Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 RNA5SP480-201ENST00000516840 109 ntBASIC1.59□□□□□ -2.15
HDAC4P56524 MIR4778-201ENST00000577635 80 ntBASIC1.59□□□□□ -2.15
HDAC4P56524 MIR5688-201ENST00000580619 83 ntBASIC1.59□□□□□ -2.15
HDAC4P56524 AC141273.2-201ENST00000618989 130 ntBASIC1.59□□□□□ -2.15
HDAC4P56524 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
HDAC4P56524 Y_RNA.540-201ENST00000384638 111 ntBASIC1.58□□□□□ -2.16
HDAC4P56524 MT-TT-201ENST00000387460 66 ntBASIC1.58□□□□□ -2.16
HDAC4P56524 RNU7-95P-201ENST00000459222 64 ntBASIC1.58□□□□□ -2.16
HDAC4P56524 CYCTP-201ENST00000504253 315 ntBASIC1.58□□□□□ -2.16
HDAC4P56524 SUMO2P16-201ENST00000519475 264 ntBASIC1.58□□□□□ -2.16
HDAC4P56524 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.58□□□□□ -2.16
HDAC4P56524 AC120024.3-201ENST00000603167 156 ntBASIC1.58□□□□□ -2.16
HDAC4P56524 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.57□□□□□ -2.16
HDAC4P56524 Y_RNA.262-201ENST00000364641 102 ntBASIC1.57□□□□□ -2.16
HDAC4P56524 Y_RNA.308-201ENST00000365043 101 ntBASIC1.57□□□□□ -2.16
HDAC4P56524 MIR320A-201ENST00000385302 82 ntBASIC1.57□□□□□ -2.16
HDAC4P56524 SNORD72-201ENST00000390994 80 ntBASIC1.57□□□□□ -2.16
HDAC4P56524 SNRPGP14-201ENST00000435400 219 ntBASIC1.57□□□□□ -2.16
HDAC4P56524 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.57□□□□□ -2.16
HDAC4P56524 SNORD45.4-201ENST00000516629 73 ntBASIC1.57□□□□□ -2.16
HDAC4P56524 Y_RNA.714-201ENST00000517065 90 ntBASIC1.57□□□□□ -2.16
HDAC4P56524 AC019176.1-201ENST00000518519 225 ntBASIC1.57□□□□□ -2.16
HDAC4P56524 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
HDAC4P56524 MIR3937-201ENST00000580135 106 ntBASIC1.57□□□□□ -2.16
HDAC4P56524 MIR4303-201ENST00000581299 66 ntBASIC1.57□□□□□ -2.16
HDAC4P56524 MIR2681-201ENST00000581814 105 ntBASIC1.57□□□□□ -2.16
HDAC4P56524 AC008507.4-201ENST00000585464 127 ntBASIC1.57□□□□□ -2.16
HDAC4P56524 AL049861.1-201ENST00000603130 150 ntBASIC1.57□□□□□ -2.16
HDAC4P56524 AL078603.1-201ENST00000603824 313 ntBASIC1.57□□□□□ -2.16
HDAC4P56524 AL645939.4-201ENST00000604495 135 ntBASIC1.57□□□□□ -2.16
HDAC4P56524 JPX_2.1-201ENST00000614161 69 ntBASIC1.57□□□□□ -2.16
HDAC4P56524 AC027279.3-201ENST00000625055 122 ntBASIC1.57□□□□□ -2.16
HDAC4P56524 AL442644.1-201ENST00000454390 3105 ntBASIC1.57□□□□□ -2.16
HDAC4P56524 MIR411-201ENST00000362239 96 ntBASIC1.56□□□□□ -2.16
HDAC4P56524 RNU6-833P-201ENST00000363486 107 ntBASIC1.56□□□□□ -2.16
HDAC4P56524 Y_RNA.199-201ENST00000364014 102 ntBASIC1.56□□□□□ -2.16
HDAC4P56524 Y_RNA.200-201ENST00000364018 102 ntBASIC1.56□□□□□ -2.16
HDAC4P56524 RNU6-923P-201ENST00000364753 107 ntBASIC1.56□□□□□ -2.16
HDAC4P56524 RNU6-60P-201ENST00000364792 103 ntBASIC1.56□□□□□ -2.16
HDAC4P56524 SNORD1A-201ENST00000364968 72 ntBASIC1.56□□□□□ -2.16
HDAC4P56524 RNA5SP259-201ENST00000365541 109 ntBASIC1.56□□□□□ -2.16
HDAC4P56524 MIR526A1-201ENST00000384897 85 ntBASIC1.56□□□□□ -2.16
HDAC4P56524 MIR517C-201ENST00000385103 95 ntBASIC1.56□□□□□ -2.16
HDAC4P56524 RNU6-131P-201ENST00000391144 107 ntBASIC1.56□□□□□ -2.16
HDAC4P56524 RNA5SP496-201ENST00000391240 109 ntBASIC1.56□□□□□ -2.16
HDAC4P56524 RNU6-493P-201ENST00000391321 108 ntBASIC1.56□□□□□ -2.16
HDAC4P56524 MIR1304-201ENST00000408243 91 ntBASIC1.56□□□□□ -2.16
HDAC4P56524 AC009474.2-201ENST00000451383 136 ntBASIC1.56□□□□□ -2.16
HDAC4P56524 AC023790.1-201ENST00000482174 347 ntBASIC1.56□□□□□ -2.16
HDAC4P56524 RNU7-12P-201ENST00000516030 62 ntBASIC1.56□□□□□ -2.16
HDAC4P56524 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.56□□□□□ -2.16
HDAC4P56524 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
HDAC4P56524 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
HDAC4P56524 Y_RNA.257-201ENST00000364596 102 ntBASIC1.55□□□□□ -2.16
HDAC4P56524 RNU4-17P-201ENST00000365598 141 ntBASIC1.55□□□□□ -2.16
HDAC4P56524 RNU6-47P-201ENST00000383866 107 ntBASIC1.55□□□□□ -2.16
HDAC4P56524 RNU6-163P-201ENST00000384396 106 ntBASIC1.55□□□□□ -2.16
HDAC4P56524 MIR150-201ENST00000385048 84 ntBASIC1.55□□□□□ -2.16
HDAC4P56524 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.55□□□□□ -2.16
HDAC4P56524 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.55□□□□□ -2.16
HDAC4P56524 RPS29P23-201ENST00000458635 123 ntBASIC1.55□□□□□ -2.16
HDAC4P56524 SNORD53B-201ENST00000577887 78 ntBASIC1.55□□□□□ -2.16
HDAC4P56524 MIR4452-201ENST00000583004 71 ntBASIC1.55□□□□□ -2.16
HDAC4P56524 uc_338.4-201ENST00000616635 176 ntBASIC1.55□□□□□ -2.16
HDAC4P56524 AL121890.5-201ENST00000620848 304 ntBASIC1.55□□□□□ -2.16
HDAC4P56524 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
HDAC4P56524 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
HDAC4P56524 RNU1-42P-201ENST00000364033 160 ntBASIC1.54□□□□□ -2.16
HDAC4P56524 RNU6-1065P-201ENST00000384513 106 ntBASIC1.54□□□□□ -2.16
HDAC4P56524 MIR616-201ENST00000385293 97 ntBASIC1.54□□□□□ -2.16
HDAC4P56524 RNU6-918P-201ENST00000391219 106 ntBASIC1.54□□□□□ -2.16
HDAC4P56524 MIR891A-201ENST00000401237 79 ntBASIC1.54□□□□□ -2.16
HDAC4P56524 RNU6-955P-201ENST00000410497 104 ntBASIC1.54□□□□□ -2.16
HDAC4P56524 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.54□□□□□ -2.16
HDAC4P56524 SNORD77.4-201ENST00000516158 81 ntBASIC1.54□□□□□ -2.16
HDAC4P56524 RNU6-561P-201ENST00000516222 102 ntBASIC1.54□□□□□ -2.16
HDAC4P56524 RNU6-917P-201ENST00000516294 104 ntBASIC1.54□□□□□ -2.16
HDAC4P56524 RNU6-902P-201ENST00000517212 91 ntBASIC1.54□□□□□ -2.16
HDAC4P56524 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.54□□□□□ -2.16
HDAC4P56524 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.54□□□□□ -2.16
HDAC4P56524 MIR6734-201ENST00000621166 68 ntBASIC1.54□□□□□ -2.16
HDAC4P56524 AC106754.2-201ENST00000623006 233 ntBASIC1.54□□□□□ -2.16
HDAC4P56524 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
HDAC4P56524 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
HDAC4P56524 RNU6-199P-201ENST00000362954 107 ntBASIC1.53□□□□□ -2.16
HDAC4P56524 Y_RNA.83-201ENST00000363005 113 ntBASIC1.53□□□□□ -2.16
HDAC4P56524 Y_RNA.552-201ENST00000384665 112 ntBASIC1.53□□□□□ -2.16
HDAC4P56524 SNORA67.6-201ENST00000391093 99 ntBASIC1.53□□□□□ -2.16
HDAC4P56524 Y_RNA.587-201ENST00000391210 103 ntBASIC1.53□□□□□ -2.16
HDAC4P56524 AL354695.1-201ENST00000427935 228 ntBASIC1.53□□□□□ -2.16
HDAC4P56524 AC027119.1-201ENST00000440877 241 ntBASIC1.53□□□□□ -2.16
HDAC4P56524 AC092991.1-201ENST00000477176 376 ntBASIC1.53□□□□□ -2.16
HDAC4P56524 RNU6-138P-201ENST00000515952 107 ntBASIC1.53□□□□□ -2.16
HDAC4P56524 RNU7-149P-201ENST00000516739 59 ntBASIC1.53□□□□□ -2.16
HDAC4P56524 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.53□□□□□ -2.16
HDAC4P56524 AL160236.1-201ENST00000556317 195 ntBASIC1.53□□□□□ -2.16
HDAC4P56524 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.53□□□□□ -2.16
HDAC4P56524 AC087685.1-201ENST00000587507 141 ntBASIC1.53□□□□□ -2.16
HDAC4P56524 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
HDAC4P56524 snoU2-30.1-201ENST00000365012 70 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 192.1 ms