Protein–RNA interactions for Protein: P78367

NKX3-2, Homeobox protein Nkx-3.2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2P78367 RNU6-589P-201ENST00000516485 107 ntBASIC2.45□□□□□ -2.02
NKX3-2P78367 RNU6-1149P-201ENST00000516810 97 ntBASIC2.45□□□□□ -2.02
NKX3-2P78367 Y_RNA.714-201ENST00000517065 90 ntBASIC2.45□□□□□ -2.02
NKX3-2P78367 RNA5SP402-201ENST00000517148 110 ntBASIC2.45□□□□□ -2.02
NKX3-2P78367 MIR5694-201ENST00000581190 76 ntBASIC2.45□□□□□ -2.02
NKX3-2P78367 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
NKX3-2P78367 RNU1-52P-201ENST00000384190 164 ntBASIC2.44□□□□□ -2.02
NKX3-2P78367 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.44□□□□□ -2.02
NKX3-2P78367 BX510359.4-201ENST00000423750 193 ntBASIC2.44□□□□□ -2.02
NKX3-2P78367 AC245047.3-201ENST00000429428 127 ntBASIC2.44□□□□□ -2.02
NKX3-2P78367 AL021397.1-201ENST00000451806 248 ntBASIC2.44□□□□□ -2.02
NKX3-2P78367 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.44□□□□□ -2.02
NKX3-2P78367 RN7SKP19-201ENST00000516016 252 ntBASIC2.44□□□□□ -2.02
NKX3-2P78367 SCARNA15-202ENST00000516881 127 ntBASIC2.44□□□□□ -2.02
NKX3-2P78367 RNU6-548P-201ENST00000517083 115 ntBASIC2.44□□□□□ -2.02
NKX3-2P78367 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.44□□□□□ -2.02
NKX3-2P78367 AC026271.5-201ENST00000577873 130 ntBASIC2.44□□□□□ -2.02
NKX3-2P78367 MIR4762-201ENST00000585261 75 ntBASIC2.44□□□□□ -2.02
NKX3-2P78367 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
NKX3-2P78367 SNORA6-201ENST00000384033 151 ntBASIC2.43□□□□□ -2.02
NKX3-2P78367 MIRLET7F2-201ENST00000385277 83 ntBASIC2.43□□□□□ -2.02
NKX3-2P78367 MIR548O-201ENST00000408583 114 ntBASIC2.43□□□□□ -2.02
NKX3-2P78367 SNORA11.4-201ENST00000408823 129 ntBASIC2.43□□□□□ -2.02
NKX3-2P78367 MTATP6P21-201ENST00000440681 189 ntBASIC2.43□□□□□ -2.02
NKX3-2P78367 AC121758.2-201ENST00000553271 193 ntBASIC2.43□□□□□ -2.02
NKX3-2P78367 AL670379.3-201ENST00000605040 251 ntBASIC2.43□□□□□ -2.02
NKX3-2P78367 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.43□□□□□ -2.02
NKX3-2P78367 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
NKX3-2P78367 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
NKX3-2P78367 RNU1-58P-201ENST00000362413 163 ntBASIC2.42□□□□□ -2.02
NKX3-2P78367 RNU6-1084P-201ENST00000362498 107 ntBASIC2.42□□□□□ -2.02
NKX3-2P78367 RNA5SP99-201ENST00000364020 114 ntBASIC2.42□□□□□ -2.02
NKX3-2P78367 U8.5-201ENST00000364528 136 ntBASIC2.42□□□□□ -2.02
NKX3-2P78367 SNORA22-201ENST00000383907 134 ntBASIC2.42□□□□□ -2.02
NKX3-2P78367 RNU1-148P-201ENST00000384472 162 ntBASIC2.42□□□□□ -2.02
NKX3-2P78367 MIR802-201ENST00000390235 94 ntBASIC2.42□□□□□ -2.02
NKX3-2P78367 SNRPGP14-201ENST00000435400 219 ntBASIC2.42□□□□□ -2.02
NKX3-2P78367 SNORA31.11-201ENST00000516528 139 ntBASIC2.42□□□□□ -2.02
NKX3-2P78367 RNU7-25P-201ENST00000516544 62 ntBASIC2.42□□□□□ -2.02
NKX3-2P78367 IGLV3-17-201ENST00000519099 244 ntBASIC2.42□□□□□ -2.02
NKX3-2P78367 MIR6895-201ENST00000613497 78 ntBASIC2.42□□□□□ -2.02
NKX3-2P78367 AL353997.5-201ENST00000618886 171 ntBASIC2.42□□□□□ -2.02
NKX3-2P78367 MIR6132-201ENST00000622083 109 ntBASIC2.42□□□□□ -2.02
NKX3-2P78367 ICE2P2-201ENST00000483823 2787 ntBASIC2.41□□□□□ -2.02
NKX3-2P78367 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
NKX3-2P78367 Y_RNA.35-201ENST00000362601 101 ntBASIC2.41□□□□□ -2.02
NKX3-2P78367 SNORD14E-201ENST00000364009 85 ntBASIC2.41□□□□□ -2.02
NKX3-2P78367 RNU6-268P-201ENST00000364174 107 ntBASIC2.41□□□□□ -2.02
NKX3-2P78367 MIR548A3-201ENST00000385297 97 ntBASIC2.41□□□□□ -2.02
NKX3-2P78367 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.41□□□□□ -2.02
NKX3-2P78367 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.41□□□□□ -2.02
NKX3-2P78367 SNORD45.4-201ENST00000516629 73 ntBASIC2.41□□□□□ -2.02
NKX3-2P78367 AL137847.3-201ENST00000611521 109 ntBASIC2.41□□□□□ -2.02
NKX3-2P78367 AC025166.1-201ENST00000612411 163 ntBASIC2.41□□□□□ -2.02
NKX3-2P78367 AC006441.5-201ENST00000612680 209 ntBASIC2.41□□□□□ -2.02
NKX3-2P78367 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
NKX3-2P78367 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
NKX3-2P78367 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
NKX3-2P78367 Y_RNA.242-201ENST00000364473 110 ntBASIC2.4□□□□□ -2.03
NKX3-2P78367 Y_RNA.265-201ENST00000364677 108 ntBASIC2.4□□□□□ -2.03
NKX3-2P78367 RNU6-442P-201ENST00000383968 104 ntBASIC2.4□□□□□ -2.03
NKX3-2P78367 MIR597-201ENST00000384968 97 ntBASIC2.4□□□□□ -2.03
NKX3-2P78367 MIR1263-201ENST00000408324 86 ntBASIC2.4□□□□□ -2.03
NKX3-2P78367 RNU6-1116P-201ENST00000517269 99 ntBASIC2.4□□□□□ -2.03
NKX3-2P78367 AC084364.2-201ENST00000546924 395 ntBASIC2.4□□□□□ -2.03
NKX3-2P78367 MIR5197-201ENST00000583721 112 ntBASIC2.4□□□□□ -2.03
NKX3-2P78367 AL121890.5-201ENST00000620848 304 ntBASIC2.4□□□□□ -2.03
NKX3-2P78367 MIR8054-201ENST00000620877 86 ntBASIC2.4□□□□□ -2.03
NKX3-2P78367 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.39□□□□□ -2.03
NKX3-2P78367 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.39□□□□□ -2.03
NKX3-2P78367 snoU2-30.1-201ENST00000365012 70 ntBASIC2.39□□□□□ -2.03
NKX3-2P78367 SNORD116-21-201ENST00000384507 92 ntBASIC2.39□□□□□ -2.03
NKX3-2P78367 Y_RNA.547-201ENST00000384654 119 ntBASIC2.39□□□□□ -2.03
NKX3-2P78367 MIR548A1-201ENST00000385041 97 ntBASIC2.39□□□□□ -2.03
NKX3-2P78367 RNU6-440P-201ENST00000390882 105 ntBASIC2.39□□□□□ -2.03
NKX3-2P78367 RNA5SP482-201ENST00000391269 118 ntBASIC2.39□□□□□ -2.03
NKX3-2P78367 AC063976.4-201ENST00000421971 163 ntBASIC2.39□□□□□ -2.03
NKX3-2P78367 RNU6-295P-201ENST00000516901 104 ntBASIC2.39□□□□□ -2.03
NKX3-2P78367 MIR3126-201ENST00000577443 74 ntBASIC2.39□□□□□ -2.03
NKX3-2P78367 AC005786.1-201ENST00000588553 154 ntBASIC2.39□□□□□ -2.03
NKX3-2P78367 MTND5P18-201ENST00000445624 1801 ntBASIC2.39□□□□□ -2.03
NKX3-2P78367 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
NKX3-2P78367 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
NKX3-2P78367 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
NKX3-2P78367 SNORA80E-201ENST00000384744 137 ntBASIC2.38□□□□□ -2.03
NKX3-2P78367 STAG3L5P-204ENST00000443759 179 ntBASIC2.38□□□□□ -2.03
NKX3-2P78367 CYCTP-201ENST00000504253 315 ntBASIC2.38□□□□□ -2.03
NKX3-2P78367 SNORA31.10-201ENST00000516482 106 ntBASIC2.38□□□□□ -2.03
NKX3-2P78367 MIR5094-201ENST00000578766 85 ntBASIC2.38□□□□□ -2.03
NKX3-2P78367 AC245884.12-201ENST00000615364 59 ntBASIC2.38□□□□□ -2.03
NKX3-2P78367 AC134878.1-201ENST00000619901 243 ntBASIC2.38□□□□□ -2.03
NKX3-2P78367 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.38□□□□□ -2.03
NKX3-2P78367 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
NKX3-2P78367 RNU6-755P-201ENST00000364400 103 ntBASIC2.37□□□□□ -2.03
NKX3-2P78367 Y_RNA.346-201ENST00000365385 112 ntBASIC2.37□□□□□ -2.03
NKX3-2P78367 Y_RNA.366-201ENST00000365540 102 ntBASIC2.37□□□□□ -2.03
NKX3-2P78367 MIR29C-201ENST00000385231 88 ntBASIC2.37□□□□□ -2.03
NKX3-2P78367 CALM2P4-201ENST00000430810 426 ntBASIC2.37□□□□□ -2.03
NKX3-2P78367 Y_RNA.649-201ENST00000459077 103 ntBASIC2.37□□□□□ -2.03
NKX3-2P78367 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms