Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 RNU6-806P-201ENST00000365147 105 ntBASIC1.12□□□□□ -2.23
HADHAP40939 MIR526A2-201ENST00000390198 65 ntBASIC1.12□□□□□ -2.23
HADHAP40939 BTF3P11-201ENST00000426582 477 ntBASIC1.12□□□□□ -2.23
HADHAP40939 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.12□□□□□ -2.23
HADHAP40939 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.12□□□□□ -2.23
HADHAP40939 RNU6-1338P-201ENST00000516328 91 ntBASIC1.12□□□□□ -2.23
HADHAP40939 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.12□□□□□ -2.23
HADHAP40939 AC006504.6-201ENST00000590142 199 ntBASIC1.12□□□□□ -2.23
HADHAP40939 AL021707.8-201ENST00000609428 183 ntBASIC1.12□□□□□ -2.23
HADHAP40939 AC022140.2-201ENST00000623500 188 ntBASIC1.12□□□□□ -2.23
HADHAP40939 MIR103A2-201ENST00000362154 78 ntBASIC1.11□□□□□ -2.23
HADHAP40939 RNU6-1138P-201ENST00000365359 106 ntBASIC1.11□□□□□ -2.23
HADHAP40939 Y_RNA.508-201ENST00000384502 114 ntBASIC1.11□□□□□ -2.23
HADHAP40939 RNU6-713P-201ENST00000384761 107 ntBASIC1.11□□□□□ -2.23
HADHAP40939 RNU6-1109P-201ENST00000391187 107 ntBASIC1.11□□□□□ -2.23
HADHAP40939 MIR1278-201ENST00000408753 81 ntBASIC1.11□□□□□ -2.23
HADHAP40939 RNU6-1203P-201ENST00000410703 110 ntBASIC1.11□□□□□ -2.23
HADHAP40939 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.11□□□□□ -2.23
HADHAP40939 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.11□□□□□ -2.23
HADHAP40939 MIR4452-201ENST00000583004 71 ntBASIC1.11□□□□□ -2.23
HADHAP40939 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.11□□□□□ -2.23
HADHAP40939 AC136443.5-201ENST00000603741 370 ntBASIC1.11□□□□□ -2.23
HADHAP40939 uc_338.4-201ENST00000616635 176 ntBASIC1.11□□□□□ -2.23
HADHAP40939 SNORD114-24-201ENST00000365029 72 ntBASIC1.1□□□□□ -2.23
HADHAP40939 AL603910.2-201ENST00000407268 136 ntBASIC1.1□□□□□ -2.23
HADHAP40939 AC087343.1-201ENST00000477341 475 ntBASIC1.1□□□□□ -2.23
HADHAP40939 RPS26P48-201ENST00000491713 339 ntBASIC1.1□□□□□ -2.23
HADHAP40939 RNU7-41P-201ENST00000515917 61 ntBASIC1.1□□□□□ -2.23
HADHAP40939 MIR4661-201ENST00000582720 75 ntBASIC1.1□□□□□ -2.23
HADHAP40939 MIR4295-201ENST00000585286 85 ntBASIC1.1□□□□□ -2.23
HADHAP40939 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.1□□□□□ -2.23
HADHAP40939 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.1□□□□□ -2.23
HADHAP40939 AC008133.2-201ENST00000624540 351 ntBASIC1.1□□□□□ -2.23
HADHAP40939 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
HADHAP40939 Y_RNA.26-201ENST00000362539 101 ntBASIC1.09□□□□□ -2.23
HADHAP40939 Y_RNA.293-201ENST00000364908 93 ntBASIC1.09□□□□□ -2.23
HADHAP40939 RNU6-662P-201ENST00000384253 104 ntBASIC1.09□□□□□ -2.23
HADHAP40939 SNORD72-201ENST00000390994 80 ntBASIC1.09□□□□□ -2.23
HADHAP40939 U8.17-201ENST00000391292 132 ntBASIC1.09□□□□□ -2.23
HADHAP40939 MRPL35P3-201ENST00000421557 364 ntBASIC1.09□□□□□ -2.23
HADHAP40939 snoU13.25-201ENST00000458945 104 ntBASIC1.09□□□□□ -2.23
HADHAP40939 COX6CP14-201ENST00000469580 174 ntBASIC1.09□□□□□ -2.23
HADHAP40939 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.09□□□□□ -2.23
HADHAP40939 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.09□□□□□ -2.23
HADHAP40939 SCARNA8-201ENST00000515924 131 ntBASIC1.09□□□□□ -2.23
HADHAP40939 RN7SKP164-201ENST00000516138 266 ntBASIC1.09□□□□□ -2.23
HADHAP40939 MIR548AR-201ENST00000582191 57 ntBASIC1.09□□□□□ -2.23
HADHAP40939 Y_RNA.802-201ENST00000614892 130 ntBASIC1.09□□□□□ -2.23
HADHAP40939 SEPT14P17-201ENST00000617978 177 ntBASIC1.09□□□□□ -2.23
HADHAP40939 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
HADHAP40939 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
HADHAP40939 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.08□□□□□ -2.24
HADHAP40939 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
HADHAP40939 AC008163.1-202ENST00000636004 2889 ntBASIC1.08□□□□□ -2.24
HADHAP40939 SNORA63-201ENST00000363450 132 ntBASIC1.08□□□□□ -2.24
HADHAP40939 Y_RNA.275-201ENST00000364726 110 ntBASIC1.08□□□□□ -2.24
HADHAP40939 SNORA22-201ENST00000383907 134 ntBASIC1.08□□□□□ -2.24
HADHAP40939 SNORA22C-201ENST00000384614 134 ntBASIC1.08□□□□□ -2.24
HADHAP40939 Y_RNA.537-201ENST00000384626 109 ntBASIC1.08□□□□□ -2.24
HADHAP40939 SNORA75.2-201ENST00000391138 150 ntBASIC1.08□□□□□ -2.24
HADHAP40939 SNORA75.3-201ENST00000391231 150 ntBASIC1.08□□□□□ -2.24
HADHAP40939 MIR4251-201ENST00000635819 61 ntBASIC1.08□□□□□ -2.24
HADHAP40939 Y_RNA.16-201ENST00000362421 102 ntBASIC1.07□□□□□ -2.24
HADHAP40939 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.07□□□□□ -2.24
HADHAP40939 POLR2J4-204ENST00000418424 324 ntBASIC1.07□□□□□ -2.24
HADHAP40939 TRBVB-201ENST00000477100 408 ntBASIC1.07□□□□□ -2.24
HADHAP40939 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.07□□□□□ -2.24
HADHAP40939 RNU7-149P-201ENST00000516739 59 ntBASIC1.07□□□□□ -2.24
HADHAP40939 RNU6-1153P-201ENST00000516760 105 ntBASIC1.07□□□□□ -2.24
HADHAP40939 AP003072.1-201ENST00000531740 145 ntBASIC1.07□□□□□ -2.24
HADHAP40939 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.07□□□□□ -2.24
HADHAP40939 AL078603.1-201ENST00000603824 313 ntBASIC1.07□□□□□ -2.24
HADHAP40939 AC015726.2-201ENST00000620112 122 ntBASIC1.07□□□□□ -2.24
HADHAP40939 snoU18.1-201ENST00000629629 71 ntBASIC1.07□□□□□ -2.24
HADHAP40939 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
HADHAP40939 MIR335-201ENST00000362173 94 ntBASIC1.06□□□□□ -2.24
HADHAP40939 SNORD114-22-201ENST00000365423 72 ntBASIC1.06□□□□□ -2.24
HADHAP40939 Y_RNA.355-201ENST00000365462 98 ntBASIC1.06□□□□□ -2.24
HADHAP40939 RNU6-1160P-201ENST00000384546 104 ntBASIC1.06□□□□□ -2.24
HADHAP40939 SNORA8.3-201ENST00000384679 139 ntBASIC1.06□□□□□ -2.24
HADHAP40939 RNU6-383P-201ENST00000410864 94 ntBASIC1.06□□□□□ -2.24
HADHAP40939 snoU13.18-201ENST00000459483 104 ntBASIC1.06□□□□□ -2.24
HADHAP40939 SNORD77.4-201ENST00000516158 81 ntBASIC1.06□□□□□ -2.24
HADHAP40939 Y_RNA.720-201ENST00000517166 92 ntBASIC1.06□□□□□ -2.24
HADHAP40939 AC006006.1-201ENST00000603082 144 ntBASIC1.06□□□□□ -2.24
HADHAP40939 AC103810.9-201ENST00000606688 112 ntBASIC1.06□□□□□ -2.24
HADHAP40939 AL008718.3-201ENST00000610217 321 ntBASIC1.06□□□□□ -2.24
HADHAP40939 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
HADHAP40939 Y_RNA.44-201ENST00000362676 108 ntBASIC1.05□□□□□ -2.24
HADHAP40939 Y_RNA.326-201ENST00000365176 113 ntBASIC1.05□□□□□ -2.24
HADHAP40939 MIR1185-1-201ENST00000408598 86 ntBASIC1.05□□□□□ -2.24
HADHAP40939 RNU6-847P-201ENST00000411115 108 ntBASIC1.05□□□□□ -2.24
HADHAP40939 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.05□□□□□ -2.24
HADHAP40939 FABP5P4-201ENST00000437203 171 ntBASIC1.05□□□□□ -2.24
HADHAP40939 MTCO2P24-201ENST00000515611 426 ntBASIC1.05□□□□□ -2.24
HADHAP40939 RNU4-57P-201ENST00000515980 135 ntBASIC1.05□□□□□ -2.24
HADHAP40939 SNORD114-21-201ENST00000606412 72 ntBASIC1.05□□□□□ -2.24
HADHAP40939 Y_RNA.812-201ENST00000610788 101 ntBASIC1.05□□□□□ -2.24
HADHAP40939 Y_RNA.784-201ENST00000613803 101 ntBASIC1.05□□□□□ -2.24
HADHAP40939 Y_RNA.787-201ENST00000616522 101 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms