Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AL034345.1-201ENST00000407768 123 ntBASIC1.35□□□□□ -2.19
HNF4AP41235 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.35□□□□□ -2.19
HNF4AP41235 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.35□□□□□ -2.19
HNF4AP41235 SNORD11-201ENST00000459124 84 ntBASIC1.35□□□□□ -2.19
HNF4AP41235 RNA5SP168-201ENST00000516642 112 ntBASIC1.35□□□□□ -2.19
HNF4AP41235 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
HNF4AP41235 MIR5688-201ENST00000580619 83 ntBASIC1.35□□□□□ -2.19
HNF4AP41235 MIR2681-201ENST00000581814 105 ntBASIC1.35□□□□□ -2.19
HNF4AP41235 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.35□□□□□ -2.19
HNF4AP41235 AL021707.8-201ENST00000609428 183 ntBASIC1.35□□□□□ -2.19
HNF4AP41235 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
HNF4AP41235 MIR618-201ENST00000385287 98 ntBASIC1.34□□□□□ -2.19
HNF4AP41235 RNU6-482P-201ENST00000391068 107 ntBASIC1.34□□□□□ -2.19
HNF4AP41235 RNU6-918P-201ENST00000391219 106 ntBASIC1.34□□□□□ -2.19
HNF4AP41235 AC245047.8-201ENST00000456455 284 ntBASIC1.34□□□□□ -2.19
HNF4AP41235 RNA5SP61-201ENST00000516453 100 ntBASIC1.34□□□□□ -2.19
HNF4AP41235 MIR3664-201ENST00000579074 99 ntBASIC1.34□□□□□ -2.19
HNF4AP41235 MIR4762-201ENST00000585261 75 ntBASIC1.34□□□□□ -2.19
HNF4AP41235 SNORA28-201ENST00000606769 126 ntBASIC1.34□□□□□ -2.19
HNF4AP41235 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.33□□□□□ -2.2
HNF4AP41235 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
HNF4AP41235 ZNF209P-201ENST00000593450 2304 ntBASIC1.33□□□□□ -2.2
HNF4AP41235 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
HNF4AP41235 RNA5SP327-201ENST00000362494 101 ntBASIC1.33□□□□□ -2.2
HNF4AP41235 U8.5-201ENST00000364528 136 ntBASIC1.33□□□□□ -2.2
HNF4AP41235 SNORD50B-201ENST00000364995 70 ntBASIC1.33□□□□□ -2.2
HNF4AP41235 RNU6-424P-201ENST00000384367 105 ntBASIC1.33□□□□□ -2.2
HNF4AP41235 RNA5SP496-201ENST00000391240 109 ntBASIC1.33□□□□□ -2.2
HNF4AP41235 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.33□□□□□ -2.2
HNF4AP41235 SUMO2P16-201ENST00000519475 264 ntBASIC1.33□□□□□ -2.2
HNF4AP41235 AC022559.1-201ENST00000520905 205 ntBASIC1.33□□□□□ -2.2
HNF4AP41235 MIR3124-201ENST00000582636 67 ntBASIC1.33□□□□□ -2.2
HNF4AP41235 AL049861.1-201ENST00000603130 150 ntBASIC1.33□□□□□ -2.2
HNF4AP41235 AL512598.1-201ENST00000610158 273 ntBASIC1.33□□□□□ -2.2
HNF4AP41235 JPX_2.1-201ENST00000614161 69 ntBASIC1.33□□□□□ -2.2
HNF4AP41235 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.33□□□□□ -2.2
HNF4AP41235 RNU4-17P-201ENST00000365598 141 ntBASIC1.32□□□□□ -2.2
HNF4AP41235 MIR616-201ENST00000385293 97 ntBASIC1.32□□□□□ -2.2
HNF4AP41235 Y_RNA.587-201ENST00000391210 103 ntBASIC1.32□□□□□ -2.2
HNF4AP41235 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.32□□□□□ -2.2
HNF4AP41235 PIGPP3-201ENST00000425307 415 ntBASIC1.32□□□□□ -2.2
HNF4AP41235 MTND5P15-201ENST00000434246 349 ntBASIC1.32□□□□□ -2.2
HNF4AP41235 Y_RNA.644-201ENST00000459006 113 ntBASIC1.32□□□□□ -2.2
HNF4AP41235 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.32□□□□□ -2.2
HNF4AP41235 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.32□□□□□ -2.2
HNF4AP41235 RNU6-561P-201ENST00000516222 102 ntBASIC1.32□□□□□ -2.2
HNF4AP41235 Y_RNA.674-201ENST00000516362 113 ntBASIC1.32□□□□□ -2.2
HNF4AP41235 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.32□□□□□ -2.2
HNF4AP41235 RNU2-4P-201ENST00000606190 192 ntBASIC1.32□□□□□ -2.2
HNF4AP41235 uc_338.4-201ENST00000616635 176 ntBASIC1.32□□□□□ -2.2
HNF4AP41235 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
HNF4AP41235 Y_RNA.238-201ENST00000364441 102 ntBASIC1.31□□□□□ -2.2
HNF4AP41235 MIR758-201ENST00000390227 88 ntBASIC1.31□□□□□ -2.2
HNF4AP41235 RNU6-907P-201ENST00000390924 102 ntBASIC1.31□□□□□ -2.2
HNF4AP41235 SNORD72-201ENST00000390994 80 ntBASIC1.31□□□□□ -2.2
HNF4AP41235 RNU6-131P-201ENST00000391144 107 ntBASIC1.31□□□□□ -2.2
HNF4AP41235 AL606845.1-201ENST00000404881 255 ntBASIC1.31□□□□□ -2.2
HNF4AP41235 SNRPGP8-201ENST00000454064 226 ntBASIC1.31□□□□□ -2.2
HNF4AP41235 AC093850.1-201ENST00000454121 251 ntBASIC1.31□□□□□ -2.2
HNF4AP41235 AC114811.1-201ENST00000507207 168 ntBASIC1.31□□□□□ -2.2
HNF4AP41235 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.31□□□□□ -2.2
HNF4AP41235 RNU7-40P-201ENST00000516397 64 ntBASIC1.31□□□□□ -2.2
HNF4AP41235 Z83818.1-201ENST00000603584 150 ntBASIC1.31□□□□□ -2.2
HNF4AP41235 Y_RNA.7-201ENST00000362352 102 ntBASIC1.3□□□□□ -2.2
HNF4AP41235 RNU6-1084P-201ENST00000362498 107 ntBASIC1.3□□□□□ -2.2
HNF4AP41235 Y_RNA.785-201ENST00000384290 109 ntBASIC1.3□□□□□ -2.2
HNF4AP41235 Y_RNA.571-201ENST00000384753 98 ntBASIC1.3□□□□□ -2.2
HNF4AP41235 BTF3P4-201ENST00000418852 495 ntBASIC1.3□□□□□ -2.2
HNF4AP41235 AL138752.1-201ENST00000452964 351 ntBASIC1.3□□□□□ -2.2
HNF4AP41235 RNU7-95P-201ENST00000459222 64 ntBASIC1.3□□□□□ -2.2
HNF4AP41235 RNU7-12P-201ENST00000516030 62 ntBASIC1.3□□□□□ -2.2
HNF4AP41235 RN7SKP164-201ENST00000516138 266 ntBASIC1.3□□□□□ -2.2
HNF4AP41235 RNU6-1007P-201ENST00000516586 107 ntBASIC1.3□□□□□ -2.2
HNF4AP41235 SNORD45.4-201ENST00000516629 73 ntBASIC1.3□□□□□ -2.2
HNF4AP41235 RNU7-149P-201ENST00000516739 59 ntBASIC1.3□□□□□ -2.2
HNF4AP41235 SNORA81.3-201ENST00000517283 198 ntBASIC1.3□□□□□ -2.2
HNF4AP41235 MIR4778-201ENST00000577635 80 ntBASIC1.3□□□□□ -2.2
HNF4AP41235 AC008507.4-201ENST00000585464 127 ntBASIC1.3□□□□□ -2.2
HNF4AP41235 AC120024.3-201ENST00000603167 156 ntBASIC1.3□□□□□ -2.2
HNF4AP41235 AC004792.1-201ENST00000614523 137 ntBASIC1.3□□□□□ -2.2
HNF4AP41235 AL513423.1-201ENST00000621695 132 ntBASIC1.3□□□□□ -2.2
HNF4AP41235 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.3□□□□□ -2.2
HNF4AP41235 MIR378A-201ENST00000362177 66 ntBASIC1.29□□□□□ -2.2
HNF4AP41235 RNU6-1020P-201ENST00000363684 107 ntBASIC1.29□□□□□ -2.2
HNF4AP41235 RNU6-163P-201ENST00000384396 106 ntBASIC1.29□□□□□ -2.2
HNF4AP41235 MIR660-201ENST00000385235 97 ntBASIC1.29□□□□□ -2.2
HNF4AP41235 Y_RNA.793-201ENST00000411222 111 ntBASIC1.29□□□□□ -2.2
HNF4AP41235 AL133373.1-201ENST00000497098 94 ntBASIC1.29□□□□□ -2.2
HNF4AP41235 SNORD77.4-201ENST00000516158 81 ntBASIC1.29□□□□□ -2.2
HNF4AP41235 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.29□□□□□ -2.2
HNF4AP41235 MIR4744-201ENST00000581563 82 ntBASIC1.29□□□□□ -2.2
HNF4AP41235 AP000942.3-201ENST00000603702 160 ntBASIC1.29□□□□□ -2.2
HNF4AP41235 AL391903.3-201ENST00000612158 163 ntBASIC1.29□□□□□ -2.2
HNF4AP41235 Pinc.1-201ENST00000616452 154 ntBASIC1.29□□□□□ -2.2
HNF4AP41235 SNORD3E-202ENST00000627253 216 ntBASIC1.29□□□□□ -2.2
HNF4AP41235 Y_RNA.29-201ENST00000362570 113 ntBASIC1.28□□□□□ -2.2
HNF4AP41235 RNU6-833P-201ENST00000363486 107 ntBASIC1.28□□□□□ -2.2
HNF4AP41235 Y_RNA.435-201ENST00000384095 112 ntBASIC1.28□□□□□ -2.2
HNF4AP41235 Y_RNA.486-201ENST00000384398 107 ntBASIC1.28□□□□□ -2.2
HNF4AP41235 RNU6-578P-201ENST00000390980 103 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms