Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 RNA5SP445-201ENST00000515889 115 ntBASIC1.54□□□□□ -2.16
PTPN9P43378 RNU7-149P-201ENST00000516739 59 ntBASIC1.54□□□□□ -2.16
PTPN9P43378 RNU6-388P-201ENST00000517012 105 ntBASIC1.54□□□□□ -2.16
PTPN9P43378 RNU6-389P-201ENST00000517048 105 ntBASIC1.54□□□□□ -2.16
PTPN9P43378 SNORA31.24-201ENST00000517232 57 ntBASIC1.54□□□□□ -2.16
PTPN9P43378 AL160236.1-201ENST00000556317 195 ntBASIC1.54□□□□□ -2.16
PTPN9P43378 AL645939.4-201ENST00000604495 135 ntBASIC1.54□□□□□ -2.16
PTPN9P43378 MIR8063-201ENST00000621930 81 ntBASIC1.54□□□□□ -2.16
PTPN9P43378 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
PTPN9P43378 Y_RNA.7-201ENST00000362352 102 ntBASIC1.53□□□□□ -2.16
PTPN9P43378 Y_RNA.257-201ENST00000364596 102 ntBASIC1.53□□□□□ -2.16
PTPN9P43378 RNU6-1065P-201ENST00000384513 106 ntBASIC1.53□□□□□ -2.16
PTPN9P43378 SNORA26-201ENST00000391286 122 ntBASIC1.53□□□□□ -2.16
PTPN9P43378 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.53□□□□□ -2.16
PTPN9P43378 AC093850.1-201ENST00000454121 251 ntBASIC1.53□□□□□ -2.16
PTPN9P43378 AC023790.1-201ENST00000482174 347 ntBASIC1.53□□□□□ -2.16
PTPN9P43378 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.53□□□□□ -2.16
PTPN9P43378 RNU6-237P-201ENST00000515985 71 ntBASIC1.53□□□□□ -2.16
PTPN9P43378 RNU6-322P-201ENST00000516010 103 ntBASIC1.53□□□□□ -2.16
PTPN9P43378 MIR3124-201ENST00000582636 67 ntBASIC1.53□□□□□ -2.16
PTPN9P43378 AL049861.1-201ENST00000603130 150 ntBASIC1.53□□□□□ -2.16
PTPN9P43378 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
PTPN9P43378 RNU6-457P-201ENST00000363999 107 ntBASIC1.52□□□□□ -2.17
PTPN9P43378 RNU1-42P-201ENST00000364033 160 ntBASIC1.52□□□□□ -2.17
PTPN9P43378 RNU6-200P-201ENST00000364743 107 ntBASIC1.52□□□□□ -2.17
PTPN9P43378 Y_RNA.308-201ENST00000365043 101 ntBASIC1.52□□□□□ -2.17
PTPN9P43378 SNORD38C-201ENST00000384381 69 ntBASIC1.52□□□□□ -2.17
PTPN9P43378 SNORD72-201ENST00000390994 80 ntBASIC1.52□□□□□ -2.17
PTPN9P43378 Y_RNA.587-201ENST00000391210 103 ntBASIC1.52□□□□□ -2.17
PTPN9P43378 SNX2P2-201ENST00000424553 323 ntBASIC1.52□□□□□ -2.17
PTPN9P43378 AL354695.1-201ENST00000427935 228 ntBASIC1.52□□□□□ -2.17
PTPN9P43378 AC092991.1-201ENST00000477176 376 ntBASIC1.52□□□□□ -2.17
PTPN9P43378 SCARNA8-201ENST00000515924 131 ntBASIC1.52□□□□□ -2.17
PTPN9P43378 RNU6-917P-201ENST00000516294 104 ntBASIC1.52□□□□□ -2.17
PTPN9P43378 RNU6-830P-201ENST00000516353 107 ntBASIC1.52□□□□□ -2.17
PTPN9P43378 RNA5SP153-201ENST00000516498 76 ntBASIC1.52□□□□□ -2.17
PTPN9P43378 AC130289.1-201ENST00000577321 73 ntBASIC1.52□□□□□ -2.17
PTPN9P43378 AC078938.1-201ENST00000620993 318 ntBASIC1.52□□□□□ -2.17
PTPN9P43378 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
PTPN9P43378 RNU6-268P-201ENST00000364174 107 ntBASIC1.51□□□□□ -2.17
PTPN9P43378 MIR526A1-201ENST00000384897 85 ntBASIC1.51□□□□□ -2.17
PTPN9P43378 MIR136-201ENST00000385207 82 ntBASIC1.51□□□□□ -2.17
PTPN9P43378 AL606845.1-201ENST00000404881 255 ntBASIC1.51□□□□□ -2.17
PTPN9P43378 RNU4-43P-201ENST00000410628 137 ntBASIC1.51□□□□□ -2.17
PTPN9P43378 AC015922.2-201ENST00000435593 184 ntBASIC1.51□□□□□ -2.17
PTPN9P43378 AC090142.3-201ENST00000519012 385 ntBASIC1.51□□□□□ -2.17
PTPN9P43378 MIR4308-201ENST00000580634 81 ntBASIC1.51□□□□□ -2.17
PTPN9P43378 MIR4303-201ENST00000581299 66 ntBASIC1.51□□□□□ -2.17
PTPN9P43378 MIR4744-201ENST00000581563 82 ntBASIC1.51□□□□□ -2.17
PTPN9P43378 AL365434.2-201ENST00000607979 234 ntBASIC1.51□□□□□ -2.17
PTPN9P43378 Pinc.1-201ENST00000616452 154 ntBASIC1.51□□□□□ -2.17
PTPN9P43378 U8.1-201ENST00000362843 134 ntBASIC1.5□□□□□ -2.17
PTPN9P43378 Y_RNA.238-201ENST00000364441 102 ntBASIC1.5□□□□□ -2.17
PTPN9P43378 RNU6-484P-201ENST00000384016 107 ntBASIC1.5□□□□□ -2.17
PTPN9P43378 Y_RNA.571-201ENST00000384753 98 ntBASIC1.5□□□□□ -2.17
PTPN9P43378 SNORA17.3-201ENST00000391159 129 ntBASIC1.5□□□□□ -2.17
PTPN9P43378 AL451046.2-201ENST00000403074 277 ntBASIC1.5□□□□□ -2.17
PTPN9P43378 RNU1-98P-201ENST00000458992 160 ntBASIC1.5□□□□□ -2.17
PTPN9P43378 RPL30P7-201ENST00000479312 323 ntBASIC1.5□□□□□ -2.17
PTPN9P43378 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.5□□□□□ -2.17
PTPN9P43378 RNU6-453P-201ENST00000516819 85 ntBASIC1.5□□□□□ -2.17
PTPN9P43378 RNU6-902P-201ENST00000517212 91 ntBASIC1.5□□□□□ -2.17
PTPN9P43378 AC097639.2-201ENST00000603159 172 ntBASIC1.5□□□□□ -2.17
PTPN9P43378 RNU6-1020P-201ENST00000363684 107 ntBASIC1.49□□□□□ -2.17
PTPN9P43378 RNU6-728P-201ENST00000365375 104 ntBASIC1.49□□□□□ -2.17
PTPN9P43378 SNORD24-201ENST00000383884 75 ntBASIC1.49□□□□□ -2.17
PTPN9P43378 Y_RNA.785-201ENST00000384290 109 ntBASIC1.49□□□□□ -2.17
PTPN9P43378 MT-TT-201ENST00000387460 66 ntBASIC1.49□□□□□ -2.17
PTPN9P43378 RNU6-918P-201ENST00000391219 106 ntBASIC1.49□□□□□ -2.17
PTPN9P43378 RNU6-493P-201ENST00000391321 108 ntBASIC1.49□□□□□ -2.17
PTPN9P43378 AL138752.1-201ENST00000452964 351 ntBASIC1.49□□□□□ -2.17
PTPN9P43378 RNU6-1299P-201ENST00000516316 100 ntBASIC1.49□□□□□ -2.17
PTPN9P43378 RNY3P16-201ENST00000516338 101 ntBASIC1.49□□□□□ -2.17
PTPN9P43378 MIR3937-201ENST00000580135 106 ntBASIC1.49□□□□□ -2.17
PTPN9P43378 AL357312.1-201ENST00000603879 298 ntBASIC1.49□□□□□ -2.17
PTPN9P43378 AC106754.2-201ENST00000623006 233 ntBASIC1.49□□□□□ -2.17
PTPN9P43378 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
PTPN9P43378 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
PTPN9P43378 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.48□□□□□ -2.17
PTPN9P43378 Y_RNA.274-201ENST00000364714 101 ntBASIC1.48□□□□□ -2.17
PTPN9P43378 Y_RNA.432-201ENST00000384087 111 ntBASIC1.48□□□□□ -2.17
PTPN9P43378 RNU4-70P-201ENST00000384579 139 ntBASIC1.48□□□□□ -2.17
PTPN9P43378 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.48□□□□□ -2.17
PTPN9P43378 RNU6-794P-201ENST00000517261 64 ntBASIC1.48□□□□□ -2.17
PTPN9P43378 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.48□□□□□ -2.17
PTPN9P43378 MIR3671-201ENST00000580455 88 ntBASIC1.48□□□□□ -2.17
PTPN9P43378 GHRLOS.1-201ENST00000610995 70 ntBASIC1.48□□□□□ -2.17
PTPN9P43378 Y_RNA.75-201ENST00000362927 97 ntBASIC1.47□□□□□ -2.17
PTPN9P43378 RNU6-923P-201ENST00000364753 107 ntBASIC1.47□□□□□ -2.17
PTPN9P43378 Y_RNA.297-201ENST00000364950 91 ntBASIC1.47□□□□□ -2.17
PTPN9P43378 Y_RNA.486-201ENST00000384398 107 ntBASIC1.47□□□□□ -2.17
PTPN9P43378 SNORD41-201ENST00000386967 70 ntBASIC1.47□□□□□ -2.17
PTPN9P43378 RNU6-578P-201ENST00000390980 103 ntBASIC1.47□□□□□ -2.17
PTPN9P43378 RPS27P16-201ENST00000425758 201 ntBASIC1.47□□□□□ -2.17
PTPN9P43378 SNRPGP8-201ENST00000454064 226 ntBASIC1.47□□□□□ -2.17
PTPN9P43378 Y_RNA.644-201ENST00000459006 113 ntBASIC1.47□□□□□ -2.17
PTPN9P43378 Y_RNA.674-201ENST00000516362 113 ntBASIC1.47□□□□□ -2.17
PTPN9P43378 RNU6-197P-201ENST00000516680 100 ntBASIC1.47□□□□□ -2.17
PTPN9P43378 RNU6-365P-201ENST00000517113 106 ntBASIC1.47□□□□□ -2.17
PTPN9P43378 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms