Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 Y_RNA.355-201ENST00000365462 98 ntBASIC0.42□□□□□ -2.34
CASP4P49662 MTND1P14-201ENST00000427400 950 ntBASIC0.42□□□□□ -2.34
CASP4P49662 SEPT14P8-201ENST00000508026 178 ntBASIC0.42□□□□□ -2.34
CASP4P49662 RNU2-13P-201ENST00000515909 113 ntBASIC0.42□□□□□ -2.34
CASP4P49662 RNU6-496P-201ENST00000516145 99 ntBASIC0.42□□□□□ -2.34
CASP4P49662 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.42□□□□□ -2.34
CASP4P49662 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.42□□□□□ -2.34
CASP4P49662 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.42□□□□□ -2.34
CASP4P49662 AP000753.3-201ENST00000604083 169 ntBASIC0.42□□□□□ -2.34
CASP4P49662 SNORD113-5-201ENST00000607261 78 ntBASIC0.42□□□□□ -2.34
CASP4P49662 SNORD58B-201ENST00000607313 66 ntBASIC0.42□□□□□ -2.34
CASP4P49662 AC122108.2-201ENST00000611946 526 ntBASIC0.42□□□□□ -2.34
CASP4P49662 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.42□□□□□ -2.34
CASP4P49662 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.42□□□□□ -2.34
CASP4P49662 Y_RNA.143-201ENST00000363520 106 ntBASIC0.41□□□□□ -2.34
CASP4P49662 SNORD18A-201ENST00000363753 72 ntBASIC0.41□□□□□ -2.34
CASP4P49662 RNU6-1048P-201ENST00000364054 107 ntBASIC0.41□□□□□ -2.34
CASP4P49662 RNU4-45P-201ENST00000365469 141 ntBASIC0.41□□□□□ -2.34
CASP4P49662 MIR1278-201ENST00000408753 81 ntBASIC0.41□□□□□ -2.34
CASP4P49662 RNU6-177P-201ENST00000411257 104 ntBASIC0.41□□□□□ -2.34
CASP4P49662 AC236972.2-201ENST00000434979 310 ntBASIC0.41□□□□□ -2.34
CASP4P49662 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.41□□□□□ -2.34
CASP4P49662 MIR4264-201ENST00000583520 66 ntBASIC0.41□□□□□ -2.34
CASP4P49662 MIR6515-201ENST00000619843 57 ntBASIC0.41□□□□□ -2.34
CASP4P49662 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.41□□□□□ -2.34
CASP4P49662 Y_RNA.5-201ENST00000362334 102 ntBASIC0.4□□□□□ -2.35
CASP4P49662 SNORA72.1-201ENST00000363485 129 ntBASIC0.4□□□□□ -2.35
CASP4P49662 RNU6-801P-201ENST00000364087 105 ntBASIC0.4□□□□□ -2.35
CASP4P49662 RNU6-1283P-201ENST00000365314 105 ntBASIC0.4□□□□□ -2.35
CASP4P49662 Y_RNA.471-201ENST00000384312 102 ntBASIC0.4□□□□□ -2.35
CASP4P49662 MIR573-201ENST00000384964 99 ntBASIC0.4□□□□□ -2.35
CASP4P49662 RNU2-14P-201ENST00000411053 191 ntBASIC0.4□□□□□ -2.35
CASP4P49662 RNU6-475P-201ENST00000516073 104 ntBASIC0.4□□□□□ -2.35
CASP4P49662 uc_338.4-201ENST00000616635 176 ntBASIC0.4□□□□□ -2.35
CASP4P49662 AC243994.1-201ENST00000618627 109 ntBASIC0.4□□□□□ -2.35
CASP4P49662 RNU6-369P-201ENST00000362515 102 ntBASIC0.39□□□□□ -2.35
CASP4P49662 MIR140-201ENST00000385282 100 ntBASIC0.39□□□□□ -2.35
CASP4P49662 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.39□□□□□ -2.35
CASP4P49662 AC023449.1-201ENST00000454464 154 ntBASIC0.39□□□□□ -2.35
CASP4P49662 AC107297.1-201ENST00000459991 176 ntBASIC0.39□□□□□ -2.35
CASP4P49662 AC010655.3-201ENST00000478818 450 ntBASIC0.39□□□□□ -2.35
CASP4P49662 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.39□□□□□ -2.35
CASP4P49662 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
CASP4P49662 SNORD45.3-201ENST00000363836 72 ntBASIC0.38□□□□□ -2.35
CASP4P49662 RNU6-899P-201ENST00000363947 107 ntBASIC0.38□□□□□ -2.35
CASP4P49662 Y_RNA.286-201ENST00000364813 102 ntBASIC0.38□□□□□ -2.35
CASP4P49662 RNU6-144P-201ENST00000383951 107 ntBASIC0.38□□□□□ -2.35
CASP4P49662 SNORA26.5-201ENST00000391215 123 ntBASIC0.38□□□□□ -2.35
CASP4P49662 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.38□□□□□ -2.35
CASP4P49662 RNU6-191P-201ENST00000516295 94 ntBASIC0.38□□□□□ -2.35
CASP4P49662 AC040926.1-201ENST00000530195 238 ntBASIC0.38□□□□□ -2.35
CASP4P49662 Y_RNA.222-201ENST00000364264 102 ntBASIC0.37□□□□□ -2.35
CASP4P49662 RNU6-934P-201ENST00000365154 107 ntBASIC0.37□□□□□ -2.35
CASP4P49662 SNORA24-201ENST00000384096 131 ntBASIC0.37□□□□□ -2.35
CASP4P49662 RNU6-125P-201ENST00000384505 107 ntBASIC0.37□□□□□ -2.35
CASP4P49662 RNU6-205P-201ENST00000390858 107 ntBASIC0.37□□□□□ -2.35
CASP4P49662 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.37□□□□□ -2.35
CASP4P49662 snoU13.16-201ENST00000459350 104 ntBASIC0.37□□□□□ -2.35
CASP4P49662 Y_RNA.673-201ENST00000516306 88 ntBASIC0.37□□□□□ -2.35
CASP4P49662 RNU6-977P-201ENST00000516411 103 ntBASIC0.37□□□□□ -2.35
CASP4P49662 PART1_1.1-201ENST00000611761 217 ntBASIC0.37□□□□□ -2.35
CASP4P49662 AC243829.6-201ENST00000612652 106 ntBASIC0.37□□□□□ -2.35
CASP4P49662 MIR5087-201ENST00000635826 76 ntBASIC0.37□□□□□ -2.35
CASP4P49662 Y_RNA.80-201ENST00000362996 102 ntBASIC0.36□□□□□ -2.35
CASP4P49662 Y_RNA.263-201ENST00000364659 114 ntBASIC0.36□□□□□ -2.35
CASP4P49662 RNY1P8-201ENST00000383970 114 ntBASIC0.36□□□□□ -2.35
CASP4P49662 Y_RNA.485-201ENST00000384395 102 ntBASIC0.36□□□□□ -2.35
CASP4P49662 Y_RNA.508-201ENST00000384502 114 ntBASIC0.36□□□□□ -2.35
CASP4P49662 Y_RNA.547-201ENST00000384654 119 ntBASIC0.36□□□□□ -2.35
CASP4P49662 MIR520F-201ENST00000384824 87 ntBASIC0.36□□□□□ -2.35
CASP4P49662 MIR520H-201ENST00000385126 88 ntBASIC0.36□□□□□ -2.35
CASP4P49662 RNU6-130P-201ENST00000411112 103 ntBASIC0.36□□□□□ -2.35
CASP4P49662 AC244023.1-201ENST00000426884 112 ntBASIC0.36□□□□□ -2.35
CASP4P49662 RNU7-25P-201ENST00000516544 62 ntBASIC0.36□□□□□ -2.35
CASP4P49662 AL355297.3-201ENST00000604082 446 ntBASIC0.36□□□□□ -2.35
CASP4P49662 AC242498.1-201ENST00000604134 111 ntBASIC0.36□□□□□ -2.35
CASP4P49662 AC006157.1-201ENST00000611750 366 ntBASIC0.36□□□□□ -2.35
CASP4P49662 AC022140.2-201ENST00000623500 188 ntBASIC0.36□□□□□ -2.35
CASP4P49662 Y_RNA.136-201ENST00000363444 102 ntBASIC0.35□□□□□ -2.35
CASP4P49662 RNU6-1205P-201ENST00000363625 106 ntBASIC0.35□□□□□ -2.35
CASP4P49662 SNORA63C-201ENST00000364578 129 ntBASIC0.35□□□□□ -2.35
CASP4P49662 Y_RNA.269-201ENST00000364685 89 ntBASIC0.35□□□□□ -2.35
CASP4P49662 SNORA50A-201ENST00000384225 134 ntBASIC0.35□□□□□ -2.35
CASP4P49662 RNU6-342P-201ENST00000384521 104 ntBASIC0.35□□□□□ -2.35
CASP4P49662 Y_RNA.529-201ENST00000384586 119 ntBASIC0.35□□□□□ -2.35
CASP4P49662 RNU6-308P-201ENST00000390957 107 ntBASIC0.35□□□□□ -2.35
CASP4P49662 RNU6-1009P-201ENST00000390996 107 ntBASIC0.35□□□□□ -2.35
CASP4P49662 MIR1302-11-201ENST00000408051 138 ntBASIC0.35□□□□□ -2.35
CASP4P49662 MIR1302-9-201ENST00000408365 138 ntBASIC0.35□□□□□ -2.35
CASP4P49662 MIR548O-201ENST00000408583 114 ntBASIC0.35□□□□□ -2.35
CASP4P49662 MIR1302-10-201ENST00000408734 138 ntBASIC0.35□□□□□ -2.35
CASP4P49662 SNORD83.1-201ENST00000411362 77 ntBASIC0.35□□□□□ -2.35
CASP4P49662 snoU13.21-201ENST00000459368 105 ntBASIC0.35□□□□□ -2.35
CASP4P49662 RNU6-1170P-201ENST00000515974 106 ntBASIC0.35□□□□□ -2.35
CASP4P49662 RNU6-875P-201ENST00000516488 106 ntBASIC0.35□□□□□ -2.35
CASP4P49662 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
CASP4P49662 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.35□□□□□ -2.35
CASP4P49662 MIR4771-2-201ENST00000577758 74 ntBASIC0.35□□□□□ -2.35
CASP4P49662 MIR4771-1-201ENST00000582617 74 ntBASIC0.35□□□□□ -2.35
CASP4P49662 MIR1302-2-201ENST00000607096 138 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 151.8 ms