.13
LTBQ06643 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.72□□□□□ -2.13
LTBQ06643 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
LTBQ06643 RNU6-661P-201ENST00000362409 107 ntBASIC1.71□□□□□ -2.14
LTBQ06643 Y_RNA.71-201ENST00000362892 104 ntBASIC1.71□□□□□ -2.14
LTBQ06643 RNU6-1019P-201ENST00000364424 107 ntBASIC1.71□□□□□ -2.14
LTBQ06643 Y_RNA.261-201ENST00000364631 102 ntBASIC1.71□□□□□ -2.14
LTBQ06643 RNU6-915P-201ENST00000364943 103 ntBASIC1.71□□□□□ -2.14
LTBQ06643 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
LTBQ06643 RNU6-1168P-201ENST00000390831 104 ntBASIC1.71□□□□□ -2.14
LTBQ06643 Y_RNA.584-201ENST00000391090 114 ntBASIC1.71□□□□□ -2.14
LTBQ06643 SNORA26-201ENST00000391286 122 ntBASIC1.71□□□□□ -2.14
LTBQ06643 RNU4-62P-201ENST00000410125 130 ntBASIC1.71□□□□□ -2.14
LTBQ06643 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 205.9 ms