Protein–RNA interactions for Protein: P56199

ITGA1, Integrin alpha-1, humanhuman

Predictions only

Length 1,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1P56199 MIR29C-201ENST00000385231 88 ntBASIC2.38□□□□□ -2.03
ITGA1P56199 HMGN2P32-201ENST00000444648 269 ntBASIC2.38□□□□□ -2.03
ITGA1P56199 snoU13.15-201ENST00000459407 104 ntBASIC2.38□□□□□ -2.03
ITGA1P56199 COX6CP6-201ENST00000490840 228 ntBASIC2.38□□□□□ -2.03
ITGA1P56199 RNA5SP170-201ENST00000517150 101 ntBASIC2.38□□□□□ -2.03
ITGA1P56199 AC005786.1-201ENST00000588553 154 ntBASIC2.38□□□□□ -2.03
ITGA1P56199 RNU1-58P-201ENST00000362413 163 ntBASIC2.37□□□□□ -2.03
ITGA1P56199 RNA5SP89-201ENST00000410300 108 ntBASIC2.37□□□□□ -2.03
ITGA1P56199 AL445646.1-201ENST00000431784 216 ntBASIC2.37□□□□□ -2.03
ITGA1P56199 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.37□□□□□ -2.03
ITGA1P56199 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.37□□□□□ -2.03
ITGA1P56199 RPS26P48-201ENST00000491713 339 ntBASIC2.37□□□□□ -2.03
ITGA1P56199 RNU6-240P-201ENST00000516098 97 ntBASIC2.37□□□□□ -2.03
ITGA1P56199 RNU6-168P-201ENST00000516189 101 ntBASIC2.37□□□□□ -2.03
ITGA1P56199 RNU6-412P-201ENST00000516434 106 ntBASIC2.37□□□□□ -2.03
ITGA1P56199 RNA5SP402-201ENST00000517148 110 ntBASIC2.37□□□□□ -2.03
ITGA1P56199 MIR4769-201ENST00000584126 77 ntBASIC2.37□□□□□ -2.03
ITGA1P56199 AL137847.3-201ENST00000611521 109 ntBASIC2.37□□□□□ -2.03
ITGA1P56199 uc_338.28-201ENST00000612082 187 ntBASIC2.37□□□□□ -2.03
ITGA1P56199 AC022202.1-201ENST00000613515 211 ntBASIC2.37□□□□□ -2.03
ITGA1P56199 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.37□□□□□ -2.03
ITGA1P56199 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
ITGA1P56199 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.37□□□□□ -2.03
ITGA1P56199 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
ITGA1P56199 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.36□□□□□ -2.03
ITGA1P56199 Y_RNA.116-201ENST00000363292 103 ntBASIC2.36□□□□□ -2.03
ITGA1P56199 Y_RNA.281-201ENST00000364774 94 ntBASIC2.36□□□□□ -2.03
ITGA1P56199 Y_RNA.309-201ENST00000365046 111 ntBASIC2.36□□□□□ -2.03
ITGA1P56199 RNU1-52P-201ENST00000384190 164 ntBASIC2.36□□□□□ -2.03
ITGA1P56199 AL359511.1-201ENST00000402970 211 ntBASIC2.36□□□□□ -2.03
ITGA1P56199 RNU4-53P-201ENST00000410828 140 ntBASIC2.36□□□□□ -2.03
ITGA1P56199 Z98742.3-201ENST00000418637 326 ntBASIC2.36□□□□□ -2.03
ITGA1P56199 STAG3L5P-204ENST00000443759 179 ntBASIC2.36□□□□□ -2.03
ITGA1P56199 SNORD36C-201ENST00000516733 66 ntBASIC2.36□□□□□ -2.03
ITGA1P56199 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
ITGA1P56199 AC007012.1-201ENST00000567192 175 ntBASIC2.36□□□□□ -2.03
ITGA1P56199 AC069114.2-201ENST00000604699 304 ntBASIC2.36□□□□□ -2.03
ITGA1P56199 MIR8054-201ENST00000620877 86 ntBASIC2.36□□□□□ -2.03
ITGA1P56199 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
ITGA1P56199 ZNF720P1-201ENST00000562403 1939 ntBASIC2.36□□□□□ -2.03
ITGA1P56199 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
ITGA1P56199 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
ITGA1P56199 RNA5SP456-201ENST00000364002 114 ntBASIC2.35□□□□□ -2.03
ITGA1P56199 RNU6-440P-201ENST00000390882 105 ntBASIC2.35□□□□□ -2.03
ITGA1P56199 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.35□□□□□ -2.03
ITGA1P56199 RNA5SP425-201ENST00000410336 112 ntBASIC2.35□□□□□ -2.03
ITGA1P56199 AL031737.1-201ENST00000450125 223 ntBASIC2.35□□□□□ -2.03
ITGA1P56199 RNU7-70P-201ENST00000516941 66 ntBASIC2.35□□□□□ -2.03
ITGA1P56199 MIR3126-201ENST00000577443 74 ntBASIC2.35□□□□□ -2.03
ITGA1P56199 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.35□□□□□ -2.03
ITGA1P56199 AC015726.2-201ENST00000620112 122 ntBASIC2.35□□□□□ -2.03
ITGA1P56199 MIR450A1-201ENST00000362262 91 ntBASIC2.34□□□□□ -2.03
ITGA1P56199 RNU6-1019P-201ENST00000364424 107 ntBASIC2.34□□□□□ -2.03
ITGA1P56199 SNORD114-30-201ENST00000364448 72 ntBASIC2.34□□□□□ -2.03
ITGA1P56199 RNU6-690P-201ENST00000365242 106 ntBASIC2.34□□□□□ -2.03
ITGA1P56199 Y_RNA.440-201ENST00000384120 114 ntBASIC2.34□□□□□ -2.03
ITGA1P56199 MIR524-201ENST00000385242 87 ntBASIC2.34□□□□□ -2.03
ITGA1P56199 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.34□□□□□ -2.03
ITGA1P56199 RNU6-938P-201ENST00000411285 103 ntBASIC2.34□□□□□ -2.03
ITGA1P56199 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.34□□□□□ -2.03
ITGA1P56199 BX510359.4-201ENST00000423750 193 ntBASIC2.34□□□□□ -2.03
ITGA1P56199 AC011753.1-201ENST00000451001 220 ntBASIC2.34□□□□□ -2.03
ITGA1P56199 AC084364.2-201ENST00000546924 395 ntBASIC2.34□□□□□ -2.03
ITGA1P56199 SNORA28-201ENST00000606769 126 ntBASIC2.34□□□□□ -2.03
ITGA1P56199 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.34□□□□□ -2.03
ITGA1P56199 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
ITGA1P56199 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
ITGA1P56199 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
ITGA1P56199 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
ITGA1P56199 RNU6-1107P-201ENST00000364817 104 ntBASIC2.33□□□□□ -2.04
ITGA1P56199 RNU1-148P-201ENST00000384472 162 ntBASIC2.33□□□□□ -2.04
ITGA1P56199 AC087499.4-201ENST00000448505 178 ntBASIC2.33□□□□□ -2.04
ITGA1P56199 AC114811.1-201ENST00000507207 168 ntBASIC2.33□□□□□ -2.04
ITGA1P56199 AC234781.5-201ENST00000508429 271 ntBASIC2.33□□□□□ -2.04
ITGA1P56199 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.33□□□□□ -2.04
ITGA1P56199 IGKV3-31-201ENST00000523109 329 ntBASIC2.33□□□□□ -2.04
ITGA1P56199 AP003484.1-201ENST00000530974 250 ntBASIC2.33□□□□□ -2.04
ITGA1P56199 RNU6-349P-201ENST00000362402 107 ntBASIC2.32□□□□□ -2.04
ITGA1P56199 RNU6-1255P-201ENST00000363434 112 ntBASIC2.32□□□□□ -2.04
ITGA1P56199 RNU1-133P-201ENST00000364867 167 ntBASIC2.32□□□□□ -2.04
ITGA1P56199 RNU6-32P-201ENST00000383948 107 ntBASIC2.32□□□□□ -2.04
ITGA1P56199 RNU6-13P-201ENST00000384248 107 ntBASIC2.32□□□□□ -2.04
ITGA1P56199 RNU6-163P-201ENST00000384396 106 ntBASIC2.32□□□□□ -2.04
ITGA1P56199 RNU6-106P-201ENST00000384405 107 ntBASIC2.32□□□□□ -2.04
ITGA1P56199 Y_RNA.495-201ENST00000384435 112 ntBASIC2.32□□□□□ -2.04
ITGA1P56199 RNU6-12P-201ENST00000384604 107 ntBASIC2.32□□□□□ -2.04
ITGA1P56199 RNU6-41P-201ENST00000384741 107 ntBASIC2.32□□□□□ -2.04
ITGA1P56199 SNORD12C-201ENST00000386307 89 ntBASIC2.32□□□□□ -2.04
ITGA1P56199 AC069257.2-201ENST00000441819 155 ntBASIC2.32□□□□□ -2.04
ITGA1P56199 SNORA31.11-201ENST00000516528 139 ntBASIC2.32□□□□□ -2.04
ITGA1P56199 RNY4P20-201ENST00000516678 93 ntBASIC2.32□□□□□ -2.04
ITGA1P56199 SNORA18.7-201ENST00000516910 131 ntBASIC2.32□□□□□ -2.04
ITGA1P56199 MIR5094-201ENST00000578766 85 ntBASIC2.32□□□□□ -2.04
ITGA1P56199 MIR4648-201ENST00000580107 72 ntBASIC2.32□□□□□ -2.04
ITGA1P56199 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
ITGA1P56199 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
ITGA1P56199 MIRLET7C-201ENST00000362160 84 ntBASIC2.31□□□□□ -2.04
ITGA1P56199 Y_RNA.85-201ENST00000363014 111 ntBASIC2.31□□□□□ -2.04
ITGA1P56199 Y_RNA.198-201ENST00000364013 98 ntBASIC2.31□□□□□ -2.04
ITGA1P56199 RNY1P6-201ENST00000384193 109 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms