Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 Y_RNA.267-201ENST00000364679 109 ntBASIC1.45□□□□□ -2.18
LMO4P61968 Y_RNA.634-201ENST00000364811 113 ntBASIC1.45□□□□□ -2.18
LMO4P61968 RNA5SP138-201ENST00000365098 114 ntBASIC1.45□□□□□ -2.18
LMO4P61968 RNU6-1138P-201ENST00000365359 106 ntBASIC1.45□□□□□ -2.18
LMO4P61968 RNU6-735P-201ENST00000410612 107 ntBASIC1.45□□□□□ -2.18
LMO4P61968 RNU2-70P-201ENST00000410718 179 ntBASIC1.45□□□□□ -2.18
LMO4P61968 RNA5SP489-201ENST00000410986 109 ntBASIC1.45□□□□□ -2.18
LMO4P61968 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.45□□□□□ -2.18
LMO4P61968 CST2P1-201ENST00000425770 87 ntBASIC1.45□□□□□ -2.18
LMO4P61968 AC245047.4-201ENST00000433189 144 ntBASIC1.45□□□□□ -2.18
LMO4P61968 AC008267.6-201ENST00000441664 139 ntBASIC1.45□□□□□ -2.18
LMO4P61968 AC023449.1-201ENST00000454464 154 ntBASIC1.45□□□□□ -2.18
LMO4P61968 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.45□□□□□ -2.18
LMO4P61968 RNU6-1211P-201ENST00000459179 105 ntBASIC1.45□□□□□ -2.18
LMO4P61968 RPS26P45-201ENST00000471748 340 ntBASIC1.45□□□□□ -2.18
LMO4P61968 HMGN1P7-201ENST00000491722 313 ntBASIC1.45□□□□□ -2.18
LMO4P61968 OR9P1P-201ENST00000496431 281 ntBASIC1.45□□□□□ -2.18
LMO4P61968 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.45□□□□□ -2.18
LMO4P61968 RNVU1-2-201ENST00000516326 135 ntBASIC1.45□□□□□ -2.18
LMO4P61968 RNA5SP153-201ENST00000516498 76 ntBASIC1.45□□□□□ -2.18
LMO4P61968 RNU1-142P-201ENST00000516682 145 ntBASIC1.45□□□□□ -2.18
LMO4P61968 RNU6-1234P-201ENST00000516877 103 ntBASIC1.45□□□□□ -2.18
LMO4P61968 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.45□□□□□ -2.18
LMO4P61968 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
LMO4P61968 RNU6-862P-201ENST00000362804 105 ntBASIC1.44□□□□□ -2.18
LMO4P61968 RNU6-457P-201ENST00000363999 107 ntBASIC1.44□□□□□ -2.18
LMO4P61968 SNORD116-14-201ENST00000383894 92 ntBASIC1.44□□□□□ -2.18
LMO4P61968 SNORD116-17-201ENST00000383929 92 ntBASIC1.44□□□□□ -2.18
LMO4P61968 Y_RNA.486-201ENST00000384398 107 ntBASIC1.44□□□□□ -2.18
LMO4P61968 SNORD116-15-201ENST00000384445 92 ntBASIC1.44□□□□□ -2.18
LMO4P61968 SNORD116-19-201ENST00000384729 92 ntBASIC1.44□□□□□ -2.18
LMO4P61968 SNORA12.1-201ENST00000390873 148 ntBASIC1.44□□□□□ -2.18
LMO4P61968 RNA5SP323-201ENST00000391094 133 ntBASIC1.44□□□□□ -2.18
LMO4P61968 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.44□□□□□ -2.18
LMO4P61968 AC099677.2-201ENST00000436385 175 ntBASIC1.44□□□□□ -2.18
LMO4P61968 RNU6-341P-201ENST00000516973 96 ntBASIC1.44□□□□□ -2.18
LMO4P61968 AC090142.3-201ENST00000519012 385 ntBASIC1.44□□□□□ -2.18
LMO4P61968 AP001328.1-201ENST00000528550 176 ntBASIC1.44□□□□□ -2.18
LMO4P61968 MIR4419B-201ENST00000577260 68 ntBASIC1.44□□□□□ -2.18
LMO4P61968 MIR502-201ENST00000606349 86 ntBASIC1.44□□□□□ -2.18
LMO4P61968 Pinc.1-201ENST00000616452 154 ntBASIC1.44□□□□□ -2.18
LMO4P61968 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.44□□□□□ -2.18
LMO4P61968 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.44□□□□□ -2.18
LMO4P61968 AP001340.1-201ENST00000624405 217 ntBASIC1.44□□□□□ -2.18
LMO4P61968 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
LMO4P61968 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.43□□□□□ -2.18
LMO4P61968 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
LMO4P61968 SNORA1B-201ENST00000362535 133 ntBASIC1.43□□□□□ -2.18
LMO4P61968 Y_RNA.66-201ENST00000362862 102 ntBASIC1.43□□□□□ -2.18
LMO4P61968 Y_RNA.127-201ENST00000363386 109 ntBASIC1.43□□□□□ -2.18
LMO4P61968 SNORA25.7-201ENST00000364375 127 ntBASIC1.43□□□□□ -2.18
LMO4P61968 RNU6-915P-201ENST00000364943 103 ntBASIC1.43□□□□□ -2.18
LMO4P61968 MIR539-201ENST00000365690 78 ntBASIC1.43□□□□□ -2.18
LMO4P61968 SNORD72-201ENST00000390994 80 ntBASIC1.43□□□□□ -2.18
LMO4P61968 Y_RNA.584-201ENST00000391090 114 ntBASIC1.43□□□□□ -2.18
LMO4P61968 RNU11-5P-201ENST00000391216 129 ntBASIC1.43□□□□□ -2.18
LMO4P61968 SNRPGP10-201ENST00000432323 225 ntBASIC1.43□□□□□ -2.18
LMO4P61968 AL606517.2-201ENST00000442855 241 ntBASIC1.43□□□□□ -2.18
LMO4P61968 AL163195.1-201ENST00000496941 348 ntBASIC1.43□□□□□ -2.18
LMO4P61968 RNU6-1333P-201ENST00000516162 93 ntBASIC1.43□□□□□ -2.18
LMO4P61968 RNU2-56P-201ENST00000516826 190 ntBASIC1.43□□□□□ -2.18
LMO4P61968 AC007751.1-201ENST00000529260 376 ntBASIC1.43□□□□□ -2.18
LMO4P61968 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.43□□□□□ -2.18
LMO4P61968 AC022254.1-201ENST00000567857 235 ntBASIC1.43□□□□□ -2.18
LMO4P61968 MIR5094-201ENST00000578766 85 ntBASIC1.43□□□□□ -2.18
LMO4P61968 U7.2-201ENST00000607576 63 ntBASIC1.43□□□□□ -2.18
LMO4P61968 AC011603.4-201ENST00000611325 277 ntBASIC1.43□□□□□ -2.18
LMO4P61968 AL591926.4-201ENST00000616895 298 ntBASIC1.43□□□□□ -2.18
LMO4P61968 TUG1_4.1-201ENST00000619464 181 ntBASIC1.43□□□□□ -2.18
LMO4P61968 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
LMO4P61968 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
LMO4P61968 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.43□□□□□ -2.18
LMO4P61968 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
LMO4P61968 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
LMO4P61968 RNA5SP205-201ENST00000364653 136 ntBASIC1.42□□□□□ -2.18
LMO4P61968 MIR515-2-201ENST00000384883 83 ntBASIC1.42□□□□□ -2.18
LMO4P61968 MIR515-1-201ENST00000384884 83 ntBASIC1.42□□□□□ -2.18
LMO4P61968 SNORA67.5-201ENST00000391036 107 ntBASIC1.42□□□□□ -2.18
LMO4P61968 RNA5SP100-201ENST00000410903 110 ntBASIC1.42□□□□□ -2.18
LMO4P61968 RNA5SP59-201ENST00000410922 110 ntBASIC1.42□□□□□ -2.18
LMO4P61968 Y_RNA.686-201ENST00000516548 134 ntBASIC1.42□□□□□ -2.18
LMO4P61968 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.42□□□□□ -2.18
LMO4P61968 AC024995.1-201ENST00000523014 93 ntBASIC1.42□□□□□ -2.18
LMO4P61968 AL358944.1-201ENST00000528537 144 ntBASIC1.42□□□□□ -2.18
LMO4P61968 AP002004.2-201ENST00000531656 154 ntBASIC1.42□□□□□ -2.18
LMO4P61968 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.42□□□□□ -2.18
LMO4P61968 MIR4662B-201ENST00000579498 81 ntBASIC1.42□□□□□ -2.18
LMO4P61968 AC008507.4-201ENST00000585464 127 ntBASIC1.42□□□□□ -2.18
LMO4P61968 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.42□□□□□ -2.18
LMO4P61968 AC022217.4-201ENST00000604389 163 ntBASIC1.42□□□□□ -2.18
LMO4P61968 AC069114.2-201ENST00000604699 304 ntBASIC1.42□□□□□ -2.18
LMO4P61968 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.42□□□□□ -2.18
LMO4P61968 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.42□□□□□ -2.18
LMO4P61968 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.42□□□□□ -2.18
LMO4P61968 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
LMO4P61968 MIR126-201ENST00000362291 85 ntBASIC1.41□□□□□ -2.18
LMO4P61968 U8.1-201ENST00000362843 134 ntBASIC1.41□□□□□ -2.18
LMO4P61968 Y_RNA.294-201ENST00000364916 102 ntBASIC1.41□□□□□ -2.18
LMO4P61968 SNORA26-201ENST00000391286 122 ntBASIC1.41□□□□□ -2.18
LMO4P61968 RNU2-40P-201ENST00000410833 196 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms