Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.18□□□□□ -2.22
CX3CL1P78423 RPL39P39-201ENST00000455840 151 ntBASIC1.18□□□□□ -2.22
CX3CL1P78423 RN7SKP164-201ENST00000516138 266 ntBASIC1.18□□□□□ -2.22
CX3CL1P78423 SNORA31.24-201ENST00000517232 57 ntBASIC1.18□□□□□ -2.22
CX3CL1P78423 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.18□□□□□ -2.22
CX3CL1P78423 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CX3CL1P78423 Y_RNA.262-201ENST00000364641 102 ntBASIC1.17□□□□□ -2.22
CX3CL1P78423 Y_RNA.269-201ENST00000364685 89 ntBASIC1.17□□□□□ -2.22
CX3CL1P78423 RNU4-17P-201ENST00000365598 141 ntBASIC1.17□□□□□ -2.22
CX3CL1P78423 Y_RNA.447-201ENST00000384184 113 ntBASIC1.17□□□□□ -2.22
CX3CL1P78423 Y_RNA.478-201ENST00000384358 107 ntBASIC1.17□□□□□ -2.22
CX3CL1P78423 RNU6-381P-201ENST00000391259 108 ntBASIC1.17□□□□□ -2.22
CX3CL1P78423 SNORD58.1-201ENST00000391313 66 ntBASIC1.17□□□□□ -2.22
CX3CL1P78423 AL354695.1-201ENST00000427935 228 ntBASIC1.17□□□□□ -2.22
CX3CL1P78423 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.17□□□□□ -2.22
CX3CL1P78423 RNU6-830P-201ENST00000516353 107 ntBASIC1.17□□□□□ -2.22
CX3CL1P78423 MIR4662B-201ENST00000579498 81 ntBASIC1.17□□□□□ -2.22
CX3CL1P78423 MIR3192-201ENST00000584920 77 ntBASIC1.17□□□□□ -2.22
CX3CL1P78423 AL645939.4-201ENST00000604495 135 ntBASIC1.17□□□□□ -2.22
CX3CL1P78423 AL161722.3-201ENST00000605789 2983 ntBASIC1.17□□□□□ -2.22
CX3CL1P78423 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
CX3CL1P78423 MIR6715A-201ENST00000615929 79 ntBASIC1.17□□□□□ -2.22
CX3CL1P78423 Pinc.1-201ENST00000616452 154 ntBASIC1.17□□□□□ -2.22
CX3CL1P78423 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CX3CL1P78423 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
CX3CL1P78423 RNA5SP327-201ENST00000362494 101 ntBASIC1.16□□□□□ -2.22
CX3CL1P78423 Y_RNA.65-201ENST00000362846 100 ntBASIC1.16□□□□□ -2.22
CX3CL1P78423 Y_RNA.486-201ENST00000384398 107 ntBASIC1.16□□□□□ -2.22
CX3CL1P78423 MIR616-201ENST00000385293 97 ntBASIC1.16□□□□□ -2.22
CX3CL1P78423 MT-TT-201ENST00000387460 66 ntBASIC1.16□□□□□ -2.22
CX3CL1P78423 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.16□□□□□ -2.22
CX3CL1P78423 AC048334.1-201ENST00000477975 159 ntBASIC1.16□□□□□ -2.22
CX3CL1P78423 SCARNA8-201ENST00000515924 131 ntBASIC1.16□□□□□ -2.22
CX3CL1P78423 SNORA31.2-201ENST00000516019 134 ntBASIC1.16□□□□□ -2.22
CX3CL1P78423 RNU6-1023P-201ENST00000516137 106 ntBASIC1.16□□□□□ -2.22
CX3CL1P78423 RNU7-43P-201ENST00000516554 64 ntBASIC1.16□□□□□ -2.22
CX3CL1P78423 RNU6-453P-201ENST00000516819 85 ntBASIC1.16□□□□□ -2.22
CX3CL1P78423 AC004817.2-201ENST00000561794 651 ntBASIC1.16□□□□□ -2.22
CX3CL1P78423 MIR4764-201ENST00000580680 88 ntBASIC1.16□□□□□ -2.22
CX3CL1P78423 AC104984.5-201ENST00000586878 94 ntBASIC1.16□□□□□ -2.22
CX3CL1P78423 AL391903.3-201ENST00000612158 163 ntBASIC1.16□□□□□ -2.22
CX3CL1P78423 AL353997.5-201ENST00000618886 171 ntBASIC1.16□□□□□ -2.22
CX3CL1P78423 RNY4P28-201ENST00000365281 93 ntBASIC1.15□□□□□ -2.23
CX3CL1P78423 MIR520C-201ENST00000385005 87 ntBASIC1.15□□□□□ -2.23
CX3CL1P78423 SNORD28B-201ENST00000390993 75 ntBASIC1.15□□□□□ -2.23
CX3CL1P78423 MIR548O-201ENST00000408583 114 ntBASIC1.15□□□□□ -2.23
CX3CL1P78423 RPS29P23-201ENST00000458635 123 ntBASIC1.15□□□□□ -2.23
CX3CL1P78423 snoU13.25-201ENST00000458945 104 ntBASIC1.15□□□□□ -2.23
CX3CL1P78423 RNU7-41P-201ENST00000515917 61 ntBASIC1.15□□□□□ -2.23
CX3CL1P78423 Y_RNA.666-201ENST00000516187 112 ntBASIC1.15□□□□□ -2.23
CX3CL1P78423 RNU7-25P-201ENST00000516544 62 ntBASIC1.15□□□□□ -2.23
CX3CL1P78423 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.15□□□□□ -2.23
CX3CL1P78423 AL160236.1-201ENST00000556317 195 ntBASIC1.15□□□□□ -2.23
CX3CL1P78423 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.15□□□□□ -2.23
CX3CL1P78423 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.15□□□□□ -2.23
CX3CL1P78423 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
CX3CL1P78423 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
CX3CL1P78423 RNY3P5-201ENST00000384127 102 ntBASIC1.14□□□□□ -2.23
CX3CL1P78423 RNU6-1054P-201ENST00000411293 104 ntBASIC1.14□□□□□ -2.23
CX3CL1P78423 AC245047.7-201ENST00000440265 293 ntBASIC1.14□□□□□ -2.23
CX3CL1P78423 COX6CP14-201ENST00000469580 174 ntBASIC1.14□□□□□ -2.23
CX3CL1P78423 RNU4-57P-201ENST00000515980 135 ntBASIC1.14□□□□□ -2.23
CX3CL1P78423 MIR4303-201ENST00000581299 66 ntBASIC1.14□□□□□ -2.23
CX3CL1P78423 MIR4524B-201ENST00000581569 115 ntBASIC1.14□□□□□ -2.23
CX3CL1P78423 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.14□□□□□ -2.23
CX3CL1P78423 MIR26B-201ENST00000362251 77 ntBASIC1.13□□□□□ -2.23
CX3CL1P78423 SNORA20.1-201ENST00000364790 130 ntBASIC1.13□□□□□ -2.23
CX3CL1P78423 RNU6-484P-201ENST00000384016 107 ntBASIC1.13□□□□□ -2.23
CX3CL1P78423 Y_RNA.547-201ENST00000384654 119 ntBASIC1.13□□□□□ -2.23
CX3CL1P78423 U8.17-201ENST00000391292 132 ntBASIC1.13□□□□□ -2.23
CX3CL1P78423 AL606845.1-201ENST00000404881 255 ntBASIC1.13□□□□□ -2.23
CX3CL1P78423 SNRPGP13-201ENST00000442212 177 ntBASIC1.13□□□□□ -2.23
CX3CL1P78423 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.13□□□□□ -2.23
CX3CL1P78423 RNY3P16-201ENST00000516338 101 ntBASIC1.13□□□□□ -2.23
CX3CL1P78423 RNU6-111P-201ENST00000517179 105 ntBASIC1.13□□□□□ -2.23
CX3CL1P78423 RNU7-181P-201ENST00000517234 74 ntBASIC1.13□□□□□ -2.23
CX3CL1P78423 MIR548AR-201ENST00000582191 57 ntBASIC1.13□□□□□ -2.23
CX3CL1P78423 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.13□□□□□ -2.23
CX3CL1P78423 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.12□□□□□ -2.23
CX3CL1P78423 U8.1-201ENST00000362843 134 ntBASIC1.12□□□□□ -2.23
CX3CL1P78423 RNA5SP99-201ENST00000364020 114 ntBASIC1.12□□□□□ -2.23
CX3CL1P78423 Y_RNA.622-201ENST00000411091 108 ntBASIC1.12□□□□□ -2.23
CX3CL1P78423 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.12□□□□□ -2.23
CX3CL1P78423 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.12□□□□□ -2.23
CX3CL1P78423 SNORA31.4-201ENST00000516049 129 ntBASIC1.12□□□□□ -2.23
CX3CL1P78423 RNU4-71P-201ENST00000516258 113 ntBASIC1.12□□□□□ -2.23
CX3CL1P78423 RNA5SP61-201ENST00000516453 100 ntBASIC1.12□□□□□ -2.23
CX3CL1P78423 RNU6-126P-201ENST00000516685 103 ntBASIC1.12□□□□□ -2.23
CX3CL1P78423 AC007751.1-201ENST00000529260 376 ntBASIC1.12□□□□□ -2.23
CX3CL1P78423 AC019288.1-201ENST00000557918 224 ntBASIC1.12□□□□□ -2.23
CX3CL1P78423 AC008133.2-201ENST00000624540 351 ntBASIC1.12□□□□□ -2.23
CX3CL1P78423 Y_RNA.91-201ENST00000363042 107 ntBASIC1.11□□□□□ -2.23
CX3CL1P78423 RNA5SP48-201ENST00000363969 126 ntBASIC1.11□□□□□ -2.23
CX3CL1P78423 Y_RNA.308-201ENST00000365043 101 ntBASIC1.11□□□□□ -2.23
CX3CL1P78423 Y_RNA.432-201ENST00000384087 111 ntBASIC1.11□□□□□ -2.23
CX3CL1P78423 MIR548A2-201ENST00000384956 97 ntBASIC1.11□□□□□ -2.23
CX3CL1P78423 RNU6-910P-201ENST00000390844 107 ntBASIC1.11□□□□□ -2.23
CX3CL1P78423 RNU6-1228P-201ENST00000391014 107 ntBASIC1.11□□□□□ -2.23
CX3CL1P78423 SNORA17.3-201ENST00000391159 129 ntBASIC1.11□□□□□ -2.23
CX3CL1P78423 RNU6-493P-201ENST00000391321 108 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 294.8 ms