Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 SNORD14E-201ENST00000364009 85 ntBASIC1.48□□□□□ -2.17
CLCNKAP51800 MIR616-201ENST00000385293 97 ntBASIC1.48□□□□□ -2.17
CLCNKAP51800 MIR891A-201ENST00000401237 79 ntBASIC1.48□□□□□ -2.17
CLCNKAP51800 MIR1304-201ENST00000408243 91 ntBASIC1.48□□□□□ -2.17
CLCNKAP51800 RN7SKP51-201ENST00000410781 304 ntBASIC1.48□□□□□ -2.17
CLCNKAP51800 HSPE1P24-201ENST00000450782 238 ntBASIC1.48□□□□□ -2.17
CLCNKAP51800 AC023449.1-201ENST00000454464 154 ntBASIC1.48□□□□□ -2.17
CLCNKAP51800 RN7SKP164-201ENST00000516138 266 ntBASIC1.48□□□□□ -2.17
CLCNKAP51800 RNU7-149P-201ENST00000516739 59 ntBASIC1.48□□□□□ -2.17
CLCNKAP51800 SNORA31.24-201ENST00000517232 57 ntBASIC1.48□□□□□ -2.17
CLCNKAP51800 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.48□□□□□ -2.17
CLCNKAP51800 AC027279.3-201ENST00000625055 122 ntBASIC1.48□□□□□ -2.17
CLCNKAP51800 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CLCNKAP51800 RNU6-833P-201ENST00000363486 107 ntBASIC1.47□□□□□ -2.17
CLCNKAP51800 RNU6-200P-201ENST00000364743 107 ntBASIC1.47□□□□□ -2.17
CLCNKAP51800 MIR802-201ENST00000390235 94 ntBASIC1.47□□□□□ -2.17
CLCNKAP51800 RNU6-918P-201ENST00000391219 106 ntBASIC1.47□□□□□ -2.17
CLCNKAP51800 AL606845.1-201ENST00000404881 255 ntBASIC1.47□□□□□ -2.17
CLCNKAP51800 Y_RNA.622-201ENST00000411091 108 ntBASIC1.47□□□□□ -2.17
CLCNKAP51800 AP1B1P2-201ENST00000416196 106 ntBASIC1.47□□□□□ -2.17
CLCNKAP51800 RPS29P23-201ENST00000458635 123 ntBASIC1.47□□□□□ -2.17
CLCNKAP51800 AC092991.1-201ENST00000477176 376 ntBASIC1.47□□□□□ -2.17
CLCNKAP51800 AC023790.1-201ENST00000482174 347 ntBASIC1.47□□□□□ -2.17
CLCNKAP51800 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.47□□□□□ -2.17
CLCNKAP51800 SNORD77.4-201ENST00000516158 81 ntBASIC1.47□□□□□ -2.17
CLCNKAP51800 DNAJC19P9-201ENST00000555084 351 ntBASIC1.47□□□□□ -2.17
CLCNKAP51800 AC087685.1-201ENST00000587507 141 ntBASIC1.47□□□□□ -2.17
CLCNKAP51800 AL512598.1-201ENST00000610158 273 ntBASIC1.47□□□□□ -2.17
CLCNKAP51800 AL391903.3-201ENST00000612158 163 ntBASIC1.47□□□□□ -2.17
CLCNKAP51800 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CLCNKAP51800 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.46□□□□□ -2.18
CLCNKAP51800 MIR378A-201ENST00000362177 66 ntBASIC1.46□□□□□ -2.18
CLCNKAP51800 MIR302D-201ENST00000362275 68 ntBASIC1.46□□□□□ -2.18
CLCNKAP51800 Y_RNA.7-201ENST00000362352 102 ntBASIC1.46□□□□□ -2.18
CLCNKAP51800 RNU6-1020P-201ENST00000363684 107 ntBASIC1.46□□□□□ -2.18
CLCNKAP51800 Y_RNA.571-201ENST00000384753 98 ntBASIC1.46□□□□□ -2.18
CLCNKAP51800 MIR526A1-201ENST00000384897 85 ntBASIC1.46□□□□□ -2.18
CLCNKAP51800 RNU6-847P-201ENST00000411115 108 ntBASIC1.46□□□□□ -2.18
CLCNKAP51800 BTF3P4-201ENST00000418852 495 ntBASIC1.46□□□□□ -2.18
CLCNKAP51800 RNA5SP445-201ENST00000515889 115 ntBASIC1.46□□□□□ -2.18
CLCNKAP51800 RNU6-561P-201ENST00000516222 102 ntBASIC1.46□□□□□ -2.18
CLCNKAP51800 AC019176.1-201ENST00000518519 225 ntBASIC1.46□□□□□ -2.18
CLCNKAP51800 AC022559.1-201ENST00000520905 205 ntBASIC1.46□□□□□ -2.18
CLCNKAP51800 RNU6-199P-201ENST00000362954 107 ntBASIC1.45□□□□□ -2.18
CLCNKAP51800 Y_RNA.238-201ENST00000364441 102 ntBASIC1.45□□□□□ -2.18
CLCNKAP51800 MIR516B2-201ENST00000385190 85 ntBASIC1.45□□□□□ -2.18
CLCNKAP51800 AL354695.1-201ENST00000427935 228 ntBASIC1.45□□□□□ -2.18
CLCNKAP51800 HMGN2P32-201ENST00000444648 269 ntBASIC1.45□□□□□ -2.18
CLCNKAP51800 Y_RNA.644-201ENST00000459006 113 ntBASIC1.45□□□□□ -2.18
CLCNKAP51800 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.45□□□□□ -2.18
CLCNKAP51800 RNU6-917P-201ENST00000516294 104 ntBASIC1.45□□□□□ -2.18
CLCNKAP51800 Y_RNA.674-201ENST00000516362 113 ntBASIC1.45□□□□□ -2.18
CLCNKAP51800 Z83818.1-201ENST00000603584 150 ntBASIC1.45□□□□□ -2.18
CLCNKAP51800 AP001485.1-201ENST00000604799 199 ntBASIC1.45□□□□□ -2.18
CLCNKAP51800 AL365434.2-201ENST00000607979 234 ntBASIC1.45□□□□□ -2.18
CLCNKAP51800 Pinc.1-201ENST00000616452 154 ntBASIC1.45□□□□□ -2.18
CLCNKAP51800 Y_RNA.182-201ENST00000363880 111 ntBASIC1.44□□□□□ -2.18
CLCNKAP51800 Y_RNA.336-201ENST00000365307 109 ntBASIC1.44□□□□□ -2.18
CLCNKAP51800 RNU6-1138P-201ENST00000365359 106 ntBASIC1.44□□□□□ -2.18
CLCNKAP51800 RNU6-442P-201ENST00000383968 104 ntBASIC1.44□□□□□ -2.18
CLCNKAP51800 RNU4-70P-201ENST00000384579 139 ntBASIC1.44□□□□□ -2.18
CLCNKAP51800 RNU6-1228P-201ENST00000391014 107 ntBASIC1.44□□□□□ -2.18
CLCNKAP51800 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.44□□□□□ -2.18
CLCNKAP51800 MTND5P15-201ENST00000434246 349 ntBASIC1.44□□□□□ -2.18
CLCNKAP51800 SNRPGP14-201ENST00000435400 219 ntBASIC1.44□□□□□ -2.18
CLCNKAP51800 RNU7-95P-201ENST00000459222 64 ntBASIC1.44□□□□□ -2.18
CLCNKAP51800 RNU6-902P-201ENST00000517212 91 ntBASIC1.44□□□□□ -2.18
CLCNKAP51800 AC090142.3-201ENST00000519012 385 ntBASIC1.44□□□□□ -2.18
CLCNKAP51800 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.44□□□□□ -2.18
CLCNKAP51800 MIR4498-201ENST00000577599 66 ntBASIC1.44□□□□□ -2.18
CLCNKAP51800 MIR4744-201ENST00000581563 82 ntBASIC1.44□□□□□ -2.18
CLCNKAP51800 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.44□□□□□ -2.18
CLCNKAP51800 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CLCNKAP51800 U8.1-201ENST00000362843 134 ntBASIC1.43□□□□□ -2.18
CLCNKAP51800 RNU6-103P-201ENST00000363686 107 ntBASIC1.43□□□□□ -2.18
CLCNKAP51800 SNORD45.3-201ENST00000363836 72 ntBASIC1.43□□□□□ -2.18
CLCNKAP51800 RNU6-268P-201ENST00000364174 107 ntBASIC1.43□□□□□ -2.18
CLCNKAP51800 SNORD1A-201ENST00000364968 72 ntBASIC1.43□□□□□ -2.18
CLCNKAP51800 Y_RNA.486-201ENST00000384398 107 ntBASIC1.43□□□□□ -2.18
CLCNKAP51800 Y_RNA.793-201ENST00000411222 111 ntBASIC1.43□□□□□ -2.18
CLCNKAP51800 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.43□□□□□ -2.18
CLCNKAP51800 SNRPGP8-201ENST00000454064 226 ntBASIC1.43□□□□□ -2.18
CLCNKAP51800 Y_RNA.797-201ENST00000515977 94 ntBASIC1.43□□□□□ -2.18
CLCNKAP51800 snoU13.31-201ENST00000607291 104 ntBASIC1.43□□□□□ -2.18
CLCNKAP51800 AC108706.1-201ENST00000611053 297 ntBASIC1.43□□□□□ -2.18
CLCNKAP51800 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.43□□□□□ -2.18
CLCNKAP51800 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
CLCNKAP51800 AL121890.5-201ENST00000620848 304 ntBASIC1.43□□□□□ -2.18
CLCNKAP51800 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.43□□□□□ -2.18
CLCNKAP51800 ZNF209P-201ENST00000593450 2304 ntBASIC1.43□□□□□ -2.18
CLCNKAP51800 Y_RNA.91-201ENST00000363042 107 ntBASIC1.42□□□□□ -2.18
CLCNKAP51800 Y_RNA.121-201ENST00000363309 113 ntBASIC1.42□□□□□ -2.18
CLCNKAP51800 RNU6-484P-201ENST00000384016 107 ntBASIC1.42□□□□□ -2.18
CLCNKAP51800 RNY3P5-201ENST00000384127 102 ntBASIC1.42□□□□□ -2.18
CLCNKAP51800 MIR452-201ENST00000385020 85 ntBASIC1.42□□□□□ -2.18
CLCNKAP51800 RNU6-578P-201ENST00000390980 103 ntBASIC1.42□□□□□ -2.18
CLCNKAP51800 AC015922.2-201ENST00000435593 184 ntBASIC1.42□□□□□ -2.18
CLCNKAP51800 RNU6-922P-201ENST00000516753 99 ntBASIC1.42□□□□□ -2.18
CLCNKAP51800 AC109810.1-201ENST00000534066 224 ntBASIC1.42□□□□□ -2.18
CLCNKAP51800 FAM106DP-201ENST00000586416 501 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms